simonduerr commited on
Commit
c10a0ce
1 Parent(s): e4eb08d

Update app.py

Browse files
Files changed (1) hide show
  1. app.py +13 -13
app.py CHANGED
@@ -1268,8 +1268,8 @@ with proteinMPNN:
1268
  minimum=1, maximum=15, value=1, step=1, label="Number of sequences"
1269
  )
1270
  sampling_temp = gr.Radio(
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- choices=[0.1, 0.15, 0.2, 0.25, 0.3],
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- value=0.1,
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  label="Sampling temperature",
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  )
1275
  gr.Markdown(
@@ -1290,7 +1290,7 @@ with proteinMPNN:
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  value="vanilla—v_48_020",
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  )
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  backbone_noise = gr.Dropdown(
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- choices=[0, 0.02, 0.10, 0.20, 0.30], label="Backbone noise", value=0
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  )
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  with gr.Row():
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  homomer = gr.Checkbox(value=False, label="Homomer?")
@@ -1337,17 +1337,17 @@ with proteinMPNN:
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  atomsel,
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  ],
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  samples=[
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- ["Homomer design", "1O91", "A,B,C", "", True, 2, 0.1, ""],
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- ["Monomer design", "6MRR", "A", "", False, 2, 0.1, ""],
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- ["Redesign of Homomer to Heteromer", "3HTN", "A,B", "C", False, 2, 0.1, ""],
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  [
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  "Redesign of MID1 scaffold keeping binding site fixed",
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  "3V1C",
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  "A,B",
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  "",
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  False,
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- 2,
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- 0.1,
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  "within 5 of resname ZN",
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  ],
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  [
@@ -1356,8 +1356,8 @@ with proteinMPNN:
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  "A,B",
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  "",
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  False,
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- 2,
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- 0.1,
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  "within 8 of nucleic",
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  ],
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  [
@@ -1366,8 +1366,8 @@ with proteinMPNN:
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  "A,B",
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  "",
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  False,
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- 2,
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- 0.1,
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  "chain B or (chain A and sasa < 20)",
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  ],
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  ],
@@ -1407,7 +1407,7 @@ with proteinMPNN:
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  visible=False,
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  )
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  num_recycles = gr.Dropdown(
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- choices=[0, 1, 3, 5], value=3, label="num Recycles"
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  )
1412
  btnAF = gr.Button("Run AlphaFold on all sequences")
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  with gr.Row():
 
1268
  minimum=1, maximum=15, value=1, step=1, label="Number of sequences"
1269
  )
1270
  sampling_temp = gr.Radio(
1271
+ choices=["0.1", "0.15", "0.2", "0.25", "0.3"],
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+ value="0.1",
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  label="Sampling temperature",
1274
  )
1275
  gr.Markdown(
 
1290
  value="vanilla—v_48_020",
1291
  )
1292
  backbone_noise = gr.Dropdown(
1293
+ choices=["0", "0.02", "0.10", "0.20", "0.30"], label="Backbone noise", value="0"
1294
  )
1295
  with gr.Row():
1296
  homomer = gr.Checkbox(value=False, label="Homomer?")
 
1337
  atomsel,
1338
  ],
1339
  samples=[
1340
+ ["Homomer design", "1O91", "A,B,C", "", True, "2", "0.1", ""],
1341
+ ["Monomer design", "6MRR", "A", "", False, "2", "0.1", ""],
1342
+ ["Redesign of Homomer to Heteromer", "3HTN", "A,B", "C", False, "2", "0.1", ""],
1343
  [
1344
  "Redesign of MID1 scaffold keeping binding site fixed",
1345
  "3V1C",
1346
  "A,B",
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  "",
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  False,
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+ "2",
1350
+ "0.1",
1351
  "within 5 of resname ZN",
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  ],
1353
  [
 
1356
  "A,B",
1357
  "",
1358
  False,
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+ "2",
1360
+ "0.1",
1361
  "within 8 of nucleic",
1362
  ],
1363
  [
 
1366
  "A,B",
1367
  "",
1368
  False,
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+ "2",
1370
+ "0.1",
1371
  "chain B or (chain A and sasa < 20)",
1372
  ],
1373
  ],
 
1407
  visible=False,
1408
  )
1409
  num_recycles = gr.Dropdown(
1410
+ choices=["0", "1", "3", "5"], value="3", label="num Recycles"
1411
  )
1412
  btnAF = gr.Button("Run AlphaFold on all sequences")
1413
  with gr.Row():