Joshua Kravitz
Initial commit
e284167
{
"task": {
"id": "rpob_bac_dna_phylogeny",
"display_name": "RpoB Bacterial Phylogeny",
"description": "Evaluate on RpoB phylogeny distance correlation task for Bacterial DNA sequences.",
"modality": "dna",
"type": "eds",
"datasets": [
{
"path": "tattabio/rpob_bac_dna_phylogeny_sequences",
"revision": "8e137d3fb8886d8739ce08d1918745444c7d30d6"
},
{
"path": "tattabio/rpob_bac_dna_phylogeny_distances",
"revision": "67339e271b2a1602208153d53d70d35ba6fa8876"
}
],
"primary_metric_id": "top_corr"
},
"model": {
"hf_name": "InstaDeepAI/nucleotide-transformer-v2-250m-multi-species",
"revision": "...",
"num_layers": 24,
"num_params": 235120780,
"embed_dim": 768
},
"dgeb_version": "0.0.0",
"results": [
{
"layer_number": 12,
"layer_display_name": "12",
"metrics": [
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"value": 0.07392689866136973
},
{
"id": "manhattan",
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"value": 0.08180489841927971
},
{
"id": "euclidean",
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"value": 0.08993373294524076
},
{
"id": "top_corr",
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}
]
},
{
"layer_number": 23,
"layer_display_name": "23",
"metrics": [
{
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"description": null,
"value": 0.1196418634913048
},
{
"id": "manhattan",
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"value": 0.11994664883382657
},
{
"id": "euclidean",
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},
{
"id": "top_corr",
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}
]
}
]
}