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import subprocess |
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import time |
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from pathlib import Path |
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from typing import List, Dict, Tuple, Union |
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import gradio as gr |
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import numpy as np |
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import pandas as pd |
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import requests |
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from symptoms_categories import SYMPTOMS_LIST |
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from utils import ( |
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CLIENT_DIR, |
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INPUT_BROWSER_LIMIT, |
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KEYS_DIR, |
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DEPLOYMENT_DIR, |
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CURRENT_DIR, |
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SERVER_URL, |
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TARGET_COLUMNS, |
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TRAINING_FILENAME, |
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clean_directory, |
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get_disease_name, |
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load_data, |
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pretty_print, |
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) |
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from concrete.ml.deployment import FHEModelClient |
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subprocess.Popen(["uvicorn", "server:app"], cwd=CURRENT_DIR) |
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time.sleep(3) |
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def is_nan(inputs): |
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return inputs is None or (inputs is not None and len(inputs) < 1) |
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def get_user_symptoms_from_checkboxgroup(checkbox_symptoms) -> np.array: |
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symptoms_vector = {key: 0 for key in valid_columns} |
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for pretty_symptom in checkbox_symptoms: |
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original_symptom = "_".join((pretty_symptom.lower().split(" "))) |
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if original_symptom not in symptoms_vector.keys(): |
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raise KeyError( |
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f"The symptom '{original_symptom}' you provided is not recognized as a valid " |
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f"symptom.\nHere is the list of valid symptoms: {symptoms_vector}" |
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) |
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symptoms_vector[original_symptom] = 1 |
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user_symptoms_vect = np.fromiter(symptoms_vector.values(), dtype=float)[np.newaxis, :] |
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assert all(value == 0 or value == 1 for value in user_symptoms_vect.flatten()) |
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return user_symptoms_vect |
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def fill_in_fn(default_disease, *checkbox_symptoms): |
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df = pd.read_csv(TRAINING_FILENAME) |
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df_filtred = df[df[TARGET_COLUMNS[1]] == default_disease] |
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symptoms = pretty_print(df_filtred.columns[df_filtred.eq(1).any()].to_list()) |
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if any(lst for lst in checkbox_symptoms if lst): |
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for sublist in checkbox_symptoms: |
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symptoms.extend(sublist) |
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return {box: symptoms for box in check_boxes} |
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def get_features(*checked_symptoms): |
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if not any(lst for lst in checked_symptoms if lst): |
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return { |
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error_box1: gr.update( |
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visible=True, value="Enter a default disease or select your own symptoms" |
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), |
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} |
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return { |
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error_box1: gr.update(visible=False), |
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user_vect_box1: get_user_symptoms_from_checkboxgroup(pretty_print(checked_symptoms)), |
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} |
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def key_gen_fn(user_symptoms: List[str]) -> Dict: |
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""" |
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Generate keys for a given user. |
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Args: |
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user_symptoms (List[str]): The vector symptoms provided by the user. |
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Returns: |
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dict: A dictionary containing the generated keys and related information. |
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""" |
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clean_directory() |
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if is_nan(user_symptoms): |
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print("Error: Please submit your symptoms or select a default disease.") |
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return { |
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error_box2: gr.update(visible=True, value="Please submit your symptoms first"), |
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} |
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user_id = np.random.randint(0, 2**32) |
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print(f"Your user ID is: {user_id}....") |
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client = FHEModelClient(path_dir=DEPLOYMENT_DIR, key_dir=KEYS_DIR / f"{user_id}") |
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client.load() |
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client.generate_private_and_evaluation_keys() |
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serialized_evaluation_keys = client.get_serialized_evaluation_keys() |
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assert isinstance(serialized_evaluation_keys, bytes) |
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evaluation_key_path = KEYS_DIR / f"{user_id}/evaluation_key" |
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with evaluation_key_path.open("wb") as f: |
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f.write(serialized_evaluation_keys) |
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serialized_evaluation_keys_shorten_hex = serialized_evaluation_keys.hex()[:INPUT_BROWSER_LIMIT] |
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return { |
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error_box2: gr.update(visible=False), |
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key_box: serialized_evaluation_keys_shorten_hex, |
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user_id_box: user_id, |
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key_len_box: f"{len(serialized_evaluation_keys) / (10**6):.2f} MB", |
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} |
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def encrypt_fn(user_symptoms, user_id): |
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if is_nan(user_id) or is_nan(user_symptoms): |
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print("Error in encryption step: Provide your symptoms and generate the evaluation keys.") |
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return { |
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error_box3: gr.update( |
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visible=True, value="Please provide your symptoms and generate the evaluation keys." |
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) |
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} |
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client = FHEModelClient(path_dir=DEPLOYMENT_DIR, key_dir=KEYS_DIR / f"{user_id}") |
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client.load() |
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user_symptoms = np.fromstring(user_symptoms[2:-2], dtype=int, sep=".").reshape(1, -1) |
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quant_user_symptoms = client.model.quantize_input(user_symptoms) |
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encrypted_quantized_user_symptoms = client.quantize_encrypt_serialize(user_symptoms) |
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assert isinstance(encrypted_quantized_user_symptoms, bytes) |
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encrypted_input_path = KEYS_DIR / f"{user_id}/encrypted_symptoms" |
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with encrypted_input_path.open("wb") as f: |
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f.write(encrypted_quantized_user_symptoms) |
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encrypted_quantized_user_symptoms_shorten_hex = encrypted_quantized_user_symptoms.hex()[ |
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:INPUT_BROWSER_LIMIT |
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] |
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return { |
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error_box3: gr.update(visible=False), |
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user_vect_box2: user_symptoms, |
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quant_vect_box: quant_user_symptoms, |
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enc_vect_box: encrypted_quantized_user_symptoms_shorten_hex, |
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} |
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def send_input_fn(user_id, user_symptoms): |
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"""Send the encrypted data and the evaluation key to the server. |
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Args: |
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user_id (int): The current user's ID |
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user_symptoms (numpy.ndarray): The user symptoms |
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""" |
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if is_nan(user_id) or is_nan(user_symptoms): |
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return { |
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error_box4: gr.update( |
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visible=True, |
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value="Please ensure that the evaluation key has been generated " |
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"and the symptoms have been submitted before sending the data to the server", |
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) |
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} |
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evaluation_key_path = KEYS_DIR / f"{user_id}/evaluation_key" |
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encrypted_input_path = KEYS_DIR / f"{user_id}/encrypted_symptoms" |
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if not evaluation_key_path.is_file(): |
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print( |
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"Error Encountered While Sending Data to the Server: " |
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f"The key has been generated correctly - {evaluation_key_path.is_file()=}" |
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) |
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return {error_box4: gr.update(visible=True, value="Please generate the private key first.")} |
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if not encrypted_input_path.is_file(): |
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print( |
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"Error Encountered While Sending Data to the Server: The data has not been encrypted " |
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f"correctly on the client side - {encrypted_input_path.is_file()=}" |
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) |
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return { |
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error_box4: gr.update( |
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visible=True, |
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value="Please encrypt the data with the private key first.", |
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), |
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} |
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data = { |
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"user_id": user_id, |
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"filter": user_symptoms, |
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} |
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files = [ |
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("files", open(encrypted_input_path, "rb")), |
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("files", open(evaluation_key_path, "rb")), |
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] |
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url = SERVER_URL + "send_input" |
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with requests.post( |
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url=url, |
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data=data, |
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files=files, |
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) as response: |
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print(f"Sending Data: {response.ok=}") |
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return {error_box4: gr.update(visible=False), srv_resp_send_data_box: "Data sent"} |
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def run_fhe_fn(user_id): |
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"""Send the encrypted input image as well as the evaluation key to the server. |
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Args: |
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user_id (int): The current user's ID. |
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filter_name (str): The current filter to consider. |
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""" |
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if is_nan(user_id): |
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return { |
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error_box5: gr.update( |
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visible=True, |
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value="Please ensure that the evaluation key has been generated " |
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"and the symptoms have been submitted before sending the data to the server", |
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) |
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} |
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data = { |
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"user_id": user_id, |
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} |
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url = SERVER_URL + "run_fhe" |
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with requests.post( |
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url=url, |
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data=data, |
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) as response: |
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if not response.ok: |
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return { |
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error_box5: gr.update(visible=True, value="Please wait."), |
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fhe_execution_time_box: gr.update(visible=True), |
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} |
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else: |
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print(f"response.ok: {response.ok}, {response.json()} - Computed") |
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return { |
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error_box5: gr.update(visible=False), |
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fhe_execution_time_box: gr.update(value=f"{response.json()} seconds"), |
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} |
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def get_output_fn(user_id, user_symptoms): |
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if is_nan(user_id) or is_nan(user_symptoms): |
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return { |
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error_box6: gr.update( |
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visible=True, |
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value="Please ensure that the evaluation key has been generated " |
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"and the symptoms have been submitted before sending the data to the server", |
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) |
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} |
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data = { |
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"user_id": user_id, |
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} |
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url = SERVER_URL + "get_output" |
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with requests.post( |
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url=url, |
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data=data, |
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) as response: |
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if response.ok: |
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print(f"Receive Data: {response.ok=}") |
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encrypted_output = response.content |
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encrypted_output_path = CLIENT_DIR / f"{user_id}_encrypted_output" |
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with encrypted_output_path.open("wb") as f: |
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f.write(encrypted_output) |
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return {error_box6: gr.update(visible=False), srv_resp_retrieve_data_box: "Data received"} |
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def decrypt_fn(user_id, user_symptoms): |
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if is_nan(user_id) or is_nan(user_symptoms): |
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return { |
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error_box7: gr.update( |
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visible=True, |
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value="Please ensure that the symptoms have been submitted and the evaluation " |
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"key has been generated", |
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) |
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} |
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encrypted_output_path = CLIENT_DIR / f"{user_id}_encrypted_output" |
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if not encrypted_output_path.is_file(): |
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print("Error in decryption step: Please run the FHE execution, first.") |
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return { |
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error_box7: gr.update( |
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visible=True, |
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value="Please ensure that the symptoms have been submitted, the evaluation " |
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"key has been generated and step 5 and 6 have been performed on the Server " |
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"side before decrypting the prediction", |
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) |
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} |
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with encrypted_output_path.open("rb") as f: |
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encrypted_output = f.read() |
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client = FHEModelClient(path_dir=DEPLOYMENT_DIR, key_dir=KEYS_DIR / f"{user_id}") |
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client.load() |
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output = client.deserialize_decrypt_dequantize(encrypted_output) |
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return { |
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error_box7: gr.update(visible=False), |
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decrypt_target_box: get_disease_name(output.argmax()), |
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} |
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def clear_all_btn(): |
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"""Clear all the box outputs.""" |
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clean_directory() |
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return { |
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disease_box: None, |
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user_id_box: None, |
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user_vect_box1: None, |
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user_vect_box2: None, |
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quant_vect_box: None, |
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enc_vect_box: None, |
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key_box: None, |
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key_len_box: None, |
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fhe_execution_time_box: None, |
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decrypt_target_box: None, |
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error_box7: gr.update(visible=False), |
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error_box1: gr.update(visible=False), |
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error_box2: gr.update(visible=False), |
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error_box3: gr.update(visible=False), |
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error_box4: gr.update(visible=False), |
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error_box5: gr.update(visible=False), |
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error_box6: gr.update(visible=False), |
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srv_resp_send_data_box: None, |
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srv_resp_retrieve_data_box: None, |
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**{box: None for box in check_boxes}, |
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} |
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CSS = """ |
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#them {color: orange} |
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#them {font-size: 25px} |
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#them {font-weight: bold} |
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.gradio-container {background-color: white} |
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.feedback {font-size: 3px !important} |
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/* #them {text-align: center} */ |
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""" |
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|
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if __name__ == "__main__": |
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print("Starting demo ...") |
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clean_directory() |
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(_, X_train, X_test), (df_test, y_train, y_test) = load_data() |
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valid_columns = X_train.columns.to_list() |
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with gr.Blocks(css=CSS) as demo: |
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gr.Markdown( |
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""" |
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<p align="center"> |
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<img width=200 src="https://user-images.githubusercontent.com/5758427/197816413-d9cddad3-ba38-4793-847d-120975e1da11.png"> |
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</p> |
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|
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<h2 align="center">Health Prediction On Encrypted Data Using Fully Homomorphic Encryption.</h2> |
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|
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<p align="center"> |
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<a href="https://github.com/zama-ai/concrete-ml"> <img style="vertical-align: middle; display:inline-block; margin-right: 3px;" width=15 src="https://user-images.githubusercontent.com/5758427/197972109-faaaff3e-10e2-4ab6-80f5-7531f7cfb08f.png">Concrete-ML</a> |
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— |
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<a href="https://docs.zama.ai/concrete-ml"> <img style="vertical-align: middle; display:inline-block; margin-right: 3px;" width=15 src="https://user-images.githubusercontent.com/5758427/197976802-fddd34c5-f59a-48d0-9bff-7ad1b00cb1fb.png">Documentation</a> |
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— |
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<a href="https://zama.ai/community"> <img style="vertical-align: middle; display:inline-block; margin-right: 3px;" width=15 src="https://user-images.githubusercontent.com/5758427/197977153-8c9c01a7-451a-4993-8e10-5a6ed5343d02.png">Community</a> |
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— |
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<a href="https://twitter.com/zama_fhe"> <img style="vertical-align: middle; display:inline-block; margin-right: 3px;" width=15 src="https://user-images.githubusercontent.com/5758427/197975044-bab9d199-e120-433b-b3be-abd73b211a54.png">@zama_fhe</a> |
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</p> |
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|
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<p align="center"> |
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<img width="100%" height="30%" src="https://raw.githubusercontent.com/kcelia/Img/main/HEALTHCARE PREDICTION USING MACHINE LEARNING WITH FULLY HOMOMORPHIC ENCRYPTION.png"> |
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</p> |
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""" |
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) |
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|
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with gr.Tabs(elem_id="them"): |
|
with gr.TabItem("1. Symptoms Selection") as feature: |
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gr.Markdown("<span style='color:orange'>Client Side</span>") |
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gr.Markdown("## Step 1: Provide your symptoms") |
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gr.Markdown( |
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"You can provide your health condition either by checking " |
|
"the symptoms available in the boxes or by selecting a known disease with " |
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"its predefined set of symptoms." |
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) |
|
|
|
|
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check_boxes = [] |
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for i, category in enumerate(SYMPTOMS_LIST): |
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with gr.Accordion( |
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pretty_print(category.keys()), open=True, elem_classes="feedback" |
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): |
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check_box = gr.CheckboxGroup( |
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pretty_print(category.values()), |
|
label=pretty_print(category.keys()), |
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info=f"Symptoms related to `{pretty_print(category.values())}`", |
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) |
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check_boxes.append(check_box) |
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|
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error_box1 = gr.Textbox(label="Error", visible=False) |
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|
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|
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disease_box = gr.Dropdown(list(sorted(set(df_test["prognosis"]))), label="Disease:") |
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|
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disease_box.change( |
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fn=fill_in_fn, |
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inputs=[disease_box, *check_boxes], |
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outputs=[*check_boxes], |
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) |
|
|
|
|
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with gr.Row(): |
|
user_vect_box1 = gr.Textbox(label="User Symptoms Vector:", interactive=False) |
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|
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with gr.Row(): |
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|
|
submit_button = gr.Button("Submit") |
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|
|
with gr.Row(): |
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|
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clear_button = gr.Button("Reset") |
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|
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submit_button.click( |
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fn=get_features, |
|
inputs=[*check_boxes], |
|
outputs=[user_vect_box1, error_box1], |
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) |
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with gr.TabItem("2. Data Encryption") as encryption_tab: |
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gr.Markdown("<span style='color:orange'>Client Side</span>") |
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gr.Markdown("## Step 2: Generate the keys") |
|
|
|
gen_key_btn = gr.Button("Generate the keys") |
|
error_box2 = gr.Textbox(label="Error", visible=False) |
|
|
|
with gr.Row(): |
|
|
|
with gr.Column(scale=1, min_width=600): |
|
user_id_box = gr.Textbox(label="User ID:", interactive=False) |
|
|
|
with gr.Column(scale=1, min_width=600): |
|
key_len_box = gr.Textbox(label="Evaluation Key Size:", interactive=False) |
|
|
|
with gr.Row(): |
|
|
|
with gr.Column(scale=2, min_width=600): |
|
key_box = gr.Textbox( |
|
label="Evaluation key (truncated):", |
|
max_lines=2, |
|
interactive=False, |
|
) |
|
|
|
gen_key_btn.click( |
|
key_gen_fn, |
|
inputs=user_vect_box1, |
|
outputs=[ |
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key_box, |
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user_id_box, |
|
key_len_box, |
|
error_box2, |
|
], |
|
) |
|
|
|
gr.Markdown("## Step 3: Encrypt the symptoms") |
|
|
|
encrypt_btn = gr.Button("Encrypt the symptoms with the private key") |
|
error_box3 = gr.Textbox(label="Error", visible=False) |
|
|
|
with gr.Row(): |
|
with gr.Column(scale=1, min_width=600): |
|
user_vect_box2 = gr.Textbox( |
|
label="User Symptoms Vector:", interactive=False |
|
) |
|
|
|
with gr.Column(scale=1, min_width=600): |
|
quant_vect_box = gr.Textbox(label="Quantized Vector:", interactive=False) |
|
|
|
with gr.Column(scale=1, min_width=600): |
|
enc_vect_box = gr.Textbox( |
|
label="Encrypted Vector:", max_lines=3, interactive=False |
|
) |
|
|
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encrypt_btn.click( |
|
encrypt_fn, |
|
inputs=[user_vect_box1, user_id_box], |
|
outputs=[ |
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user_vect_box2, |
|
quant_vect_box, |
|
enc_vect_box, |
|
error_box3, |
|
], |
|
) |
|
|
|
gr.Markdown( |
|
"## Step 4: Send the encrypted data to the " |
|
"<span style='color:orange'>Server Side</span>" |
|
) |
|
|
|
error_box4 = gr.Textbox(label="Error", visible=False) |
|
|
|
with gr.Row().style(equal_height=False): |
|
with gr.Column(scale=4): |
|
send_input_btn = gr.Button("Send the encrypted data") |
|
with gr.Column(scale=1): |
|
srv_resp_send_data_box = gr.Checkbox( |
|
label="Data Sent", show_label=False, interactive=False |
|
) |
|
|
|
send_input_btn.click( |
|
send_input_fn, |
|
inputs=[user_id_box, user_vect_box1], |
|
outputs=[error_box4, srv_resp_send_data_box], |
|
) |
|
|
|
with gr.TabItem("3. Processing Data") as fhe_tab: |
|
gr.Markdown("<span style='color:orange'>Client Side</span>") |
|
gr.Markdown("## Step 5: Run the FHE evaluation") |
|
|
|
run_fhe_btn = gr.Button("Run the FHE evaluation") |
|
error_box5 = gr.Textbox(label="Error", visible=False) |
|
fhe_execution_time_box = gr.Textbox( |
|
label="Total FHE Execution Time:", interactive=False |
|
) |
|
|
|
run_fhe_btn.click( |
|
run_fhe_fn, |
|
inputs=[user_id_box], |
|
outputs=[fhe_execution_time_box, error_box5], |
|
) |
|
|
|
gr.Markdown( |
|
"## Step 6: Get the data from the <span style='color:orange'>Server</span>" |
|
) |
|
|
|
error_box6 = gr.Textbox(label="Error", visible=False) |
|
|
|
with gr.Row().style(equal_height=True): |
|
with gr.Column(scale=4): |
|
get_output_btn = gr.Button("Get data") |
|
with gr.Column(scale=1): |
|
srv_resp_retrieve_data_box = gr.Checkbox( |
|
label="Data Received", show_label=False, interactive=False |
|
) |
|
|
|
get_output_btn.click( |
|
get_output_fn, |
|
inputs=[user_id_box, user_vect_box1], |
|
outputs=[srv_resp_retrieve_data_box, error_box6], |
|
) |
|
|
|
with gr.TabItem("4. Data Decryption") as decryption_tab: |
|
gr.Markdown("<span style='color:orange'>Client Side</span>") |
|
gr.Markdown("## Step 7: Decrypt the output") |
|
|
|
decrypt_target_btn = gr.Button("Decrypt the output") |
|
error_box7 = gr.Textbox(label="Error", visible=False) |
|
decrypt_target_box = gr.Textbox(abel="Decrypted Output:", interactive=False) |
|
|
|
decrypt_target_btn.click( |
|
decrypt_fn, |
|
inputs=[user_id_box, user_vect_box1], |
|
outputs=[decrypt_target_box, error_box7], |
|
) |
|
|
|
clear_button.click( |
|
clear_all_btn, |
|
outputs=[ |
|
user_vect_box1, |
|
user_vect_box2, |
|
disease_box, |
|
error_box1, |
|
error_box2, |
|
error_box3, |
|
error_box4, |
|
error_box5, |
|
error_box6, |
|
error_box7, |
|
user_id_box, |
|
key_len_box, |
|
key_box, |
|
quant_vect_box, |
|
enc_vect_box, |
|
srv_resp_send_data_box, |
|
srv_resp_retrieve_data_box, |
|
fhe_execution_time_box, |
|
decrypt_target_box, |
|
*check_boxes, |
|
], |
|
) |
|
|
|
demo.launch() |
|
|