                             Package ‘adeptdata’
                                         October 12, 2022
Type Package
Title Accelerometry Data Sets
Version 1.1
Description Created to host raw accelerometry data sets and their deriva-
      tives which are used in the corresponding 'adept' package.
License GPL-3
Encoding UTF-8
LazyData true
LazyDataCompression xz
RoxygenNote 7.1.1
Depends R (>= 2.10)
Suggests spelling
Language en-US
NeedsCompilation no
Author Marta Karas [aut, cre] (<https://orcid.org/0000-0001-5889-3970>),
      Jacek Urbanek [aut] (<https://orcid.org/0000-0002-1890-8899>),
      Jaroslaw Harezlak [aut] (<https://orcid.org/0000-0002-3070-7686>),
      William Fadel [aut] (<https://orcid.org/0000-0002-0292-6734>)
Maintainer Marta Karas <marta.karass@gmail.com>
Repository CRAN
Date/Publication 2021-03-28 00:10:06 UTC
R topics documented:
          acc_running . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 2
          acc_walking_IU . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .  3
          stride_template . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4
Index                                                                                                   6
                                                    1
2                                                                                              acc_running
  acc_running                   Outdoor Run Raw Accelerometry Data
Description
    Raw accelerometry data collected during 25 minutes of an outdoor run. Data were collected at
    frequency 100 Hz simultaneously with two wearable accelerometers located at left hip and left
    ankle.
Usage
    acc_running
Format
    A data.frame with 300000 observations of 5 variables:
        • loc_id - sensor location, one of: "left_hip", "left_ankle",
        • date_time - date and time of acceleration measurement collection stored as POSIXct,
        • x - acceleration measurement time-series collected from a "x" axis of the sensor accelerometer,
        • y - acceleration measurement time-series collected from a "y" axis of the sensor accelerometer,
        • z - acceleration measurement time-series collected from a "z" axis of the sensor accelerometer.
Details
    Data were collected during 25 minutes of an outdoor run performed by an adult healthy female, 180
    cm tall and of 67 kg weight
    The data were collected at frequency 100 Hz with two ActiGraph GT9X Link sensors. One of the
    sensors was attached to the shoe with a clip on the outside side of a left foot, just below the left
    ankle. The other sensor was attached to the elastic belt located at hip, on the left side of a hip.
    Based on a mobile tracking application output, the ground elevation difference between start and
    end point of the data collection is approximately 36 m (17 m at the start point, 53 m at the finish
    point). The distance covered is approximately 3.35 km.
    The person from which the data were collected is Marta Karas, a co-author of the package. The IRB
    Office Determination Request Form for Primary (New) Data Collection request form was submitted
    in regard to the collection and further publishing of these data. Based on preliminary review of the
    request form submitted, it was determined that the data collection and further data publishing ac-
    tivity described in the determination request does not qualify as human subjects research as defined
    by DHHS regulations 45 CFR 46.102, and does not require IRB oversight.
acc_walking_IU                                                                                           3
  acc_walking_IU               Outdoor Continuous Walking Raw Accelerometry Data
Description
    Raw accelerometry data collected during outdoor continuous walking from 32 healthy participants
    between 23 and 52 years of age. Data were collected at frequency 100 Hz simultaneously with four
    wearable accelerometers located at left wrist, left hip and both ankles.
Usage
    acc_walking_IU
Format
    A data.frame with 2590448 observations of 6 variables:
        • subj_id - study participant ID,
        • loc_id - sensor location, one of: "left_wrist", "left_hip", "left_ankle", "right_ankle",
        • time_s - duration of recorded exercise for a study participant, expressed in seconds,
        • x - acceleration measurement time-series collected from a "x" axis of the sensor accelerometer,
        • y - acceleration measurement time-series collected from a "y" axis of the sensor accelerometer,
        • z - acceleration measurement time-series collected from a "z" axis of the sensor accelerometer.
Details
    Raw accelerometry data of continuous walking were collected as a part of the study on Identification
    of Walking, Stair Climbing, and Driving Using Wearable Accelerometers, sponsored by the Indiana
    University CTSI grant and conducted at the Department of Biostatistics, Fairbanks School of Public
    Health at Indiana University. The study was led by Dr. Jaroslaw Harezlak, assisted by Drs. William
    Fadel and Jacek Urbanek. The study was approved by the IRB of Indiana University; all participants
    provided written informed consent. Attached data set is anonymized.
    Study enrolled 32 healthy participants between 23 and 52 years of age. Participants were asked,
    among others, to perform self-paced, undisturbed, outdoor walking on the sidewalk. Accelerometry
    data were collected simultaneously at four body locations: left wrist, left hip, left ankle, and right
    ankle, at frequency 100 Hz. Duration time of outdoor walking exercise ranges between 2,5 to 4
    minutes for study participants.
4                                                                                         stride_template
  stride_template                  Walking Stride Pattern Templates
Description
    Walking stride pattern templates derived from raw accelerometry data collected at four body loca-
    tions: left wrist, left hip, left ankle, and right ankle.
Usage
    stride_template
Format
    A list with four named elements:
        • left_wrist,
        • left_hip,
        • left_ankle,
        • right_ankle.
    Each of the above is a five-element list of matrix objects. The matrices are collection of (sub)population-
    specific stride pattern templates. For example,
        • stride_template$left_wrist[[1]] is a 1 x 200 matrix of one population-specific stride
           template derived from accelerometry data collected at left wrist.
        • stride_template$left_wrist[[2]] is a 2 x 200 matrix of two distinct subpopulation-
           specific stride templates derived from accelerometry data collected at left wrist. Each row
           is a one subpopulation-specific stride template.
        • stride_template$right_ankle[[5]] is a 5 x 200 matrix of five distinct subpopulation-
           specific stride templates derived from accelerometry data collected at right ankle.
Details
    Raw accelerometry data used to derive walking stride pattern templates were collected as a part of
    the study on Identification of Walking, Stair Climbing, and Driving Using Wearable Accelerome-
    ters, sponsored by the Indiana University CTSI grant and conducted at the Department of Biostatis-
    tics, Fairbanks School of Public Health at Indiana University. The study was led by Dr. Jaroslaw
    Harezlak, assisted by Drs. William Fadel and Jacek Urbanek. Study enrolled 32 healthy partici-
    pants between 23 and 52 years of age. Participants were asked, among others, to perform self-paced,
    undisturbed, outdoor walking on the sidewalk. Accelerometry data were collected at four body lo-
    cations: left wrist, left hip, left ankle, and right ankle.
    To derive empirical stride pattern, firstly, from each body location, 642 data segments corresponding
    to individual walking strides were manually segmented. Secondly, Vector Magnitude (VM), which
    is a univariate summary of three-dimensional time-series of raw accelerometry data, was computed.
    Lastly, 642 univariate vectors of VM were interpolated to have the same vector length, scaled,
stride_template                                                                                        5
     and clustered into 1,2,3,4 and 5 clusters via correlation clustering. The vectors obtained as point-
     wise means within each cluster were defined to be subpopulation-specific stride pattern templates,
     respectively.
Index
∗ datasets
     acc_running, 2
     acc_walking_IU, 3
     stride_template, 4
acc_running, 2
acc_walking_IU, 3
stride_template, 4
                        6
