<jupyter_start><jupyter_text>Multivariate fine-mapping workflows   Mixture Prior<jupyter_code>nohup sos run /home/hs3163/GIT/xqtl-pipeline/pipeline/multivariate/MASH/mixture_prior.ipynb ed_bovy \
--cwd ./ \
--container /mnt/mfs/statgen/containers/twas_latest.sif \
--name "PCC_DLPFC_AC" \
--data /mnt/mfs/statgen/xqtl_workflow_testing/module/MASH/PCC_DLPFC_AC.rds \
--mixture_components_dir /mnt/mfs/statgen/xqtl_workflow_testing/module/MASH/  -s force &<jupyter_output><empty_output><jupyter_text>MvSuSIE with summary statistics<jupyter_code>nohup sos run /home/hs3163/GIT/xqtl-pipeline/pipeline/fine_mapping/SuSiE/SuSiE_RSS.ipynb MvSuSiE_summary_stats_analysis  \
        --merged_analysis_unit /mnt/mfs/statgen/xqtl_workflow_testing/module/Merge/merge/RDS/PCC_DLPFC_AC.analysis_unit  \
        --resid_cor /mnt/mfs/statgen/xqtl_workflow_testing/module/MASH/PCC_DLPFC_AC.EZ.V_simple.rds \
        --prior /mnt/mfs/statgen/xqtl_workflow_testing/module/mixture_prior/PCC_DLPFC_AC.ed_bovy.V_simple.rds \
        --LD_Recipe /home/hs3163/GIT/ADSPFG-xQTL/MWE/LD_Recipe \
        --container /mnt/mfs/statgen/containers/twas_latest.sif \
        --wd ./ \
        --Theme_prefix "PCC_DLPFC_AC" &  #\<jupyter_output><empty_output>
{'fraction_non_alphanumeric': 0.12408163265306123, 'fraction_numerical': 0.009795918367346938, 'mean_word_length': 3.983739837398374, 'pattern_counts': {'":': 0, '<': 9, '<?xml version=': 0, '>': 9, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'chain_length': '2', 'dir': 'jupyter-structured-clean-dedup', 'id': '213402', 'license': 'MIT', 'n_tokens_mistral': 554, 'n_tokens_neox': 536, 'n_words': 42, 'path': 'pipeline/multivariate_fine_mapping.ipynb', 'repo_name': 'seriousbamboo/xqtl-pipeline', 'size': '1225'}