<jupyter_start><jupyter_text>Water<jupyter_code>%load_ext autoreload
%autoreload 2
import mmlite
from mmlite.systems import Water
from mmlite.plot import show_mdtraj
import mmlite.simulation
import logging

logging.basicConfig(level=logging.INFO)
water = Water()
water.get_view(all='ball+stick')
simulation = mmlite.simulation.Simulation(water)
simulation.minimize()
simulation.sys.get_view(all='ball+stick')
# Integrate some dynamics
simulation.step(1000)
show_mdtraj('traj.pdb', all='ball+stick')<jupyter_output><empty_output>
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