<jupyter_start><jupyter_text>Prepare papermill for schulung3.geomar.de    Make sure you have activated the correct kernel    Install kernel manually<jupyter_code>!python -m ipykernel install --user --name parcels-container_2021.09.29-09ab0ce
!jupyter kernelspec list<jupyter_output>Available kernels:
  parcels-container_2021.03.17-6c459b7    /home/jupyter-workshop007/.local/share/jupyter/kernels/parcels-container_2021.03.17-6c459b7
  parcels-container_2021.09.29-09ab0ce    /home/jupyter-workshop007/.local/share/jupyter/kernels/parcels-container_2021.09.29-09ab0ce
  py3_lagrange_v2.2.2                     /home/jupyter-workshop007/.local/share/jupyter/kernels/py3_lagrange_v2.2.2
  python3                                 /opt/tljh/user/envs/parcels-container_2021.09.29-09ab0ce/share/jupyter/kernels/python3<jupyter_text>Run papermill on schulung3.geomar.de<jupyter_code>%%bash

for year in {1990..2019};
do
papermill 309_afox_trackendsandpaths_sumsandmeans_nonorth_21_0_final.ipynb \
        ../executed/309_afox_fullstats/309_afox_trackendsandpaths_sumsandmeans_nonorth_21_0_final_${year}.ipynb \
        -p year $year \
        -p nsubsets 32 \
        -k parcels-container_2021.09.29-09ab0ce
done<jupyter_output>Input Notebook:  309_afox_trackendsandpaths_sumsandmeans_nonorth_21_0_final.ipynb
Output Notebook: ../executed/309_afox_fullstats/309_afox_trackendsandpaths_sumsandmeans_nonorth_21_0_final_1990.ipynb
Generating grammar tables from /opt/tljh/user/envs/parcels-container_2021.09.29-09ab0ce/lib/python3.9/site-packages/blib2to3/Grammar.txt
Writing grammar tables to /home/jupyter-workshop007/.cache/black/21.9b0/Grammar3.9.7.final.0.pickle
Writing failed: [Errno 2] No such file or directory: '/home/jupyter-workshop007/.cache/black/21.9b0/tmpjx3pwmf0'
Generating grammar tables from /opt/tljh/user/envs/parcels-container_2021.09.29-09ab0ce/lib/python3.9/site-packages/blib2to3/PatternGrammar.txt
Writing grammar tables to /home/jupyter-workshop007/.cache/black/21.9b0/PatternGrammar3.9.7.final.0.pickle
Writing failed: [Errno 2] No such file or directory: '/home/jupyter-workshop007/.cache/black/21.9b0/tmpv9swm0fg'
Executing:   0%|          | 0/64 [00:00<?, ?cell/s]Executing notebook with kernel: par[...]
{'fraction_non_alphanumeric': 0.10727109515260323, 'fraction_numerical': 0.10143626570915619, 'mean_word_length': 4.384057971014493, 'pattern_counts': {'":': 0, '<': 8, '<?xml version=': 0, '>': 7, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 1, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'chain_length': '2', 'dir': 'jupyter-structured-clean-dedup', 'id': '2534', 'license': 'MIT', 'n_tokens_mistral': 1015, 'n_tokens_neox': 877, 'n_words': 107, 'path': 'notebooks/exploratory/309_afox_papermill.ipynb', 'repo_name': 'alanfox/spg_fresh_blob_202104', 'size': '2228'}