<commit_before>= mimiweb

Mimiweb is a ruby client for the MiMI and Metabolomics databases provided by NCIBI

http://portal.ncibi.org/gateway/

http://mimi.ncibi.org/MimiWeb/main-page.jsp

== Usage

  require 'mimiweb'

  # Free text search
  results = Mimiweb.search("pwp1")

  # GeneID search (Entrez)
 	results = Mimiweb.entrez(1436)
  
  # Or pass a type. Types are: compounds, interactions, reactions, nlp.
  # Default = :interactions

  results = Mimiweb.entrez(7389, :compounds)


  # KEGG CompundID search
  results = Mimiweb.kegg_compund("C00061")

  # KEGG ReactionID search

  results = Mimiweb.kegg_reaction("R00548")


== To Do

* Tests!

== Contributing to mimiweb
 
* Check out the latest master to make sure the feature hasn't been implemented or the bug hasn't been fixed yet
* Check out the issue tracker to make sure someone already hasn't requested it and/or contributed it
* Fork the project
* Start a feature/bugfix branch<commit_msg>rdoc formatting<commit_after>= mimiweb

Mimiweb is a ruby client for the MiMI and Metabolomics databases provided by NCIBI

http://portal.ncibi.org/gateway/

http://mimi.ncibi.org/MimiWeb/main-page.jsp

== Usage

  require 'mimiweb'

  # Free text search
  results = Mimiweb.search("pwp1")

  # GeneID search (Entrez)
  results = Mimiweb.entrez(1436)
  
  # Or pass a type. Types are: compounds, interactions, reactions, nlp.
  # Default = :interactions

  results = Mimiweb.entrez(7389, :compounds)


  # KEGG CompundID search
  results = Mimiweb.kegg_compund("C00061")

  # KEGG ReactionID search

  results = Mimiweb.kegg_reaction("R00548")


== To Do

* Tests!

== Contributing to mimiweb
 
* Check out the latest master to make sure the feature hasn't been implemented or the bug hasn't been fixed yet
* Check out the issue tracker to make sure someone already hasn't requested it and/or contributed it
* Fork the project
* Start a feature/bugfix branch
{'fraction_non_alphanumeric': 0.08672936259143156, 'fraction_numerical': 0.019853709508881923, 'mean_word_length': 3.961139896373057, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '1005459', 'n_tokens_mistral': 685, 'n_tokens_neox': 616, 'n_words': 210}