<commit_before>[bumpversion]
current_version = 0.1.0
commit = True
tag = True

[bumpversion:file:setup.py]
search = version='{current_version}'
replace = version='{new_version}'

[bumpversion:file:scvi/__init__.py]
search = __version__ = '{current_version}'
replace = __version__ = '{new_version}'

[bdist_wheel]
universal = 1

[flake8]
exclude = .git,docs,functions
max-line-length = 119

[aliases]
# Define setup.py command aliases here
test = pytest

[tool:pytest]
collect_ignore = ['setup.py']
<commit_msg>only report unit test coverage statistics for the scvi directory (#29)<commit_after>[bumpversion]
current_version = 0.1.0
commit = True
tag = True

[bumpversion:file:setup.py]
search = version='{current_version}'
replace = version='{new_version}'

[bumpversion:file:scvi/__init__.py]
search = __version__ = '{current_version}'
replace = __version__ = '{new_version}'

[bdist_wheel]
universal = 1

[flake8]
exclude = .git,docs,functions
max-line-length = 119

[aliases]
# Define setup.py command aliases here
test = pytest

[tool:pytest]
collect_ignore = ['setup.py']

[coverage:run]
source=scvi
{'fraction_non_alphanumeric': 0.13496376811594202, 'fraction_numerical': 0.016304347826086956, 'mean_word_length': 6.317880794701987, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '3331126', 'n_tokens_mistral': 404, 'n_tokens_neox': 388, 'n_words': 88}