<commit_before>class Tophat < Formula
  desc "Spliced read mapper for RNA-Seq"
  homepage "https://ccb.jhu.edu/software/tophat"
  url "https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz"
  sha256 "37840b96f3219630082b15642c47f5ef95d14f6ee99c06a369b08b3d05684da5"
  revision 6
  # doi "10.1093/bioinformatics/btp120"
  # tag "bioinformatics"

  bottle do
    cellar :any
    sha256 "b804e6bf82f232895b6c8ba21a3c107a1a8b6616732e52589e959132dd276f33" => :sierra
    sha256 "b964747668f7ab6b87bde406ed879b43ea657411a9d7d110bf927d5ee7bba896" => :el_capitan
    sha256 "a6a9c831594ec15ee2335b7146a7f86eba18f4a7224ec4af882fd276532be8c2" => :x86_64_linux
  end<commit_msg>tophat: revision for boost<commit_after>class Tophat < Formula
  desc "Spliced read mapper for RNA-Seq"
  homepage "https://ccb.jhu.edu/software/tophat"
  url "https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz"
  sha256 "37840b96f3219630082b15642c47f5ef95d14f6ee99c06a369b08b3d05684da5"
  revision 7
  # doi "10.1093/bioinformatics/btp120"
  # tag "bioinformatics"

  bottle :disable, "needs to be rebuilt with latest boost"
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{'dir': 'git-commits-cleaned', 'id': '7672661', 'n_tokens_mistral': 656, 'n_tokens_neox': 500, 'n_words': 67}