<commit_before>channels:
    - defaults
    - bioconda
    - conda-forge
dependencies:
  - pip
  - adapterremoval>=2.2.0
  - samtools>=1.3.0
  - picard>=1.137
  - bowtie2>=2.3.0,<2.4.0
  - bwa>=0.7.15
  - mapdamage2>=2.2.1
  - r-base
  - r-rcpp
  - r-rcppgsl
  - r-gam
  - r-inline
  - pip:
    - paleomix==1.3.2<commit_msg>update conda environment. This fixes #38<commit_after>channels:
  - defaults
  - bioconda
  - conda-forge
dependencies:
  - pip
  - adapterremoval==2.3.1
  - samtools==1.6
  - picard==2.24.2
  - bowtie2==2.3.0
  - bwa==0.7.17
  - mapdamage2==2.2.1
  - pysam==0.16.0
  - r-base
  - r-rcpp
  - r-rcppgsl
  - r-gam
  - r-inline
  - pip:
    - paleomix==1.3.2
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{'dir': 'git-commits-cleaned', 'id': '3276108', 'n_tokens_mistral': 350, 'n_tokens_neox': 335, 'n_words': 43}