<commit_before><?xml version="1.0"?>
<root>
    <metadata>
        <gencode>1</gencode>
        <genomes>
              <genome path="/home/abretaud/iuc_tools_abretaud/tools/jbrowse/test-data/merlin.fa">
                  <metadata />
              </genome>s
        </genomes>
        <general>
            <defaultLocation></defaultLocation>
            <trackPadding>20</trackPadding>

            <shareLink>true</shareLink>
            <aboutDescription></aboutDescription>
            <show_tracklist>true</show_tracklist>
            <show_nav>true</show_nav>
            <show_overview>true</show_overview>
            <show_menu>true</show_menu>
            <hideGenomeOptions>false</hideGenomeOptions>
        </general>
        <galaxyUrl>http://localhost:8080</galaxyUrl>
    </metadata>
    <tracks>
    </tracks>
    <plugins
        ComboTrackSelector=""
        Bookmarks=""
        GCContent=""
        BlastView="True"
        theme=""
        />
</root><commit_msg>repair test<commit_after><?xml version="1.0"?>
<root>
    <metadata>
        <gencode>1</gencode>
        <genomes>
              <genome path="/home/abretaud/iuc_tools_abretaud/tools/jbrowse/test-data/merlin.fa">
                  <metadata />
              </genome>s
        </genomes>
        <general>
            <defaultLocation></defaultLocation>
            <trackPadding>20</trackPadding>

            <shareLink>true</shareLink>
            <aboutDescription></aboutDescription>
            <show_tracklist>true</show_tracklist>
            <show_nav>true</show_nav>
            <show_overview>true</show_overview>
            <show_menu>true</show_menu>
            <hideGenomeOptions>false</hideGenomeOptions>
        </general>
        <galaxyUrl>http://localhost:8080</galaxyUrl>
    </metadata>
    <tracks>
    </tracks>
    <plugins
        ComboTrackSelector=""
        Bookmarks=""
        GCContent=""
        BlastView=""
        theme=""
        />
</root>
{'fraction_non_alphanumeric': 0.1354378818737271, 'fraction_numerical': 0.009164969450101833, 'mean_word_length': 1.9154302670623145, 'pattern_counts': {'":': 0, '<': 77, '<?xml version=': 2, '>': 77, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 2}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '524952', 'n_tokens_mistral': 602, 'n_tokens_neox': 577, 'n_words': 66}