<commit_before>#CFLAGS=--ansi --pedantic -O2
CFLAGS=--ansi --pedantic -g 
INCLUDE= -I../src/
#LDFLAGS= -L../src/ -lsim 
LDFLAGS=  ../src/*.o

all: test_network ex1_mass_action ex2_percolation ex3_chain_binomial test_rng

path_length_test: path_length_test.cpp 
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) path_length_test.cpp -o path_length_test  

test_network: test_network.cpp 
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) test_network.cpp -o test_network  

ex1_mass_action: ex1_mass_action.cpp
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) ex1_mass_action.cpp -o ex1_mass_action

ex2_percolation: ex2_percolation.cpp
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) ex2_percolation.cpp -o ex2_percolation

ex3_chain_binomial: ex3_chain_binomial.cpp
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) ex3_chain_binomial.cpp -o ex3_chain_binomial

ex4_dynamic_net: ex4_dynamic_net.cpp
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) ex4_dynamic_net.cpp -o ex4_dynamic_net

ex5adiff_eq: ex5_diff_eq.cpp
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) -lgsl -lblas ex5_diff_eq.cpp -o ex5adiff_eq

ex5b_diff_eq: ex5_diff_eq.cpp
	g++ $(CFLAGS) -o ex5b_diff_eq ex5_diff_eq.cpp $(INCLUDE) $(LDFLAGS) -L../gsl_subset -lgsl_subset -I../gsl_subset 



test_rng: test_rng.cpp
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) test_rng.cpp -o test_rng


clean:
	rm -f test_network ex1_mass_action ex2_percolation ex3_chain_binomial
<commit_msg>Cleaned up examples Makefile<commit_after>CFLAGS=--ansi --pedantic -O2
#CFLAGS=--ansi --pedantic -g 
INCLUDE= -I../src/
LDFLAGS=  ../src/*.o

all: epifire test_network ex1_mass_action ex2_percolation ex3_chain_binomial test_rng

epifire: 
	$(MAKE) -C ../src/

path_length_test: path_length_test.cpp 
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) path_length_test.cpp -o path_length_test  

test_network: test_network.cpp 
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) test_network.cpp -o test_network  

ex1_mass_action: ex1_mass_action.cpp
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) ex1_mass_action.cpp -o ex1_mass_action

ex2_percolation: ex2_percolation.cpp
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) ex2_percolation.cpp -o ex2_percolation

ex3_chain_binomial: ex3_chain_binomial.cpp
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) ex3_chain_binomial.cpp -o ex3_chain_binomial

ex4_dynamic_net: ex4_dynamic_net.cpp
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) ex4_dynamic_net.cpp -o ex4_dynamic_net

ex5adiff_eq: ex5_diff_eq.cpp
	g++ $(CFLAGS) $(INCLUDE) $(LDFLAGS) -lgsl -lblas ex5_diff_eq.cpp -o ex5adiff_eq

ex5b_diff_eq: ex5_diff_eq.cpp
	g++ $(CFLAGS) -o ex5b_diff_eq ex5_diff_eq.cpp $(INCLUDE) $(LDFLAGS) -L../gsl_subset -lgsl_subset -I../gsl_subset 

clean:
	rm -f test_network ex1_mass_action ex2_percolation ex3_chain_binomial
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