<commit_before>#!/usr/bin/env bash

CONDA_URL="https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh"
bash Miniconda3-latest-Linux-x86_64.sh

GPU_FLAG=""

while getopts ":g:" opt; do
  case $opt in
    g)
    ;;
    \?)
      echo "Invalid option: -$OPTARG" >&2
      exit 1
      ;;
    :)
      echo "-gpu was triggered."
      GPU_FLAG='-gpu'
      ;;
  esac
done

### Prerequisites

#sudo apt-get install blast2
#sudo apt-get install ncbi-blast+

#wget http://raptorx.uchicago.edu/download/eHVlZmVuZy5jdWlAa2F1c3QuZWR1LnNh/25/ #nr90.tar.gz


conda create -p virtualenv python=3.6

conda install -p virtualenv pip -c anaconda<commit_msg>optimizer still not safe to load.<commit_after>#!/usr/bin/env bash

CONDA_URL="https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh"
chmod 777 Miniconda3-latest-Linux-x86_64.sh
./Miniconda3-latest-Linux-x86_64.sh

GPU_FLAG=""

while getopts ":g:" opt; do
  case $opt in
    g)
    ;;
    \?)
      echo "Invalid option: -$OPTARG" >&2
      exit 1
      ;;
    :)
      echo "-gpu was triggered."
      GPU_FLAG='-gpu'
      ;;
  esac
done

### Prerequisites

#sudo apt-get install blast2
#sudo apt-get install ncbi-blast+

#wget http://raptorx.uchicago.edu/download/eHVlZmVuZy5jdWlAa2F1c3QuZWR1LnNh/25/ #nr90.tar.gz


conda create -p virtualenv python=3.6

conda install -p virtualenv pip -c anaconda
{'fraction_non_alphanumeric': 0.1347414420975965, 'fraction_numerical': 0.04078659868900218, 'mean_word_length': 3.0530973451327434, 'pattern_counts': {'":': 2, '<': 3, '<?xml version=': 0, '>': 5, 'https://': 2, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 2, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '1383985', 'n_tokens_mistral': 609, 'n_tokens_neox': 561, 'n_words': 112}