<commit_before>package:
  name: smeg
  version: "1.1.1"

build:
  skip: True  # [osx]
  number: 0
  
source:
  url: https://github.com/ohlab/SMEG/archive/1.1.tar.gz
  sha256: 30463e51bd0438a4d24910b4ac4f55133f9c7bfd728cb75390e609e9eaf2977b

requirements:
  run:
    - parallel
    - mauve
    - roary
    - prokka
    - bowtie2
    - samtools>=1.5
    - bamtools
    - bedtools
    - blast
    - r-seqinr
    - r-dplyr
    - r-ggplot2
    - r-gplots
    - r-getopt
    - r-gsubfn
    - r-ape
    - r-dynamictreecut
    - r-data.table
    - readline>=6.2

test:
  commands:
    - smeg -h

about:
  home: https://github.com/ohlab/SMEG
  license: MIT
  summary: Strain-level MEtagenomic Growth estimation (SMEG) measures growth rates of microbial strains from complex metagenomic dataset<commit_msg>new version of smeg 1.1 (#15143)<commit_after>package:
  name: smeg
  version: "1.1.2"

build:
  skip: True  # [osx]
  number: 0
  
source:
  url: https://github.com/ohlab/SMEG/archive/1.1.tar.gz
  sha256: 30463e51bd0438a4d24910b4ac4f55133f9c7bfd728cb75390e609e9eaf2977b

requirements:
  run:
    - parallel
    - mauve
    - roary
    - prokka
    - bowtie2
    - samtools=1.8
    - bamtools
    - bedtools
    - blast
    - r-seqinr
    - r-dplyr
    - r-ggplot2
    - r-gplots
    - r-getopt
    - r-gsubfn
    - r-ape
    - r-dynamictreecut
    - r-data.table
    - readline>=6.2
    - openssl=1.0

test:
  commands:
    - smeg -h

about:
  home: https://github.com/ohlab/SMEG
  license: MIT
  summary: Strain-level MEtagenomic Growth estimation (SMEG) measures growth rates of microbial strains from complex metagenomic dataset
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