<commit_before>{% set version = "1.2.2" %}
{% set name = "amptk" %}

package:
  name: {{ name }}
  version: {{ version }}

source:
  fn: {{ name }}-{{ version }}.tar.gz
  url: https://github.com/nextgenusfs/{{ name }}/archive/{{ version }}.tar.gz
  sha256: e48c90c3c1026bd0dba71329be6ce8729817aee0c6c542ad9acec6eb079d5966

build:
  number: 0

requirements:
  run:
    - python
    - biopython
    - psutil
    - python-edlib >=1.2.1
    - vsearch >=2.2.0
    - natsort
    - pandas
    - numpy
    - matplotlib
    - seaborn
    - biom-format
    - r-base
    - bioconductor-dada2 >=1.4
    - bioconductor-phyloseq
    - pigz
 
test:
  commands:
    - amptk version

about:
  home: https://github.com/nextgenusfs/amptk
  license: BSD 2-Clause License
  license_file: LICENSE.md
  summary: 'AMPtk: Amplicon tool kit for processing high throughput amplicon sequencing data.'
  license_family: BSD

extra:
    identifiers:
        - doi:10.1101/213470<commit_msg>AMPtk update to v1.2.3 (#9071)<commit_after>{% set version = "1.2.4" %}
{% set name = "amptk" %}

package:
  name: {{ name }}
  version: {{ version }}

source:
  fn: {{ name }}-{{ version }}.tar.gz
  url: https://github.com/nextgenusfs/{{ name }}/archive/{{ version }}.tar.gz
  sha256: b99478a7392d4923a2ecfe175d4f6ac93e84f3b3193ab214d399d7c073b7c615

build:
  number: 0

requirements:
  run:
    - python
    - biopython
    - psutil
    - python-edlib >=1.2.1
    - vsearch >=2.2.0
    - natsort
    - pandas
    - numpy
    - matplotlib
    - seaborn
    - biom-format
    - r-base
    - bioconductor-dada2 >=1.4
    - bioconductor-phyloseq
    - pigz
 
test:
  commands:
    - amptk version

about:
  home: https://github.com/nextgenusfs/amptk
  license: BSD 2-Clause License
  license_file: LICENSE.md
  summary: 'AMPtk: Amplicon tool kit for processing high throughput amplicon sequencing data.'
  license_family: BSD

extra:
    identifiers:
        - doi:10.7717/peerj.4925
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