<commit_before>{
	"bool": {
		"must": [
			{
				"multi_match": {
					"query": "{{disease}}",
					"fields": [
						"title.synonym^2",
						"abstract.synonym",
						"keyword",
						"meshTags.synonym"
					],
					"tie_breaker": 0.3,
					"type": "best_fields",
					"boost": 1
				}
			},
			{
				"multi_match": {
					"query": "{{gene}}",
					"fields": [
						"title.synonym^2",
						"abstract.synonym",
						"keyword",
						"meshTags.synonym"
					],
					"tie_breaker": 0.3,
					"type": "best_fields"
				}
			}
		],
		"should": [
			{
				"match": {
					"_type": "extra"
				}
			},
			{
				"bool": {
					"should": {
						"multi_match": {
							"query": "cancer carcinoma tumor",
							"fields": [
								"title.synonym^2",
								"abstract.synonym",
								"keyword",
								"meshTags.synonym"
							],
							"tie_breaker": 0.3,
							"type": "best_fields"
						}
					}
				}
			},
			{
				"bool": {
					"should": {
						"multi_match": {
							"query": "gene genotype DNA base",
							"fields": [
								"title.synonym^2",
								"abstract.synonym",
								"keyword",
								"meshTags.synonym"
							],
							"tie_breaker": 0.3,
							"type": "best_fields"
						}
					}
				}
			},
			{
				"bool": {
					"should": {
						"multi_match": {
							"query": "surgery therapy treatment prognosis prognostic survival patient resistance recurrence targets malignancy study therapeutical outcome",
							"fields": [
								"title.synonym^2",
								"abstract.synonym"
							],
							"tie_breaker": 0.3,
							"type": "best_fields"
						}
					}
				}<commit_msg>Include negative boosts also in the synonym template<commit_after>{
	"bool": {
		"must": [
			{
				"multi_match": {
					"query": "{{disease}}",
					"fields": [
						"title.synonym^2",
						"abstract.synonym",
						"keyword",
						"meshTags.synonym"
					],
					"tie_breaker": 0.3,
					"type": "best_fields",
					"boost": 1
				}
			},
			{
				"multi_match": {
					"query": "{{gene}}",
					"fields": [
						"title.synonym^2",
						"abstract.synonym",
						"keyword",
						"meshTags.synonym"
					],
					"tie_breaker": 0.3,
					"type": "best_fields"
				}
			}
		],
		"should": [
			{
				"match": {
					"_type": "extra"
				}
			},
			{
				"bool": {
					"should": {
						"multi_match": {
							"query": "cancer carcinoma tumor",
							"fields": [
								"title.synonym^2",
								"abstract.synonym",
								"keyword",
								"meshTags.synonym"
							],
							"tie_breaker": 0.3,
							"type": "best_fields"
						}
					}
				}
			},
			{
				"bool": {
					"should": {
						"multi_match": {
							"query": "gene genotype DNA base",
							"fields": [
								"title.synonym^2",
								"abstract.synonym",
								"keyword",
								"meshTags.synonym"
							],
							"tie_breaker": 0.3,
							"type": "best_fields"
						}
					}
				}
			},
			{
				"bool": {
					"should": {
						"multi_match": {
							"query": "surgery therapy treatment prognosis prognostic survival patient resistance recurrence targets malignancy study therapeutical outcome",
							"fields": [
								"title.synonym^2",
								"abstract.synonym"
							],
							"tie_breaker": 0.3,
							"type": "best_fields"
						}
					}
				}
			},
			{
				"bool": {
					"should": {
						"multi_match": {
							"query": "transcript paraffin tumorigenesis embedded formalin fish tissue probes detection screening",
							"fields": [
								"title^2",
								"abstract"
							],
							"tie_breaker": 0.3,
							"type": "best_fields",
							"boost": -1
						}
					}
				}
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{'dir': 'git-commits-cleaned', 'id': '4999930', 'n_tokens_mistral': 2104, 'n_tokens_neox': 1219, 'n_words': 212}