<commit_before>	    
	    
from TissueSpecimenImpl xxTargetAliasxx left join fetch xxTargetAliasxx.specimenCharacteristics
			xxTargetAliasxx left join fetch xxTargetAliasxx.specimenCollectionGroup
			xxTargetAliasxx left join fetch xxTargetAliasxx.specimenCollectionGroup.clinicalReport
			From edu.wustl.catissuecore.domainobject.impl.TissueSpecimenImpl as xxTargetAliasxx
			---
			
<ns37:TissueSpecimen id="133" type="Fixed Tissue Block" available="true" positionDimensionOne="1" positionDimensionTwo="8" comments="" 
	activityStatus="Active" quantityInGram="2.0" availableQuantityInGram="2.0" xmlns:ns37="gme://caCORE.cabig/3.0/edu.wustl.catissuecore.domainobject">
	
	<ns37:specimenCharacteristics tissueSite="BREAST" tissueSide="Left" pathologicalStatus="Malignant"/>
	<ns37:specimenCollectionGroup id="21" clinicalDiagnosis="Adenocarcinoma, NOS" clinicalStatus="Pre-Therapy" activityStatus="Active">
		<ns37:clinicalReport id="1" surgicalPathologyNumber="45454"/>
	</ns37:specimenCollectionGroup>
</ns37:TissueSpecimen>


select xxTargetAliasxx.id,xxTargetAliasxx.type,xxTargetAliasxx.externalIdentifierCollection.name 
From edu.wustl.catissuecore.domainobject.impl.TissueSpecimenImpl as xxTargetAliasxx 
	left join xxTargetAliasxx.externalIdentifierCollection 
	where xxTargetAliasxx.externalIdentifierCollection.id in 
	(select id From edu.wustl.catissuecore.domainobject.impl.ExternalIdentifierImpl)
			
			
<soapenc:Array xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/">
	<item xsi:type="xsd:long" xmlns="" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">1</item>
	<item xsi:type="ns2:QueryExpressionDialect" xmlns="" xmlns:ns2="http://www.globus.org/foobar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">Frozen Tissue Block</item>
</soapenc:Array>

<soapenc:Array xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/">
	<item xsi:type="xsd:long" >133</item>
	<item xsi:type="ns72:QueryExpressionDialect" >Fixed Tissue Block</item>
	<item xsi:type="ns73:QueryExpressionDialect" >Left</item>
</soapenc:Array>
<commit_msg>*** empty log message ***<commit_after>	    
	    
from TissueSpecimenImpl xxTargetAliasxx left join fetch xxTargetAliasxx.specimenCharacteristics
			xxTargetAliasxx left join fetch xxTargetAliasxx.specimenCollectionGroup
			xxTargetAliasxx left join fetch xxTargetAliasxx.specimenCollectionGroup.clinicalReport
			From edu.wustl.catissuecore.domainobject.impl.TissueSpecimenImpl as xxTargetAliasxx
			---
			
<ns37:TissueSpecimen id="133" type="Fixed Tissue Block" available="true" positionDimensionOne="1" positionDimensionTwo="8" comments="" 
	activityStatus="Active" quantityInGram="2.0" availableQuantityInGram="2.0" xmlns:ns37="gme://caCORE.cabig/3.0/edu.wustl.catissuecore.domainobject">
	
	<ns37:specimenCharacteristics tissueSite="BREAST" tissueSide="Left" pathologicalStatus="Malignant"/>
	<ns37:specimenCollectionGroup id="21" clinicalDiagnosis="Adenocarcinoma, NOS" clinicalStatus="Pre-Therapy" activityStatus="Active">
		<ns37:clinicalReport id="1" surgicalPathologyNumber="45454"/>
	</ns37:specimenCollectionGroup>
</ns37:TissueSpecimen>
<ns38:TissueSpecimen>......
<ns39:TissueSpecimen>......
<ns40:TissueSpecimen>......

select xxTargetAliasxx.id,xxTargetAliasxx.type,xxTargetAliasxx.externalIdentifierCollection.name 
From edu.wustl.catissuecore.domainobject.impl.TissueSpecimenImpl as xxTargetAliasxx 
	left join xxTargetAliasxx.externalIdentifierCollection 
	where xxTargetAliasxx.externalIdentifierCollection.id in 
	(select id From edu.wustl.catissuecore.domainobject.impl.ExternalIdentifierImpl)
			
			
<soapenc:Array xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/">
	<item xsi:type="xsd:long" xmlns="" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">1</item>
	<item xsi:type="ns2:QueryExpressionDialect" xmlns="" xmlns:ns2="http://www.globus.org/foobar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">Frozen Tissue Block</item>
</soapenc:Array>

<soapenc:Array xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/">
	<item xsi:type="xsd:long" >133</item>
	<item xsi:type="ns72:QueryExpressionDialect" >Fixed Tissue Block</item>
	<item xsi:type="ns73:QueryExpressionDialect" >Left</item>
</soapenc:Array>

{'fraction_non_alphanumeric': 0.1302491103202847, 'fraction_numerical': 0.0265717674970344, 'mean_word_length': 7.381709741550696, 'pattern_counts': {'":': 0, '<': 46, '<?xml version=': 0, '>': 46, 'https://': 0, 'lorem ipsum': 0, 'www.': 6, 'xml': 20}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '4118317', 'n_tokens_mistral': 1531, 'n_tokens_neox': 1345, 'n_words': 195}