<commit_before>from distutils.core import setup
import uuid
from pip.req import parse_requirements
import os
install_reqs = parse_requirements(os.path.join(os.path.dirname(__file__), "requirements.txt"), session=uuid.uuid1())
reqs = [str(ir.req) for ir in install_reqs if ir.req is not None]
setup(
    name='pyCGA',
    packages=['pyCGA', 'pyCGA.Utils'],
    version='0.2.4',
    scripts=[os.path.join(os.path.dirname(__file__),'pyCGA/Scripts/pyCGA'), os.path.join(os.path.dirname(__file__),'pyCGA/Scripts/pyCGAIdConverter'),
             os.path.join(os.path.dirname(__file__),'pyCGA/Scripts/pyCGAVariantFetcher'), os.path.join(os.path.dirname(__file__),'pyCGA/Scripts/pyCGALogin')],
    url='',
    license='',
    author='antonio',
    author_email='<EMAIL>',
    description='',
    install_requires=reqs,
)<commit_msg>requirements need to be in the setup.py file rather than in the requirements.txt so the created tarball can work independently<commit_after>from distutils.core import setup

import os

setup(
    name='pyCGA',
    packages=['pyCGA', 'pyCGA.Utils'],
    version='0.2.4',
    scripts=[os.path.join(os.path.dirname(__file__),'pyCGA/Scripts/pyCGA'), os.path.join(os.path.dirname(__file__),'pyCGA/Scripts/pyCGAIdConverter'),
             os.path.join(os.path.dirname(__file__),'pyCGA/Scripts/pyCGAVariantFetcher'), os.path.join(os.path.dirname(__file__),'pyCGA/Scripts/pyCGALogin')],
    url='',
    license='',
    author='antonio',
    author_email='<EMAIL>',
    description='',
    install_requires=[
        'pip >= 7.1.2',
        'requests >= 2.7',
        'avro == 1.7.7',
        'pathlib >= 1.0.1',
        'requests_toolbelt >= 0.7.0',

    ],
)
{'fraction_non_alphanumeric': 0.16955223880597015, 'fraction_numerical': 0.01253731343283582, 'mean_word_length': 4.078787878787879, 'pattern_counts': {'":': 0, '<': 5, '<?xml version=': 0, '>': 9, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '512150', 'n_tokens_mistral': 614, 'n_tokens_neox': 609, 'n_words': 92}