<commit_before><?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0                       http://maven.apache.org/xsd/maven-4.0.0.xsd">
    <modelVersion>4.0.0</modelVersion>

    <groupId>pl.edu.icm.coansys</groupId>
    <artifactId>coansys</artifactId>
    <name>Content Analysis Systems</name>
    <version>1.0-SNAPSHOT</version>
    <packaging>pom</packaging>

    <properties>
        <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
        <hadoop.version>2.0.0-mr1-cdh4.0.1</hadoop.version>
        <hadoop.common.version>2.0.0-cdh4.0.1</hadoop.common.version>
        <hadoop.client.version>2.0.0-cdh4.0.1</hadoop.client.version>
        <pig.version>0.9.2-cdh4.0.1</pig.version>
        <hbase.version>0.92.1-cdh4.0.1</hbase.version>
        <slf4j.version>1.6.4</slf4j.version>
        <protobuf.java.version>2.4.1</protobuf.java.version>
        <testng.version>6.5.2</testng.version>
        <maven.surefire.plugin.version>2.12.3</maven.surefire.plugin.version>
        <synat.version>1.7-SNAPSHOT</synat.version>
    </properties>

    <build>
        <plugins>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-surefire-plugin</artifactId>
                <version>${maven.surefire.plugin.version}</version>
                <executions>
                    <execution>
                        <id>default-test</id>
                        <configuration>
                            <excludedGroups>medium,slow</excludedGroups>
                        </configuration>
                    </execution>
                    <execution>
                        <id>medium</id>
                        <phase>integration-test</phase>
                        <goals>
                            <goal>test</goal>
                        </goals>
                        <configuration>
                            <groups>medium</groups>
                            <reportsDirectory>target/medium-surefire-reports/</reportsDirectory>
                        </configuration>
                    </execution>
                </executions>
            </plugin>
        </plugins>
    </build>

    <profiles>
        <profile>
            <id>slowTests</id>
            <build>
                <plugins>
                     <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-compiler-plugin</artifactId>
                        <version>2.3.2</version>
                        <configuration>
                            <source>1.6</source>
                            <target>1.6</target>
                        </configuration>
                    </plugin>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-surefire-plugin</artifactId>
                        <version>${maven.surefire.plugin.version}</version>
                        <executions>
                            <execution>
                                <id>slow</id>
                                <phase>integration-test</phase>
                                <goals>
                                    <goal>test</goal>
                                </goals>
                                <configuration>
                                    <groups>slow</groups>
                                    <reportsDirectory>target/slow-surefire-reports/</reportsDirectory>
                                </configuration>
                            </execution>
                        </executions>
                    </plugin>
                </plugins>
            </build>
        </profile>
        <profile>
            <id>nrml</id>
            <activation>
                <activeByDefault>true</activeByDefault>
            </activation>
            <build>
                <plugins>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-compiler-plugin</artifactId>
                        <version>2.3.2</version>
                        <configuration>
                            <source>1.6</source>
                            <target>1.6</target>
                        </configuration>
                    </plugin>
                </plugins>
            </build>
        </profile>
        <profile>
            <id>sep</id>
            <build>
                <plugins>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-compiler-plugin</artifactId>
                        <version>2.3.2</version>
                        <configuration>
                            <source>1.6</source>
                            <target>1.6</target>
                        </configuration>
                    </plugin>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-assembly-plugin</artifactId>
                        <configuration>
                            <descriptors>
                                <descriptor>${project.artifactId}/src/main/resources/assemblies/only-deps.xml</descriptor>
                            </descriptors>
                        </configuration>
                        <executions>
                            <execution>
                                <phase>package</phase>
                                <id>create-my-bundle</id>
                                <goals>
                                    <goal>single</goal>
                                </goals>
                            </execution>
                        </executions>
                    </plugin>
                </plugins>
            </build>
        </profile>
        <profile>
            <id>full</id>
            <build>
                <plugins>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-compiler-plugin</artifactId>
                        <version>2.3.2</version>
                        <configuration>
                            <source>1.6</source>
                            <target>1.6</target>
                        </configuration>
                    </plugin>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-assembly-plugin</artifactId>
                        <configuration>
                            <descriptorRefs>
                                <descriptorRef>jar-with-dependencies</descriptorRef>
                            </descriptorRefs>
                        </configuration>
                        <executions>
                            <execution>
                                <phase>package</phase>
                                <id>create-my-bundle</id>
                                <goals>
                                    <goal>single</goal>
                                </goals>
                            </execution>
                        </executions>
                    </plugin>
                </plugins>
            </build>
        </profile>
    </profiles>

    <modules>
        <module>citations</module>
        <module>commons</module>
        <module>commons-scala</module>
        <module>disambiguation</module>
        <module>disambiguation-author</module>
        <module>document-classification</module>
        <module>document-similarity</module>
        <module>importers</module>
        <module>integration</module>
        <module>logs-analysis</module>
  </modules>

    <dependencies>
        <dependency>
            <groupId>org.testng</groupId>
            <artifactId>testng</artifactId>
            <version>${testng.version}</version>
            <scope>test</scope>
            <type>jar</type>
        </dependency>
        <dependency>
            <groupId>pl.edu.icm.synat</groupId>
            <artifactId>synat-core-services-api</artifactId>
            <version>${synat.version}</version>
            <type>jar</type>
        </dependency>
        <dependency>
            <groupId>pl.edu.icm.synat</groupId>
            <artifactId>synat-platform-connector</artifactId>
            <version>${synat.version}</version>
        </dependency>
        <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-client</artifactId>
            <version>${hadoop.client.version}</version>
        </dependency>
        <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-client</artifactId>
            <version>${hadoop.client.version}</version>
            <classifier>javadoc</classifier>
        </dependency>
        <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-core</artifactId>
            <version>${hadoop.version}</version>
        </dependency> 
            <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-core</artifactId>
            <version>${hadoop.version}</version>
            <classifier>sources</classifier>
        </dependency>
        <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-common</artifactId>
            <version>${hadoop.common.version}</version>
        </dependency>
               <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-common</artifactId>
            <version>${hadoop.common.version}</version>
            <classifier>sources</classifier>
        </dependency>
        <dependency>
            <groupId>org.apache.hbase</groupId>
            <artifactId>hbase</artifactId>
            <version>${hbase.version}</version>
        </dependency>
        <dependency>
            <groupId>org.apache.hbase</groupId>
            <artifactId>hbase</artifactId>
            <version>${hbase.version}</version>
            <classifier>sources</classifier>
        </dependency>
        <dependency>
            <groupId>org.apache.pig</groupId>
            <artifactId>pig</artifactId>
            <version>${pig.version}</version>
        </dependency>
          <dependency>
            <groupId>org.apache.pig</groupId>
            <artifactId>pig</artifactId>
            <version>${pig.version}</version>
            <classifier>sources</classifier>
        </dependency>
        <dependency>
            <groupId>org.apache.pig</groupId>
            <artifactId>pigunit</artifactId>
            <version>${pig.version}</version>
        </dependency>
        <dependency>
            <groupId>org.slf4j</groupId>
            <artifactId>slf4j-api</artifactId>
            <version>${slf4j.version}</version>
        </dependency>        
        <dependency>
            <groupId>org.slf4j</groupId>
            <artifactId>slf4j-simple</artifactId>
            <version>${slf4j.version}</version>
        </dependency>  
        <dependency>
            <groupId>com.google.protobuf</groupId>
            <artifactId>protobuf-java</artifactId>
            <version>${protobuf.java.version}</version>
        </dependency>
    </dependencies>
    <repositories>
        <repository>
            <id>yadda</id>
            <name>YADDA project repository</name>
            <url>http://maven.icm.edu.pl/artifactory/repo</url>
        </repository>
        <repository>
            <id>cloudera</id>
            <name>Cloudera hadoop repository</name>
            <url>https://repository.cloudera.com/artifactory/cloudera-repos/</url>
        </repository>
        <repository>
            <id>sonatype</id>
            <name>Sonatype</name>
            <url>https://oss.sonatype.org/content/repositories/releases/</url>
        </repository>
        <repository>
            <id>nicta-scoobi</id>
            <name>Scoobi repository</name>
            <url>http://nicta.github.com/scoobi/releases/</url>
        </repository>
    </repositories>
</project>
<commit_msg>pom.xml merge<commit_after><?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0                       http://maven.apache.org/xsd/maven-4.0.0.xsd">
    <modelVersion>4.0.0</modelVersion>

    <groupId>pl.edu.icm.coansys</groupId>
    <artifactId>coansys</artifactId>
    <name>Content Analysis Systems</name>
    <version>1.0-SNAPSHOT</version>
    <packaging>pom</packaging>

    <properties>
        <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
        <hadoop.version>2.0.0-mr1-cdh4.0.1</hadoop.version>
        <hadoop.common.version>2.0.0-cdh4.0.1</hadoop.common.version>
        <hadoop.client.version>2.0.0-cdh4.0.1</hadoop.client.version>
        <pig.version>0.9.2-cdh4.0.1</pig.version>
        <hbase.version>0.92.1-cdh4.0.1</hbase.version>
        <slf4j.version>1.6.4</slf4j.version>
        <protobuf.java.version>2.4.1</protobuf.java.version>
        <testng.version>6.5.2</testng.version>
        <maven.surefire.plugin.version>2.12.3</maven.surefire.plugin.version>
        <synat.version>1.7-SNAPSHOT</synat.version>
    </properties>

    <build>
        <plugins>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-surefire-plugin</artifactId>
                <version>${maven.surefire.plugin.version}</version>
                <executions>
                    <execution>
                        <id>default-test</id>
                        <configuration>
                            <excludedGroups>medium,slow</excludedGroups>
                        </configuration>
                    </execution>
                    <execution>
                        <id>medium</id>
                        <phase>integration-test</phase>
                        <goals>
                            <goal>test</goal>
                        </goals>
                        <configuration>
                            <groups>medium</groups>
                            <reportsDirectory>target/medium-surefire-reports/</reportsDirectory>
                        </configuration>
                    </execution>
                </executions>
            </plugin>
        </plugins>
    </build>

    <profiles>
        <profile>
            <id>slowTests</id>
            <build>
                <plugins>
                     <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-compiler-plugin</artifactId>
                        <version>2.3.2</version>
                        <configuration>
                            <source>1.6</source>
                            <target>1.6</target>
                        </configuration>
                    </plugin>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-surefire-plugin</artifactId>
                        <version>${maven.surefire.plugin.version}</version>
                        <executions>
                            <execution>
                                <id>slow</id>
                                <phase>integration-test</phase>
                                <goals>
                                    <goal>test</goal>
                                </goals>
                                <configuration>
                                    <groups>slow</groups>
                                    <reportsDirectory>target/slow-surefire-reports/</reportsDirectory>
                                </configuration>
                            </execution>
                        </executions>
                    </plugin>
                </plugins>
            </build>
        </profile>
        <profile>
            <id>nrml</id>
            <activation>
                <activeByDefault>true</activeByDefault>
            </activation>
            <build>
                <plugins>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-compiler-plugin</artifactId>
                        <version>2.3.2</version>
                        <configuration>
                            <source>1.6</source>
                            <target>1.6</target>
                        </configuration>
                    </plugin>
                </plugins>
            </build>
        </profile>
        <profile>
			<!-- used in project CoAnSys/document-classification -->
			<!-- requires the file $PROJECT/src/main/resources/assemblies/only-deps.xml -->
            <id>sep</id>
            <build>
                <plugins>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-compiler-plugin</artifactId>
                        <version>2.3.2</version>
                        <configuration>
                            <source>1.6</source>
                            <target>1.6</target>
                        </configuration>
                    </plugin>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-assembly-plugin</artifactId>
                        <configuration>
                            <descriptors>
                                <descriptor>src/main/resources/assemblies/only-deps.xml</descriptor>
                            </descriptors>
                        </configuration>
                        <executions>
                            <execution>
                                <phase>package</phase>
                                <id>create-my-bundle</id>
                                <goals>
                                    <goal>single</goal>
                                </goals>
                            </execution>
                        </executions>
                    </plugin>
                </plugins>
            </build>
        </profile>
        <profile>
            <id>full</id>
            <build>
                <plugins>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-compiler-plugin</artifactId>
                        <version>2.3.2</version>
                        <configuration>
                            <source>1.6</source>
                            <target>1.6</target>
                        </configuration>
                    </plugin>
                    <plugin>
                        <groupId>org.apache.maven.plugins</groupId>
                        <artifactId>maven-assembly-plugin</artifactId>
                        <configuration>
                            <descriptorRefs>
                                <descriptorRef>jar-with-dependencies</descriptorRef>
                            </descriptorRefs>
                        </configuration>
                        <executions>
                            <execution>
                                <phase>package</phase>
                                <id>create-my-bundle</id>
                                <goals>
                                    <goal>single</goal>
                                </goals>
                            </execution>
                        </executions>
                    </plugin>
                </plugins>
            </build>
        </profile>
    </profiles>

    <modules>
        <module>citations</module>
        <module>commons</module>
        <module>commons-scala</module>
        <module>disambiguation</module>
        <module>disambiguation-author</module>
        <module>document-classification</module>
        <module>document-similarity</module>
        <module>importers</module>
        <module>integration</module>
        <module>logs-analysis</module>
  </modules>

    <dependencies>
        <dependency>
            <groupId>org.testng</groupId>
            <artifactId>testng</artifactId>
            <version>${testng.version}</version>
            <scope>test</scope>
            <type>jar</type>
        </dependency>
        <dependency>
            <groupId>pl.edu.icm.synat</groupId>
            <artifactId>synat-core-services-api</artifactId>
            <version>${synat.version}</version>
            <type>jar</type>
        </dependency>
        <dependency>
            <groupId>pl.edu.icm.synat</groupId>
            <artifactId>synat-platform-connector</artifactId>
            <version>${synat.version}</version>
        </dependency>
        <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-client</artifactId>
            <version>${hadoop.client.version}</version>
        </dependency>
        <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-client</artifactId>
            <version>${hadoop.client.version}</version>
            <classifier>javadoc</classifier>
        </dependency>
        <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-core</artifactId>
            <version>${hadoop.version}</version>
        </dependency> 
            <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-core</artifactId>
            <version>${hadoop.version}</version>
            <classifier>sources</classifier>
        </dependency>
        <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-common</artifactId>
            <version>${hadoop.common.version}</version>
        </dependency>
               <dependency>
            <groupId>org.apache.hadoop</groupId>
            <artifactId>hadoop-common</artifactId>
            <version>${hadoop.common.version}</version>
            <classifier>sources</classifier>
        </dependency>
        <dependency>
            <groupId>org.apache.hbase</groupId>
            <artifactId>hbase</artifactId>
            <version>${hbase.version}</version>
        </dependency>
        <dependency>
            <groupId>org.apache.hbase</groupId>
            <artifactId>hbase</artifactId>
            <version>${hbase.version}</version>
            <classifier>sources</classifier>
        </dependency>
        <dependency>
            <groupId>org.apache.pig</groupId>
            <artifactId>pig</artifactId>
            <version>${pig.version}</version>
        </dependency>
          <dependency>
            <groupId>org.apache.pig</groupId>
            <artifactId>pig</artifactId>
            <version>${pig.version}</version>
            <classifier>sources</classifier>
        </dependency>
        <dependency>
            <groupId>org.apache.pig</groupId>
            <artifactId>pigunit</artifactId>
            <version>${pig.version}</version>
        </dependency>
        <dependency>
            <groupId>org.slf4j</groupId>
            <artifactId>slf4j-api</artifactId>
            <version>${slf4j.version}</version>
        </dependency>        
        <dependency>
            <groupId>org.slf4j</groupId>
            <artifactId>slf4j-simple</artifactId>
            <version>${slf4j.version}</version>
        </dependency>  
        <dependency>
            <groupId>com.google.protobuf</groupId>
            <artifactId>protobuf-java</artifactId>
            <version>${protobuf.java.version}</version>
        </dependency>
    </dependencies>
    <repositories>
        <repository>
            <id>yadda</id>
            <name>YADDA project repository</name>
            <url>http://maven.icm.edu.pl/artifactory/repo</url>
        </repository>
        <repository>
            <id>cloudera</id>
            <name>Cloudera hadoop repository</name>
            <url>https://repository.cloudera.com/artifactory/cloudera-repos/</url>
        </repository>
        <repository>
            <id>sonatype</id>
            <name>Sonatype</name>
            <url>https://oss.sonatype.org/content/repositories/releases/</url>
        </repository>
        <repository>
            <id>nicta-scoobi</id>
            <name>Scoobi repository</name>
            <url>http://nicta.github.com/scoobi/releases/</url>
        </repository>
    </repositories>
</project>

{'fraction_non_alphanumeric': 0.12446057672917928, 'fraction_numerical': 0.008550110909457552, 'mean_word_length': 1.2091945830363506, 'pattern_counts': {'":': 0, '<': 915, '<?xml version=': 2, '>': 915, 'https://': 4, 'lorem ipsum': 0, 'www.': 2, 'xml': 10}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 10, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '5942957', 'n_tokens_mistral': 6844, 'n_tokens_neox': 6072, 'n_words': 639}