<commit_before>#include "voom.h"
#include <string>
#include <iostream>
#include <iomanip>
#include <time.h>
#include <vector>
#include <fstream>
#include <unistd.h>
#include <iomanip>
#include <limits>
#include "Node.h"
#include "Model.h"
#include "Lbfgsb.h"

#include <vtkPolyData.h>
#include <vtkPolyDataReader.h>
#include <vtkSmartPointer.h>

#include "SpringPotential.h"
#include "PotentialBody.h"
#include "BrownianKick.h"
#include "ViscousRegularizer.h"
#include "HelperFunctions.h"

#if defined(_OPENMP)
#include <omp.h>
#endif

using namespace tvmet;
using namespace std;
using namespace voom;

typedef DeformationNode<3> Node; // nickname for mechanics nodes
typedef std::vector< Node* > NodeContainer;
typedef blitz::Array<double, 1> Vector_t;
typedef blitz::Array<int, 1> IntArray;

int main(int argc, char* argv[]) {
	clock_t t1, t2;
	t1 = clock();
	if (argc != 4) {
		cout << "usage: " << argv[0] << " <filename> <dataOutputFile> <vtkFileStartNum>\n";
		return -1;
	}<commit_msg>Minor fix<commit_after>#include "voom.h"
#include <string>
#include <iostream>
#include <iomanip>
#include <time.h>
#include <vector>
#include <fstream>
#include <unistd.h>
#include <iomanip>
#include <limits>
#include "Node.h"
#include "Model.h"
#include "Lbfgsb.h"

#include <vtkPolyData.h>
#include <vtkPolyDataReader.h>
#include <vtkSmartPointer.h>

#include "SpringPotential.h"
#include "PotentialBody.h"
#include "BrownianKick.h"
#include "ViscousRegularizer.h"
#include "HelperFunctions.h"

#if defined(_OPENMP)
#include <omp.h>
#endif

using namespace tvmet;
using namespace std;
using namespace voom;

typedef DeformationNode<3> Node; // nickname for mechanics nodes
typedef std::vector< Node* > NodeContainer;
typedef blitz::Array<double, 1> Vector_t;
typedef blitz::Array<int, 1> IntArray;

int main(int argc, char* argv[]) {
	clock_t t1, t2;
	t1 = clock();
	if (argc != 5) {
		cout << "usage: " << argv[0] << " <filename>"
			<<"<dataInputFile> <dataOutputFile> <vtkFileStartNum>\n";
		return -1;
	}
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{'dir': 'git-commits-cleaned', 'id': '915228', 'n_tokens_mistral': 798, 'n_tokens_neox': 758, 'n_words': 194}