<commit_before>#
# Object for storing the connection to the analysis database
#
# Written by <NAME> <<EMAIL>>
# Based on Michele Clamp's Bio::EnsEMBL::Pipeline::DBSQL::Obj
#
# Copyright GRL/EBI
#
# You may distribute this module under the same terms as perl itself
#
# POD documentation - main docs before the code


=pod

=head1 NAME

Bio::EnsEMBL::Pipeline::DBSQL::DBAdaptor -
adapter class for EnsEMBL Pipeline DB

=head1 SYNOPSIS

    my $dbobj = new Bio::EnsEMBL::Pipeline::DBSQL::DBAdaptor;
    $dbobj->do_funky_db_stuff;

=head1 DESCRIPTION

Interface for the connection to the analysis database

=head1 CONTACT

Describe contact details here

=head1 APPENDIX

The rest of the documentation details each of the object methods.
Internal methods are usually preceded with a _

=cut


# Let the code begin...

package Bio::EnsEMBL::Pipeline::DBSQL::DBAdaptor;


use vars qw(@ISA);
use strict;
use DBI;

use Bio::EnsEMBL::DBSQL::DBAdaptor;
use Bio::EnsEMBL::Pipeline::DB::ObjI;
use Bio::EnsEMBL::Pipeline::DBSQL::RuleAdaptor;
use Bio::EnsEMBL::Pipeline::DBSQL::AnalysisAdaptor;
use Bio::EnsEMBL::Pipeline::DBSQL::JobAdaptor;
use Bio::EnsEMBL::Pipeline::DBSQL::StateInfoContainer;

use Bio::Root::RootI;

# Inherits from the base bioperl object

@ISA = qw(Bio::EnsEMBL::DBSQL::DBAdaptor Bio::EnsEMBL::DBSQL::Obj);


# sub new {
    # my ($class,@args) = @_;
    # my $self = $class->SUPER::new(@args);
    # return $self;
# }

# new() inherited from Bio::EnsEMBL::DBSQL::BaseAdaptor


=head2 get_JobAdaptor

 Title   : get_JobAdaptor
 Usage   : $db->get_JobAdaptor
 Function: The Adaptor for Job objects in this db
 Example :
 Returns : Bio::EnsEMBL::Pipeline::DBSQL::JobAdaptor
 Args    : nothing


=cut
<commit_msg>removed Bio::EnsEMBL::DBSQL::Obj from @ISA<commit_after>#
# Object for storing the connection to the analysis database
#
# Written by <NAME> <<EMAIL>>
# Based on Michele Clamp's Bio::EnsEMBL::Pipeline::DBSQL::Obj
#
# Copyright GRL/EBI
#
# You may distribute this module under the same terms as perl itself
#
# POD documentation - main docs before the code


=pod

=head1 NAME

Bio::EnsEMBL::Pipeline::DBSQL::DBAdaptor -
adapter class for EnsEMBL Pipeline DB

=head1 SYNOPSIS

    my $dbobj = new Bio::EnsEMBL::Pipeline::DBSQL::DBAdaptor;
    $dbobj->do_funky_db_stuff;

=head1 DESCRIPTION

Interface for the connection to the analysis database

=head1 CONTACT

Describe contact details here

=head1 APPENDIX

The rest of the documentation details each of the object methods.
Internal methods are usually preceded with a _

=cut


# Let the code begin...

package Bio::EnsEMBL::Pipeline::DBSQL::DBAdaptor;


use vars qw(@ISA);
use strict;
use DBI;

use Bio::EnsEMBL::DBSQL::DBAdaptor;
use Bio::EnsEMBL::Pipeline::DB::ObjI;
use Bio::EnsEMBL::Pipeline::DBSQL::RuleAdaptor;
use Bio::EnsEMBL::Pipeline::DBSQL::AnalysisAdaptor;
use Bio::EnsEMBL::Pipeline::DBSQL::JobAdaptor;
use Bio::EnsEMBL::Pipeline::DBSQL::StateInfoContainer;

use Bio::Root::RootI;

# Inherits from the base bioperl object

@ISA = qw(Bio::EnsEMBL::DBSQL::DBAdaptor);


# sub new {
    # my ($class,@args) = @_;
    # my $self = $class->SUPER::new(@args);
    # return $self;
# }

# new() inherited from Bio::EnsEMBL::DBSQL::BaseAdaptor


=head2 get_JobAdaptor

 Title   : get_JobAdaptor
 Usage   : $db->get_JobAdaptor
 Function: The Adaptor for Job objects in this db
 Example :
 Returns : Bio::EnsEMBL::Pipeline::DBSQL::JobAdaptor
 Args    : nothing


=cut

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