<commit_before>#!/usr/bin/env python
# Description = Annotates selected queries with proteins and domain information
# author= "<NAME> <<EMAIL>>"

import argparse
import os

__description__ = ("Annotates selected queries with proteins and "
                   "domain information")

class SelectedProteinTable(object):
    
    def __init__(self, filtered_data_path,
                 uniprot_reference_table,
                 xml_feature_table,
                 selected_data_table):
        self._filtered_data_path = filtered_data_path
        self._uniprot_reference_table = uniprot_reference_table
        self._xml_feature_table = xml_feature_table
        self._selected_data_table = selected_data_table
        self._filter_data_header = ''
        self._reference_data_header = ''
        self._feature_data_header = ''<commit_msg>Update annotate_selected_data.py<commit_after>#!/usr/bin/env python
# Description = Annotates selected queries with proteins and domain information

import argparse
import os

__description__ = ("Annotates selected queries with proteins and "
                   "domain information")

class SelectedProteinTable(object):
    
    def __init__(self, filtered_data_path,
                 uniprot_reference_table,
                 xml_feature_table,
                 selected_data_table):
        self._filtered_data_path = filtered_data_path
        self._uniprot_reference_table = uniprot_reference_table
        self._xml_feature_table = xml_feature_table
        self._selected_data_table = selected_data_table
        self._filter_data_header = ''
        self._reference_data_header = ''
        self._feature_data_header = ''
{'fraction_non_alphanumeric': 0.06294964028776978, 'fraction_numerical': 0.0, 'mean_word_length': 3.021686746987952, 'pattern_counts': {'":': 0, '<': 6, '<?xml version=': 0, '>': 6, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 6}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '3087400', 'n_tokens_mistral': 452, 'n_tokens_neox': 436, 'n_words': 90}