<commit_before>{
  "$schema": "http://json-schema.org/draft-04/schema",
  "description": "DESCRIBE EVIDENCE",
  "type": "object",
  "additionalProperties": false,
  "required": [
    "evidence"
  ],
  "properties": {
    "evidence": {
      "type": "object",
      "additionalProperties": false,
      "required": [
          "bel_statement",
          "citation"
      ],
      "properties": {
        "bel_statement": {
            "type": "string",
            "title": "BEL Statement",
            "description": "A BEL Statement is an expression that represents knowledge of the existence of biological entities and relationships between them that are known to be observed within a particular context, based on some source of prior knowledge such as a scientific publication or newly generated experimental data."
        },
        "citation": {
            "type": "object",
            "title": "Citation",
            "description": "The citation specifies the written source where the biological knowledge was referenced.",
            "properties": {
                "type": {
                    "type": "string",
                    "enum": [
                        "PubMed",
                        "Book",
                        "Journal",
                        "Online Resource",
                        "Other"
                    ],
                    "title": "Citation Type",
                    "description": "The citation type"
                },
                "id": {
                    "type": "string",
                    "title": "Citation ID",
                    "description": "Identifier of the citation, e.g. PubMed ID"
                },
                "name": {
                    "type": "string",
                    "title": "Citation Name",
                    "description": "Name or citation string for the reference."
                }
            }
        },
        "biological_context": {
            "type": "object",
            "title": "Biological Context",
            "description": "A biological context specifies the experiment's parameters where this interaction was observed.",
            "additionalProperties": true,
            "properties": {
                "ncbi_tax_id": {
                    "type": "integer",
                    "title": "NCBI Taxonomy ID",
                    "description": "NCBI taxonomy id - e.g. 9606 is the id for Homo sapien"
                },
                "species_common_name": {
                    "type": "string",
                    "title": "Species common name",
                    "description": "Common name for species like human, mouse or rat"
                }
            }
        },
        "summary_text": {
            "type": "string",
            "title": "Summary Text",
            "description": "Abstract from source text to provide support for this evidence"
        },
        "metadata": {
            "type": "object",
            "title": "Evidence resource metadata",
            "description": "Metadata that describes the evidence resource.",
            "additionalProperties": true
        }
      }
    }
  }
}
<commit_msg>updated citation in evidence schema<commit_after>{
  "$schema": "http://json-schema.org/draft-04/schema",
  "description": "DESCRIBE EVIDENCE",
  "type": "object",
  "additionalProperties": false,
  "required": [
    "evidence"
  ],
  "properties": {
    "evidence": {
      "type": "object",
      "additionalProperties": false,
      "required": [
          "bel_statement",
          "citation"
      ],
      "properties": {
        "bel_statement": {
            "type": "string",
            "title": "BEL Statement",
            "description": "A BEL Statement is an expression that represents knowledge of the existence of biological entities and relationships between them that are known to be observed within a particular context, based on some source of prior knowledge such as a scientific publication or newly generated experimental data."
        },
        "citation": {
            "type": "object",
            "title": "Citation",
            "description": "The citation specifies the written source where the biological knowledge was referenced.",
            "required": [
              "type",
              "id"
            ],
            "properties": {
                "type": {
                    "type": "string",
                    "enum": [
                        "PubMed",
                        "Book",
                        "Journal",
                        "Online Resource",
                        "Other"
                    ],
                    "title": "Citation Type",
                    "description": "The citation type of the reference."
                },
                "id": {
                    "type": "string",
                    "title": "Citation ID",
                    "description": "The citation identifier (PubMed ID, ISBN, DOI, URL) of the reference."
                },
                "name": {
                    "type": "string",
                    "title": "Citation Name",
                    "description": "The citation name of the reference."
                },
                "date": {
                    "type": "string",
                    "title": "Citation Date",
                    "description": "The citation date of the reference."
                },
                "authors": {
                    "type": "string",
                    "title": "Citation Authors",
                    "description": "The citation authors of the reference."
                },
                "comment": {
                    "type": "string",
                    "title": "Citation Comment",
                    "description": "The citation comment of the reference."
                }
            }
        },
        "biological_context": {
            "type": "object",
            "title": "Biological Context",
            "description": "A biological context specifies the experiment's parameters where this interaction was observed.",
            "additionalProperties": true,
            "properties": {
                "ncbi_tax_id": {
                    "type": "integer",
                    "title": "NCBI Taxonomy ID",
                    "description": "NCBI taxonomy id - e.g. 9606 is the id for Homo sapien"
                },
                "species_common_name": {
                    "type": "string",
                    "title": "Species common name",
                    "description": "Common name for species like human, mouse or rat"
                }
            }
        },
        "summary_text": {
            "type": "string",
            "title": "Summary Text",
            "description": "Abstract from source text to provide support for this evidence"
        },
        "metadata": {
            "type": "object",
            "title": "Evidence resource metadata",
            "description": "Metadata that describes the evidence resource.",
            "additionalProperties": true
        }
      }
    }
  }
}

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