<commit_before>from gotoh2.aligner import Aligner
g2 = Aligner()
print g2.align('ACGT', 'ACT')<commit_msg>I think this works now<commit_after>from gotoh2.aligner import Aligner
g2 = Aligner()
g2.gap_open_penalty = 10
print g2.align('ACGT', 'ACT')
{'fraction_non_alphanumeric': 0.13008130081300814, 'fraction_numerical': 0.036585365853658534, 'mean_word_length': 6.967741935483871, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '5849352', 'n_tokens_mistral': 101, 'n_tokens_neox': 92, 'n_words': 23}