<commit_before>#
# = bio/shell.rb - Loading all BioRuby shell features
#
# Copyright::   Copyright (C) 2005
#               <NAME> <<EMAIL>>
# License:      Ruby's
#
# $Id: shell.rb,v 1.14 2006/02/17 17:12:39 k Exp $
#

require 'bio'
require 'yaml'
require 'open-uri'
require 'pp'

module Bio::Shell

  require 'bio/shell/core'
  require 'bio/shell/interface'
  require 'bio/shell/plugin/entry'
  require 'bio/shell/plugin/seq'
  require 'bio/shell/plugin/midi'
  require 'bio/shell/plugin/codon'
  require 'bio/shell/plugin/flatfile'
  require 'bio/shell/plugin/obda'
  require 'bio/shell/plugin/keggapi'
  require 'bio/shell/plugin/emboss'

  extend Ghost
  extend Private

end


<commit_msg>* added object, web, demo modules<commit_after>#
# = bio/shell.rb - Loading all BioRuby shell features
#
# Copyright::   Copyright (C) 2005, 2006
#               <NAME> <<EMAIL>>
# License:      Ruby's
#
# $Id: shell.rb,v 1.15 2006/02/27 09:34:23 k Exp $
#

require 'bio'
require 'yaml'
require 'open-uri'
require 'pp'

module Bio::Shell

  require 'bio/shell/core'
  require 'bio/shell/interface'
  require 'bio/shell/object'
  require 'bio/shell/web'
  require 'bio/shell/demo'
  require 'bio/shell/plugin/entry'
  require 'bio/shell/plugin/seq'
  require 'bio/shell/plugin/midi'
  require 'bio/shell/plugin/codon'
  require 'bio/shell/plugin/flatfile'
  require 'bio/shell/plugin/obda'
  require 'bio/shell/plugin/keggapi'
  require 'bio/shell/plugin/emboss'

  extend Ghost
  extend Private

end



{'fraction_non_alphanumeric': 0.14037433155080214, 'fraction_numerical': 0.03074866310160428, 'mean_word_length': 3.4421364985163203, 'pattern_counts': {'":': 0, '<': 9, '<?xml version=': 0, '>': 9, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '7172923', 'n_tokens_mistral': 586, 'n_tokens_neox': 534, 'n_words': 126}