<commit_before>vizlab: "0.1"
info:
  id: testviz
  name: Example visualization project directory
  date: 2016-06-09
  publish-date: 2016-07-09
  path: /notsure
  description: >-
    Bare-bones example visualization project directory for testing vizlab
  keywords: vizlab, visualizations, data, R
  mimetypeDictionary: moreMimetypes.yaml
  twitter: "@USGS_R"
  owner:
    name: <NAME>
    email: <EMAIL>
    affiliation: U.S. Geological Survey
  contributors:
    -
      name: <NAME>
      email: <EMAIL>
      affiliation: U.S. Geological Survey
    -
      name: <NAME>
      email: <EMAIL>
      affiliation: U.S. Geological Survey
    -
      name: <NAME>
      email: <EMAIL>
      affiliation: U.S. Geological Survey
    -
      name: <NAME>
      email: <EMAIL>
      affiliation: U.S. Geological Survey
    -
      name: <NAME>
      email: <EMAIL>
      affiliation: U.S. Geological Survey
  thumbnail:
    url: images/thumbnail.png
    width: 250
    height: 250
    alt: Test for vizlab
fetch:
  -
    id: siteTextData
    location: data/siteText.yaml
    mimetype: text/yaml
  -
    id: Cuyahoga
    location: cache/fetch/CuyahogaTDS.csv
    fetcher: sciencebase
    refetch: false
    remoteItemId: 575d839ee4b04f417c2a03fe
    remoteFilename: CuyahogaTDS.csv
    mimetype: text/csv
  -
    id: MayflyNymph
    location: data/MayflyNymph.csv
    fetcher: mayflyNymph
    scripts: scripts/fetch/mayflyNymph.R
    reader: myCsvReader
    mimetype: text/csv
    export: true
  -
    id: carData
    location: data/car_info
    mimetype: text/csv
    reader: folder
process:
  -
    id: CuyahogaShort
    location: cache/process/CuyahogaShort.tsv
    mimetype: text/tab-separated-values
    scripts: scripts/process/cuyahoga.R
    depends:
      - Cuyahoga
    processor: cuyahoga
visualize:
  -
    id: relativeAbundanceFig
    location: figures/relativeAbundanceFig.svg
    depends: [CuyahogaShort, MayflyNymph]
    visualizer: relativeAbundance
    mimetype: image/svg+xml
    export: false
publish:
  -
    id: appJS
    location: layout/js/app.js
    mimetype: application/javascript
  -
    id: mainCSS
    location: layout/css/main.css
    mimetype: text/css
  -
    id: normalizeCSS
    location: layout/css/normalize.css
    mimetype: text/css
  -
    id: index
    name: index
    template: layout/templates/index.mustache
    context: siteTextData
    depends: [ appJS, mainCSS, normalizeCSS ]
    publisher: page
    context: 
      title: testViz
      sections: [ header, intro, relativeAbundance, footer ]
  -
    id: header
    template: layout/templates/header.mustache
    context: siteTextData
    publisher: section
  -<commit_msg>viz.yaml<commit_after>vizlab: "0.1"
info:
  id: testviz
  name: Example visualization project directory
  date: 2016-06-09
  publish-date: 2016-07-09
  path: /notsure
  description: >-
    Bare-bones example visualization project directory for testing vizlab
  keywords: vizlab, visualizations, data, R
  mimetypeDictionary: moreMimetypes.yaml
  twitter: "@USGS_R"
  owner:
    name: <NAME>
    email: <EMAIL>
    affiliation: U.S. Geological Survey
  contributors:
    -
      name: <NAME>
      email: <EMAIL>
      affiliation: U.S. Geological Survey
    -
      name: <NAME>
      email: <EMAIL>
      affiliation: U.S. Geological Survey
    -
      name: <NAME>
      email: <EMAIL>
      affiliation: U.S. Geological Survey
    -
      name: <NAME>
      email: <EMAIL>
      affiliation: U.S. Geological Survey
    -
      name: <NAME>
      email: <EMAIL>
      affiliation: U.S. Geological Survey
  thumbnail:
    url: images/thumbnail.png
    width: 250
    height: 250
    alt: Test for vizlab
fetch:
  -
    id: siteTextData
    location: data/siteText.yaml
    mimetype: text/yaml
  -
    id: Cuyahoga
    location: cache/fetch/CuyahogaTDS.csv
    fetcher: sciencebase
    refetch: false
    remoteItemId: 575d839ee4b04f417c2a03fe
    remoteFilename: CuyahogaTDS.csv
    mimetype: text/csv
  -
    id: MayflyNymph
    location: data/MayflyNymph.csv
    fetcher: mayflyNymph
    scripts: scripts/fetch/mayflyNymph.R
    reader: myCsvReader
    mimetype: text/csv
    export: true
  -
    id: carData
    location: data/car_info
    mimetype: text/csv
    reader: folder
process:
  -
    id: CuyahogaShort
    location: cache/process/CuyahogaShort.tsv
    mimetype: text/tab-separated-values
    scripts: scripts/process/cuyahoga.R
    depends:
      - Cuyahoga
    processor: cuyahoga
visualize:
  -
    id: relativeAbundanceFig
    location: figures/relativeAbundanceFig.svg
    depends: [CuyahogaShort, MayflyNymph]
    visualizer: relativeAbundance
    mimetype: image/svg+xml
    export: false
publish:
  -
    id: appJS
    location: layout/js/app.js
    mimetype: application/javascript
  -
    id: mainCSS
    location: layout/css/main.css
    mimetype: text/css
  -
    id: normalizeCSS
    location: layout/css/normalize.css
    mimetype: text/css
  -
    id: index
    name: index
    template: layout/templates/index.mustache
    depends: [ appJS, mainCSS, normalizeCSS ]
    publisher: page
    context: 
      title: testViz
      sections: [ header, intro, relativeAbundance, footer ]
  -
    id: header
    template: layout/templates/header.mustache
    context: siteTextData
    publisher: section
  -
{'fraction_non_alphanumeric': 0.08772924938551711, 'fraction_numerical': 0.01474758933635848, 'mean_word_length': 2.559892328398385, 'pattern_counts': {'":': 0, '<': 27, '<?xml version=': 0, '>': 29, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 2}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '771396', 'n_tokens_mistral': 1889, 'n_tokens_neox': 1814, 'n_words': 426}