<commit_before><project name="genomic-test-dbmodel" default="default" basedir=".">

  <description>represents the production objectstore and the model therein</description>
  <import file="../../../imbuild/objectstore.xml"/>


  <target name="create-so-model" depends="init, -init-deps">
    <taskdef name="so-model" classname="org.intermine.bio.task.SOToModelTask">
      <classpath refid="task.class.path"/>
    </taskdef>
    <so-model
       soTermListFile="${so.termlist.file}"
       soFile="${so.obo.file}"
       outputFile="${so.output.file}"/>
  </target>

  <target name="-pre-init-merge" depends="create-so-model"/>


  <target name="-merge-models" if="doing.build.db">
    <merge-additions file="bio/test-all/dbmodel/build/model/so_additions.xml"/>
    <merge-additions file="bio/core/genomic_additions.xml"/>
    <merge-additions file="bio/sources/human/ncbi-gene/ncbi-gene_additions.xml"/>
    <merge-additions file="bio/sources/human/huge-gwas/huge-gwas_additions.xml"/>
    <merge-additions file="bio/sources/psi/psi_additions.xml"/>
    <merge-additions file="bio/sources/fly/rnai/rnai_additions.xml"/>
    <merge-additions file="bio/sources/go/go_additions.xml"/>
    <merge-additions file="bio/sources/go-annotation/go-annotation_additions.xml"/>
    <merge-additions file="bio/sources/uniprot/uniprot_additions.xml"/>
    <merge-additions file="bio/sources/pdb/pdb_additions.xml"/>
    <merge-additions file="bio/sources/fly/flyreg/flyreg_additions.xml"/>
    <merge-additions file="bio/sources/fly/long-oligo/long-oligo_additions.xml"/>
    <merge-additions file="bio/sources/chado-db/chado-db_additions.xml"/>
    <merge-additions file="bio/sources/chado-db/flybase-chado-db_additions.xml"/>
    <merge-additions file="bio/sources/interpro/interpro_additions.xml"/>
    <merge-additions file="bio/sources/fly/bdgp-clone/bdgp-clone_additions.xml"/>
    <merge-additions file="bio/sources/fly/drosdel-gff/drosdel-gff_additions.xml"/>
    <merge-additions file="bio/sources/fly/redfly/redfly_additions.xml"/>
    <merge-additions file="bio/sources/fly/affy-probes/affy-probes_additions.xml"/>
    <merge-additions file="bio/sources/fly/arbeitman-items-xml/arbeitman-items-xml_additions.xml"/>
    <merge-additions file="bio/sources/fly/flyatlas/flyatlas_additions.xml"/>
    <merge-additions file="bio/sources/kegg-pathway/kegg-pathway_additions.xml"/>
    <merge-additions file="bio/sources/fly/fly-fish/fly-fish_additions.xml"/>
    <merge-additions file="bio/sources/mosquito/anoph-expr/anoph-expr_additions.xml"/>
    <merge-additions file="bio/sources/fly/bdgp-insitu/bdgp-insitu_additions.xml"/>
    <merge-additions file="bio/sources/biogrid/biogrid_additions.xml"/>
    <merge-additions file="bio/sources/treefam/treefam_additions.xml"/>
    <merge-additions file="bio/sources/interpro-go/interpro-go_additions.xml"/>
    <merge-additions file="bio/sources/human/protein-atlas/protein-atlas_additions.xml"/>
    <merge-additions file="bio/sources/human/ncbi-summaries/ncbi-summaries_additions.xml"/>
    <merge-additions file="bio/sources/psi-mi-ontology/psi-mi-ontology_additions.xml"/>
    <merge-additions file="bio/sources/fly/flybase-expression/flybase-expression_additions.xml"/>
    <merge-additions file="bio/sources/panther/panther_additions.xml"/>
    <merge-additions file="bio/sources/homologene/homologene_additions.xml"/>
    <merge-additions file="bio/sources/orthodb/orthodb_additions.xml"/>
    <merge-additions file="bio/sources/human/hpo-annotation/hpo-annotation_additions.xml"/>
    <merge-additions file="bio/sources/ensembl/ensembl-snp/ensembl-snp_additions.xml"/>
  </target>

</project><commit_msg>add new source to test<commit_after><project name="genomic-test-dbmodel" default="default" basedir=".">

  <description>represents the production objectstore and the model therein</description>
  <import file="../../../imbuild/objectstore.xml"/>


  <target name="create-so-model" depends="init, -init-deps">
    <taskdef name="so-model" classname="org.intermine.bio.task.SOToModelTask">
      <classpath refid="task.class.path"/>
    </taskdef>
    <so-model
       soTermListFile="${so.termlist.file}"
       soFile="${so.obo.file}"
       outputFile="${so.output.file}"/>
  </target>

  <target name="-pre-init-merge" depends="create-so-model"/>


  <target name="-merge-models" if="doing.build.db">
    <merge-additions file="bio/test-all/dbmodel/build/model/so_additions.xml"/>
    <merge-additions file="bio/core/genomic_additions.xml"/>
    <merge-additions file="bio/sources/human/ncbi-gene/ncbi-gene_additions.xml"/>
    <merge-additions file="bio/sources/human/huge-gwas/huge-gwas_additions.xml"/>
    <merge-additions file="bio/sources/psi/psi_additions.xml"/>
    <merge-additions file="bio/sources/fly/rnai/rnai_additions.xml"/>
    <merge-additions file="bio/sources/go/go_additions.xml"/>
    <merge-additions file="bio/sources/go-annotation/go-annotation_additions.xml"/>
    <merge-additions file="bio/sources/uniprot/uniprot_additions.xml"/>
    <merge-additions file="bio/sources/pdb/pdb_additions.xml"/>
    <merge-additions file="bio/sources/fly/flyreg/flyreg_additions.xml"/>
    <merge-additions file="bio/sources/fly/long-oligo/long-oligo_additions.xml"/>
    <merge-additions file="bio/sources/chado-db/chado-db_additions.xml"/>
    <merge-additions file="bio/sources/chado-db/flybase-chado-db_additions.xml"/>
    <merge-additions file="bio/sources/interpro/interpro_additions.xml"/>
    <merge-additions file="bio/sources/fly/bdgp-clone/bdgp-clone_additions.xml"/>
    <merge-additions file="bio/sources/fly/drosdel-gff/drosdel-gff_additions.xml"/>
    <merge-additions file="bio/sources/fly/redfly/redfly_additions.xml"/>
    <merge-additions file="bio/sources/fly/affy-probes/affy-probes_additions.xml"/>
    <merge-additions file="bio/sources/fly/arbeitman-items-xml/arbeitman-items-xml_additions.xml"/>
    <merge-additions file="bio/sources/fly/flyatlas/flyatlas_additions.xml"/>
    <merge-additions file="bio/sources/kegg-pathway/kegg-pathway_additions.xml"/>
    <merge-additions file="bio/sources/fly/fly-fish/fly-fish_additions.xml"/>
    <merge-additions file="bio/sources/mosquito/anoph-expr/anoph-expr_additions.xml"/>
    <merge-additions file="bio/sources/fly/bdgp-insitu/bdgp-insitu_additions.xml"/>
    <merge-additions file="bio/sources/biogrid/biogrid_additions.xml"/>
    <merge-additions file="bio/sources/treefam/treefam_additions.xml"/>
    <merge-additions file="bio/sources/interpro-go/interpro-go_additions.xml"/>
    <merge-additions file="bio/sources/human/protein-atlas/protein-atlas_additions.xml"/>
    <merge-additions file="bio/sources/human/ncbi-summaries/ncbi-summaries_additions.xml"/>
    <merge-additions file="bio/sources/psi-mi-ontology/psi-mi-ontology_additions.xml"/>
    <merge-additions file="bio/sources/fly/flybase-expression/flybase-expression_additions.xml"/>
    <merge-additions file="bio/sources/panther/panther_additions.xml"/>
    <merge-additions file="bio/sources/homologene/homologene_additions.xml"/>
    <merge-additions file="bio/sources/orthodb/orthodb_additions.xml"/>
    <merge-additions file="bio/sources/human/hpo-annotation/hpo-annotation_additions.xml"/>
    <merge-additions file="bio/sources/ensembl/ensembl-snp/ensembl-snp_additions.xml"/>
    <merge-additions file="bio/sources/reactome/reactome_additions.xml"/>
  </target>

</project>
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