<commit_before>{{$NEXT}}

 * The arrow keys on the keyboard can now be used to pan and scroll
   around the genome view.

 * `ucsc-to-json.pl` now supports a `--primaryName` option allowing
   the users to alter which UCSC data field is displayed by JBrowse as
   the primary name of the features in a track.  Also,
   `ucsc-to-json.pl` now treats as indexable names all UCSC data
   columns called "name", "alias", or "id" followed by zero or more
   digits.  Thanks to <NAME> for this suggestion.

 * Fixed "Duplicate specification" warnings coming from
   `flatfile-to-json.pl` and `remove-track.pl`.

 * Fixed bug with the last few bases of a reference sequence not
   displaying correctly in a DNA track.

1.6.4     2012-10-16 11:50:44 America/New_York<commit_msg>update release notes<commit_after>{{$NEXT}}

 * The arrow keys on the keyboard can now be used to pan and scroll
   around the genome view.

 * `prepare-refseqs.pl` now by default uses a more scalable directory
   structure for storing sequences.  This fixes problems some users
   were experiencing with large numbers of reference sequences (issue
   #139).

 * `ucsc-to-json.pl` now supports a `--primaryName` option allowing
   the users to alter which UCSC data field is displayed by JBrowse as
   the primary name of the features in a track.  Also,
   `ucsc-to-json.pl` now treats as indexable names all UCSC data
   columns called "name", "alias", or "id" followed by zero or more
   digits.  Thanks to <NAME> for this suggestion.

 * Fixed "Duplicate specification" warnings coming from
   `flatfile-to-json.pl` and `remove-track.pl`.

 * Fixed bug in which the last few bases of a reference sequence were
   not displaying correctly in a DNA track.

1.6.4     2012-10-16 11:50:44 America/New_York
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