<commit_before>require 'formula'

class Samtools <Formula
  url 'http://sourceforge.net/projects/samtools/files/samtools/0.1.12/samtools-0.1.12a.tar.bz2'
  homepage 'http://samtools.sourceforge.net/'
  md5 '500ae32fb431de3940e0e955744b9b36'

  def install
    # -s is needed on OS X here.
    inreplace ["Makefile", "bcftools/Makefile"], "$(AR)", "$(AR) -s"

    system "make"
    system "make razip"

    bin.install %w{samtools razip}
    prefix.install %w{examples misc}
    lib.install 'libbam.a'
    (include+'bam').install Dir['*.h']
  end
end<commit_msg>samtools 0.1.13<commit_after>require 'formula'

class Samtools <Formula
  url 'http://sourceforge.net/projects/samtools/files/samtools/0.1.13/samtools-0.1.13.tar.bz2'
  homepage 'http://samtools.sourceforge.net/'
  md5 '2e66b94639f90d10cc935bb145ef71f3'

  def install
    system "make"
    system "make razip"

    bin.install %w{samtools razip}
    prefix.install %w{examples misc}
    lib.install 'libbam.a'
    (include+'bam').install Dir['*.h']
  end
end
{'fraction_non_alphanumeric': 0.14901960784313725, 'fraction_numerical': 0.06568627450980392, 'mean_word_length': 3.705069124423963, 'pattern_counts': {'":': 0, '<': 5, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '4197753', 'n_tokens_mistral': 438, 'n_tokens_neox': 394, 'n_words': 73}