<commit_before># 5Beam-Turbulence-Methods

A set of codes to process turbulence data from a 5-beam Accoustic Doppler Current Profiler (specifically the Nortek Signature 1000 AD2CP).


The following turbulence parameters can be estimated using this scripts and functions:

1. Turbulent kinetic energy dissipation rate from TKE frequency spectra and structure function
2. Reynolds stressses using all 5 beam information and tilt corrections 
3. Turbulent kinetic energy vertical shear production 

Plotting functions are also included.

The 5beamMethods_Document.pdf file contains a detailed explanation of each of the scripts and functions.

The following working directory is recomended to use this scripts:

    5Beam-Turbulence-Methods/
    	README.md
    	5BeamMethods_Document.pdf
    	Guerra_Thomson_FiveBeamMethods_Submitted_2016.pdf
    	RS_5beam.m
    	RS_VT.m
    	Signature_E_P_Profile_Plots.m
    	Signature_Production_5beam.m
    	Signature_QC.m
    	Signature_RawData_ENU.m
    	Signature_Reynolds_Stress_5Beam.m
    	Signature_Spectra_DissipationRate.m
    	Signature_Spectra_Plots.m
    	Signature_Spectra_w.m
    	Signature_StructureFunction_Plots.m
    	Signature_StructureFunction_dissipation.m
    	Signature_Usigned.m
    	Signature_join_files.m
    	dissipationMG_SF.m
    	sign_speed.m
    	signatureAD2CP_beam2xyz_enu.m
    	spectralestimate.m
    	structureFunction.m
    	BinDataSignature/ 
    	RawData/ %put raw data from MIDAS software here
    	SDF_Signtaure/
    	Signature_Dissipation/
    	Signature_Production/


This work has been submitted for publication to the Journal of Atmospheric and Oceanic Technology on July 28 2016 as <NAME>. and <NAME>. "Turbulence measurements from 5-beam acoustic Doppler profilers".


For any comments and suggestions please contact me at <EMAIL><commit_msg>Added paper DOI to readme<commit_after># 5Beam-Turbulence-Methods

A set of codes to process turbulence data from a 5-beam Accoustic Doppler Current Profiler (specifically the Nortek Signature 1000 AD2CP).


The following turbulence parameters can be estimated using this scripts and functions:

1. Turbulent kinetic energy dissipation rate from TKE frequency spectra and structure function
2. Reynolds stressses using all 5 beam information and tilt corrections 
3. Turbulent kinetic energy vertical shear production 

Plotting functions are also included.

The 5beamMethods_Document.pdf file contains a detailed explanation of each of the scripts and functions.

The following working directory is recomended to use this scripts:

    5Beam-Turbulence-Methods/
    	README.md
    	5BeamMethods_Document.pdf
    	Guerra_Thomson_FiveBeamMethods_Submitted_2016.pdf
    	RS_5beam.m
    	RS_VT.m
    	Signature_E_P_Profile_Plots.m
    	Signature_Production_5beam.m
    	Signature_QC.m
    	Signature_RawData_ENU.m
    	Signature_Reynolds_Stress_5Beam.m
    	Signature_Spectra_DissipationRate.m
    	Signature_Spectra_Plots.m
    	Signature_Spectra_w.m
    	Signature_StructureFunction_Plots.m
    	Signature_StructureFunction_dissipation.m
    	Signature_Usigned.m
    	Signature_join_files.m
    	dissipationMG_SF.m
    	sign_speed.m
    	signatureAD2CP_beam2xyz_enu.m
    	spectralestimate.m
    	structureFunction.m
    	BinDataSignature/ 
    	RawData/ %put raw data from MIDAS software here
    	SDF_Signtaure/
    	Signature_Dissipation/
    	Signature_Production/


This work is published on the Journal of Atmospheric and Oceanic Technology as Guerra, M. and <NAME>. "Turbulence measurements from 5-beam acoustic Doppler profilers", and is available for open access at https://doi.org/10.1175/JTECH-D-16-0148.1 

For any comments and suggestions please contact me at <EMAIL>
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