<commit_before>{
  "name": "pileup",
  "version": "0.4.0",
  "description": "JavaScript track viewer",
  "keywords": [
    "genome",
    "track",
    "bam",
    "gene",
    "bioinformatics",
    "genomics",
    "sequencing",
    "reads",
    "interactive",
    "biojs"
  ],
  "main": "dist/main/pileup.js",
  "browser": "dist/main/pileup.js",
  "files": [
    "dist",
    "style"
  ],
  "repository": {
    "type": "git",
    "url": "https://github.com/hammerlab/pileup.js.git"
  },
  "scripts": {
    "jstransform": "./scripts/jstransform.sh",
    "jstransform-watch": "./scripts/jstransform.sh --watch",
    "browserify-all": "npm run browserify && npm run browserify-test",
    "browserify": "browserify -r .:pileup -v -t [ envify --NODE_ENV production ] --debug -o dist/pileup.js",
    "watch-dist": "watchify -r .:pileup -v -t [ envify --NODE_ENV development ] --debug -o dist/pileup.js",
    "browserify-test": "browserify dist/test/*.js -v --debug -o dist/tests.js",
    "watch": "./scripts/watch.sh",
    "watch-test": "watchify dist/test/*.js -v --debug -o dist/tests.js",
    "uglify": "uglifyjs --compress --mangle -o dist/pileup.min.js dist/pileup.js",
    "lint": "./scripts/lint.sh",
    "http-server": "http-server .",
    "test": "./scripts/test.sh",
    "flow": "flow status",
    "flow-check": "flow check",
    "coverage": "./scripts/generate-coverage.sh",
    "sniper": "biojs-sniper",
    "build": "npm run jstransform && npm run browserify-all && npm run uglify"
  },
  "author": "<NAME>",
  "contributors": [
    {
      "name": "<NAME>",
      "email": "<EMAIL>"
    }
  ],
  "license": "Apache-2.0",
  "bugs": {
    "url": "https://github.com/hammerlab/pileup.js/issues"
  },
  "homepage": "https://github.com/hammerlab/pileup.js",
  "prepush": [
    "lint"
  ],
  "dependencies": {
    "backbone": "1.1.2",
    "d3": "^3.5.5",
    "data-canvas": "0.0.0",
    "jbinary": "^2.1.3",
    "jdataview": "^2.5.0",
    "pako": "^0.2.5",
    "q": "^1.1.2",
    "react": "^0.13.2",
    "shallow-equals": "0.0.0",
    "underscore": "^1.7.0"
  },
  "devDependencies": {
    "arraybuffer-slice": "^0.1.2",
    "browserify": "^10.2.4",
    "chai": "^2.0.0",
    "coveralls": "2.10.x",
    "envify": "^3.4.0",
    "es5-shim": "^4.1.0",
    "flow-bin": "^0.16.0",<commit_msg>Update to Flow 0.17<commit_after>{
  "name": "pileup",
  "version": "0.4.0",
  "description": "JavaScript track viewer",
  "keywords": [
    "genome",
    "track",
    "bam",
    "gene",
    "bioinformatics",
    "genomics",
    "sequencing",
    "reads",
    "interactive",
    "biojs"
  ],
  "main": "dist/main/pileup.js",
  "browser": "dist/main/pileup.js",
  "files": [
    "dist",
    "style"
  ],
  "repository": {
    "type": "git",
    "url": "https://github.com/hammerlab/pileup.js.git"
  },
  "scripts": {
    "jstransform": "./scripts/jstransform.sh",
    "jstransform-watch": "./scripts/jstransform.sh --watch",
    "browserify-all": "npm run browserify && npm run browserify-test",
    "browserify": "browserify -r .:pileup -v -t [ envify --NODE_ENV production ] --debug -o dist/pileup.js",
    "watch-dist": "watchify -r .:pileup -v -t [ envify --NODE_ENV development ] --debug -o dist/pileup.js",
    "browserify-test": "browserify dist/test/*.js -v --debug -o dist/tests.js",
    "watch": "./scripts/watch.sh",
    "watch-test": "watchify dist/test/*.js -v --debug -o dist/tests.js",
    "uglify": "uglifyjs --compress --mangle -o dist/pileup.min.js dist/pileup.js",
    "lint": "./scripts/lint.sh",
    "http-server": "http-server .",
    "test": "./scripts/test.sh",
    "flow": "flow status",
    "flow-check": "flow check",
    "coverage": "./scripts/generate-coverage.sh",
    "sniper": "biojs-sniper",
    "build": "npm run jstransform && npm run browserify-all && npm run uglify"
  },
  "author": "<NAME>",
  "contributors": [
    {
      "name": "<NAME>",
      "email": "<EMAIL>"
    }
  ],
  "license": "Apache-2.0",
  "bugs": {
    "url": "https://github.com/hammerlab/pileup.js/issues"
  },
  "homepage": "https://github.com/hammerlab/pileup.js",
  "prepush": [
    "lint"
  ],
  "dependencies": {
    "backbone": "1.1.2",
    "d3": "^3.5.5",
    "data-canvas": "0.0.0",
    "jbinary": "^2.1.3",
    "jdataview": "^2.5.0",
    "pako": "^0.2.5",
    "q": "^1.1.2",
    "react": "^0.13.2",
    "shallow-equals": "0.0.0",
    "underscore": "^1.7.0"
  },
  "devDependencies": {
    "arraybuffer-slice": "^0.1.2",
    "browserify": "^10.2.4",
    "chai": "^2.0.0",
    "coveralls": "2.10.x",
    "envify": "^3.4.0",
    "es5-shim": "^4.1.0",
    "flow-bin": "^0.17.0",
{'fraction_non_alphanumeric': 0.2471590909090909, 'fraction_numerical': 0.027316433566433568, 'mean_word_length': 2.652833200319234, 'pattern_counts': {'":': 112, '<': 9, '<?xml version=': 0, '>': 9, 'https://': 6, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '7407892', 'n_tokens_mistral': 1960, 'n_tokens_neox': 1855, 'n_words': 342}