<commit_before>\documentclass[PhD]{ucdavisthesis}

%\usepackage{syntonly}
%\syntaxonly

\tracinggroups=1
\tracingnesting=2

\usepackage{amsmath}
\usepackage{epigraph}
%\usepackage{epigraphhead}
\usepackage{enumitem}
\usepackage{caption}
\usepackage{subcaption}
%\usepackage{subfigure}
\usepackage{subfiles}
\usepackage{fancyref}
\usepackage{hyperref}
\usepackage{gensymb}
\usepackage{siunitx}
\usepackage{upgreek}
\usepackage{booktabs}
\usepackage{multirow}
\usepackage{tikz}
\usepackage{tikz-qtree}
\usepackage[utf8]{inputenc}
% bibliographies
\usepackage[backend=biber,defernumbers=true,sorting=none,style=ieee]{biblatex}
\AtEveryBibitem{%
  \clearfield{note}%
}

\setitemize{noitemsep,topsep=0pt,parsep=0pt,partopsep=0pt}

%\addbibresource[label=abstract]{abstract.bib}
\addbibresource[label=introduction]{introduction.bib}
\addbibresource[label=FishPoo]{FishPoo/FishPoo.bib}
\addbibresource[label=SaltyBugs]{SaltyBugs/SaltyBugs.bib}
\addbibresource[label=NMF]{NMF/NMF.bib}
\addbibresource[label=sterility]{sterility/sterility.bib}
\addbibresource[label=uLakes]{uLakes/uLakes.bib}
\addbibresource[label=IndigoV]{IndigoV/IndigoV.bib}
\addbibresource[label=Chagos]{Chagos/Chagos.bib}
\addbibresource[label=FishJaws]{FishJaws/FishJaws.bib}
\addbibresource[label=pique]{pique/pique.bib}
\addbibresource[label=SpaceGrowth]{SpaceGrowth/SpaceGrowth.bib}
\addbibresource[label=DilutionPlates]{DilutionPlates/DilutionPlates.bib}

\title{Prediction of ecological function in the microbiome using machine learning on the graph spectra of coevolving subnetworks}

\author{<NAME>}
\authordegrees{B.S. (Northeastern University, Boston) 2004}<commit_msg>fixed weird dashed bibentry behavior<commit_after>\documentclass[PhD]{ucdavisthesis}

%\usepackage{syntonly}
%\syntaxonly

\tracinggroups=1
\tracingnesting=2

\usepackage{amsmath}
\usepackage{epigraph}
%\usepackage{epigraphhead}
\usepackage{enumitem}
\usepackage{caption}
\usepackage{subcaption}
%\usepackage{subfigure}
\usepackage{subfiles}
\usepackage{fancyref}
\usepackage{hyperref}
\usepackage{gensymb}
\usepackage{siunitx}
\usepackage{upgreek}
\usepackage{booktabs}
\usepackage{multirow}
\usepackage{tikz}
\usepackage{tikz-qtree}
\usepackage[utf8]{inputenc}
% bibliographies
\usepackage[backend=biber,defernumbers=true,sorting=none,style=ieee,dashed=false]{biblatex}
\AtEveryBibitem{%
  \clearfield{note}%
}

\setitemize{noitemsep,topsep=0pt,parsep=0pt,partopsep=0pt}

%\addbibresource[label=abstract]{abstract.bib}
\addbibresource[label=introduction]{introduction.bib}
\addbibresource[label=FishPoo]{FishPoo/FishPoo.bib}
\addbibresource[label=SaltyBugs]{SaltyBugs/SaltyBugs.bib}
\addbibresource[label=NMF]{NMF/NMF.bib}
\addbibresource[label=sterility]{sterility/sterility.bib}
\addbibresource[label=uLakes]{uLakes/uLakes.bib}
\addbibresource[label=IndigoV]{IndigoV/IndigoV.bib}
\addbibresource[label=Chagos]{Chagos/Chagos.bib}
\addbibresource[label=FishJaws]{FishJaws/FishJaws.bib}
\addbibresource[label=pique]{pique/pique.bib}
\addbibresource[label=SpaceGrowth]{SpaceGrowth/SpaceGrowth.bib}
\addbibresource[label=DilutionPlates]{DilutionPlates/DilutionPlates.bib}

\title{Prediction of ecological function in the microbiome using machine learning on the graph spectra of coevolving subnetworks}

\author{<NAME>}
\authordegrees{B.S. (Northeastern University, Boston) 2004}
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