<commit_before>#!/bin/bash
#SBATCH --job-name="AdaptiveTest"
#SBATCH -D .
#SBATCH --output=AdaptiveTest.out
#SBATCH --error=AdaptiveTest.err
#SBATCH --ntasks=1
#SBATCH --cpus-per-task=5
#SBATCH --time=01:45:00
#SBATCH --qos=debug


python runAllTests.py --exclude MD_CUDA<commit_msg>Modify runAllTests.sl so it can be run automatically<commit_after>#!/bin/bash
#SBATCH --job-name="AdaptiveTest"
#SBATCH -D .
#SBATCH --output=AdaptiveTest.out
#SBATCH --error=AdaptiveTest.err
#SBATCH --ntasks=1
#SBATCH --cpus-per-task=5
#SBATCH --time=01:45:00
#SBATCH --qos=debug


module purge #2> /dev/null
module load intel mkl impi gcc # 2> /dev/null
module load python/2.7.13 # 2> /dev/null
module load boost/1.64.0_py2 # 2> /dev/null
export PYTHONPATH="/home/bsc72/bsc72021/adaptiveSampling/AdaptiveSampling"
export PYTHONPATH="/gpfs/projects/bsc72/MSM_PELE/bin:/home/bsc72/bsc72021/python-tools:$PYTHONPATH"
export PYTHONPATH="$PYTHONPATH:/gpfs/projects/bsc72/lib/site-packages"
python runAllTests.py --exclude MD_CUDA MD R

module purge 2> /dev/null
module load intel mkl impi  2> /dev/null #boost/1.64.0_py2 gcc 2> /dev/null
module load ANACONDA/5.0.1 2> /dev/null
module load ambertools/17 2> /dev/null
export PYTHONPATH="/home/bsc72/bsc72021/adaptiveSampling/AdaptiveSampling"
export PYTHONPATH="/gpfs/projects/bsc72/MSM_PELE/bin:/home/bsc72/bsc72021/python-tools:$PYTHONPATH"
export PYTHONPATH="$PYTHONPATH:/gpfs/projects/bsc72/lib/python3"

python runAllTests.py --run MD R
{'fraction_non_alphanumeric': 0.14829931972789115, 'fraction_numerical': 0.05510204081632653, 'mean_word_length': 4.791338582677166, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 12, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '7629559', 'n_tokens_mistral': 662, 'n_tokens_neox': 596, 'n_words': 114}