<commit_before>#!/bin/bash
ottdir="${1}"
phyloranking="${2}"
if ! test -d "${ottdir}"
then
    echo "build-from-newicks.sh: expecting the first argument to be an argument to the taxonomy directory"<commit_msg>build-from-newicks.sh using OTT_DIR like the makefiles<commit_after>#!/bin/bash
ottdir="${OTT_DIR}"
phyloranking="${1}"
if ! test -d "${ottdir}"
then
    echo "build-from-newicks.sh: expecting OTT_DIR to be in your environment and to specify the taxonomy directory"
{'fraction_non_alphanumeric': 0.14135021097046413, 'fraction_numerical': 0.006329113924050633, 'mean_word_length': 5.418918918918919, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '4768122', 'n_tokens_mistral': 162, 'n_tokens_neox': 152, 'n_words': 49}