<commit_before>## 1.0.6 (in progress)

- CWL: support structural variant calling as part of variant pipelines.

## 1.0.5 (11 Sept 2017)

- Add optional downsampling whole genome BAM files to a high maximum coverage
  (200 times the average coverage) to avoid slow runtimes in collapsed repeats<commit_msg>Update with pizzly addition.<commit_after>## 1.0.6 (in progress)

- CWL: support structural variant calling as part of variant pipelines.
- Add pizzly (http://www.biorxiv.org/content/early/2017/07/20/166322) as a fusion caller when fusion mode is 
  enabled.

## 1.0.5 (11 Sept 2017)

- Add optional downsampling whole genome BAM files to a high maximum coverage
  (200 times the average coverage) to avoid slow runtimes in collapsed repeats
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