<commit_before>.. _index:

=======================================
qiprofile: Quantitative Imaging Profile
=======================================

********
Synopsis
********
The Quantitative Imaging Profile web application displays imaging and clinical
data for the `OHSU QIN Sharepoint`_ study.

:Git: <EMAIL>:qiprofile


************
Feature List
************
1. OHSU QIN patient MR visualization.

2. ROI capture.

3. Clincial annotation editor.

4. qipipe_ pharmokinetic modeling result display.


************
Installation
************
1. Install Git_ on your workstation.

2. Contact the `OHSU QIN Git administrator`_ to obtain permission
   to access the ``qiprofile`` Git repository.

3. Clone the `qiprofile repository`_::

       cd ~/workspace
       git clone git@quip1:qiprofile

4. Download npm_.

5. Run the following in a console from the ``qiprofile`` directory::

       npm install --production

6. Ensure that the file ``bin/qiprofile`` is executable.


*****
Usage
*****
Run the following command to start the server::

     ./bin/qiprofile

---------

.. container:: copyright

  Copyright (C) 2014 Oregon Health & Science University `Knight Cancer Institute`_.
  All rights reserved.
  ``qiprofile`` is confidential and may not be distributed in any form without authorization.


.. Targets:

.. _Git: http://www.git-scm.com

.. _Knight Cancer Institute: http://www.ohsu.edu/xd/health/services/cancer

.. _OHSU QIN Git administrator: <EMAIL>

.. _OHSU QIN Sharepoint: https://bridge.ohsu.edu/research/knight/projects/qin/SitePages/Home.aspx

.. _npm: https://www.npmjs.org/

.. _qipipe: http://quip1.ohsu.edu:8080/qipipe

.. _qiprofile repository: http://quip1.ohsu.edu:6060/qiprofile


.. toctree::
  :hidden:

  api/index
  api/helpers
  api/interfaces
  api/pipeline
  api/staging<commit_msg>Remove unused index.<commit_after>.. _index:

=======================================
qiprofile: Quantitative Imaging Profile
=======================================

********
Synopsis
********
The Quantitative Imaging Profile web application displays imaging and clinical
data for the `OHSU QIN Sharepoint`_ study.

:Git: <EMAIL>:qiprofile


************
Feature List
************
1. OHSU QIN patient MR visualization.

2. ROI capture.

3. Clincial annotation editor.

4. qipipe_ pharmokinetic modeling result display.


************
Installation
************
1. Install Git_ on your workstation.

2. Contact the `OHSU QIN Git administrator`_ to obtain permission
   to access the ``qiprofile`` Git repository.

3. Clone the `qiprofile repository`_::

       cd ~/workspace
       git clone git@quip1:qiprofile

4. Download npm_.

5. Run the following in a console from the ``qiprofile`` directory::

       npm install --production

6. Ensure that the file ``bin/qiprofile`` is executable.


*****
Usage
*****
Run the following command to start the server::

     ./bin/qiprofile

---------

.. container:: copyright

  Copyright (C) 2014 Oregon Health & Science University `Knight Cancer Institute`_.
  All rights reserved.
  ``qiprofile`` is confidential and may not be distributed in any form without authorization.


.. Targets:

.. _Git: http://www.git-scm.com

.. _Knight Cancer Institute: http://www.ohsu.edu/xd/health/services/cancer

.. _OHSU QIN Git administrator: <EMAIL>

.. _OHSU QIN Sharepoint: https://bridge.ohsu.edu/research/knight/projects/qin/SitePages/Home.aspx

.. _npm: https://www.npmjs.org/

.. _qipipe: http://quip1.ohsu.edu:8080/qipipe

.. _qiprofile repository: http://quip1.ohsu.edu:6060/qiprofile
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