<commit_before>sudo: required

language: java

jdk: openjdk8

services:
  - docker

env:
  - NXF_VER=0.25.6 SGT_VER=2.3.1

install:
  - curl -fsSL get.nextflow.io | bash
  - chmod +x nextflow
  - sudo mv nextflow /usr/local/bin/
  - wget https://github.com/singularityware/singularity/releases/download/$SGT_VER/singularity-$SGT_VER.tar.gz
  - tar xvf singularity-$SGT_VER.tar.gz
  - cd singularity-$SGT_VER
  - ./configure --prefix=/usr/local
  - make
  - sudo make install
  - cd ..
  - rm -rf singularity-$SGT_VER*

script:
  - ./scripts/test_docker.sh
  - ./scripts/test_singularity.sh
<commit_msg>use matrixes for parralel testing<commit_after>sudo: required

language: java

jdk: openjdk8

services:
  - docker

env:
  - NXF_VER=0.25.6 SGT_VER=2.3.1 s=test_docker
  - NXF_VER=0.25.6 SGT_VER=2.3.1 s=test_singularity

install:
  - curl -fsSL get.nextflow.io | bash
  - chmod +x nextflow
  - sudo mv nextflow /usr/local/bin/
  - wget https://github.com/singularityware/singularity/releases/download/$SGT_VER/singularity-$SGT_VER.tar.gz
  - tar xvf singularity-$SGT_VER.tar.gz
  - cd singularity-$SGT_VER
  - ./configure --prefix=/usr/local
  - make
  - sudo make install
  - cd ..
  - rm -rf singularity-$SGT_VER*

script:
  - "./${s}.sh"

{'fraction_non_alphanumeric': 0.13837489943684633, 'fraction_numerical': 0.01850362027353178, 'mean_word_length': 2.8996865203761755, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 2, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 2, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '1137248', 'n_tokens_mistral': 534, 'n_tokens_neox': 498, 'n_words': 93}