<commit_before><div class="navbar-inner">
    <div class="container-fluid">
        <a class="btn btn-navbar" data-toggle="collapse" data-target=".nav-collapse">
            <span class="icon-bar"></span>
            <span class="icon-bar"></span>
            <span class="icon-bar"></span>
        </a>
        <a class="brand" href="#homePage" onclick="return false;" id="home">
            <img src="img/isblogo.png" class="imgbrand" alt="QED"> <b>QED</b>
        </a>

        <div class="nav-collapse">
            <ul class="nav nav-pills pull-center">
                <li class="dropdown">
                    <a class="dropdown-toggle" data-toggle="dropdown" href="#">Analysis <b class="caret"></b></a>
                    <ul class="dropdown-menu">
                        <li><a href="#mds/fig1/graph">Pairwise - MDS</a></li>
                        <li><a href="#pairwise/continuous_pwpv_0.5/graph">Pairwise - Fiedler</a></li>
                        <li><a href="#information_gain/sample_associations/circ">Information Gain - Markers</a></li>                       
                        <li><a href="#rf-ace/cons_predictor_12800_cutoff_29.0/graph">RF-ACE - Predictor Trees</a></li>
                        <!--li><a href="#information_gain/sample_associations/circ">I()</a></li-->
                    </ul>
                </li>
                 <li class="dropdown">
                    <a class="dropdown-toggle" data-toggle="dropdown" href="#">Data<b class="caret"></b></a>
                    <ul class="dropdown-menu">
                        <li><a href="#feature_matrices/2012_09_18_0835__cons/grid">Data Table</a></li>
                        <li><a href="#feature_matrices/2012_09_18_0835__cons/heat">Heatmap</a></li>
                    </ul>
                </li>
                <li class="dropdown">
                    <a class="dropdown-toggle" data-toggle="dropdown" href="#">About <b class="caret"></b></a>
                    <ul class="dropdown-menu">
                        <li><a href="" onclick="return false;">User Guide</a></li>
                        <li><a href="" onclick="return false;">Code Project</a></li>
                        <li><a href="" onclick="return false;">Funding</a></li>
                    </ul>
                </li>
            </ul>
            <form action="" class="pull-left navbar-form">
                <input type="text" id="querySearchTerm" placeholder="Enter Search Term..." class="search-query span3">
                <button class="btn btn-primary" id="queryBtn"><i class="icon-search icon-white"></i></button>
            </form>
        </div>
    </div>
</div>

<div id="searchResults" class="modal hide fade">
    <div class="modal-header">
        <button type="button" class="close" data-dismiss="modal" aria-hidden="true">x</button>
        <h3>Search...</h3>
    </div>
    <div class="modal-body">
    </div>
    <div class="modal-footer">
        <button class="btn" data-dismiss="modal" aria-hidden="true">Close</button>
    </div>
</div><commit_msg>removed commented out code<commit_after><div class="navbar-inner">
    <div class="container-fluid">
        <a class="btn btn-navbar" data-toggle="collapse" data-target=".nav-collapse">
            <span class="icon-bar"></span>
            <span class="icon-bar"></span>
            <span class="icon-bar"></span>
        </a>
        <a class="brand" href="#homePage" onclick="return false;" id="home">
            <img src="img/isblogo.png" class="imgbrand" alt="QED"> <b>QED</b>
        </a>

        <div class="nav-collapse">
            <ul class="nav nav-pills pull-center">
                <li class="dropdown">
                    <a class="dropdown-toggle" data-toggle="dropdown" href="#">Analysis <b class="caret"></b></a>
                    <ul class="dropdown-menu">
                        <li><a href="#mds/fig1/graph">Pairwise - MDS</a></li>
                        <li><a href="#pairwise/continuous_pwpv_0.5/graph">Pairwise - Fiedler</a></li>
                        <li><a href="#information_gain/sample_associations/circ">Information Gain - Markers</a></li>                       
                        <li><a href="#rf-ace/cons_predictor_12800_cutoff_29.0/graph">RF-ACE - Predictor Trees</a></li>
                    </ul>
                </li>
                 <li class="dropdown">
                    <a class="dropdown-toggle" data-toggle="dropdown" href="#">Data<b class="caret"></b></a>
                    <ul class="dropdown-menu">
                        <li><a href="#feature_matrices/2012_09_18_0835__cons/grid">Data Table</a></li>
                        <li><a href="#feature_matrices/2012_09_18_0835__cons/heat">Heatmap</a></li>
                    </ul>
                </li>
                <li class="dropdown">
                    <a class="dropdown-toggle" data-toggle="dropdown" href="#">About <b class="caret"></b></a>
                    <ul class="dropdown-menu">
                        <li><a href="" onclick="return false;">User Guide</a></li>
                        <li><a href="" onclick="return false;">Code Project</a></li>
                        <li><a href="" onclick="return false;">Funding</a></li>
                    </ul>
                </li>
            </ul>
            <form action="" class="pull-left navbar-form">
                <input type="text" id="querySearchTerm" placeholder="Enter Search Term..." class="search-query span3">
                <button class="btn btn-primary" id="queryBtn"><i class="icon-search icon-white"></i></button>
            </form>
        </div>
    </div>
</div>

<div id="searchResults" class="modal hide fade">
    <div class="modal-header">
        <button type="button" class="close" data-dismiss="modal" aria-hidden="true">x</button>
        <h3>Search...</h3>
    </div>
    <div class="modal-body">
    </div>
    <div class="modal-footer">
        <button class="btn" data-dismiss="modal" aria-hidden="true">Close</button>
    </div>
</div>
{'fraction_non_alphanumeric': 0.18347245409015026, 'fraction_numerical': 0.012687813021702838, 'mean_word_length': 1.8942028985507247, 'pattern_counts': {'":': 0, '<': 211, '<?xml version=': 0, '>': 211, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '2737104', 'n_tokens_mistral': 1820, 'n_tokens_neox': 1694, 'n_words': 304}