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  <title>WikiPathways WP Ontology</title>
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<div about="http://vocabularies.wikipathways.org/wp#" typeof="owl:Ontology">
<h1>The <span property="rdfs:label">WikiPathways WP Ontology</span> </h1>
<p>
This page describes the WP ontology for WikiPathways (<code>http://vocabularies.wikipathways.org/wp#</code>). Make sure to visit our <a rel="rdfs:seeAlso" href="http://www.wikipathways.org/">homepage</a>!
</p>
</div>
</div>

<div about="http://vocabularies.wikipathways.org/wpTypes#" typeof="owl:Ontology">
<p>
This ontology is written by (in random order)
<span property="dc:contributor"><NAME></span>,
<span property="dc:contributor"><NAME></span>,
<span property="dc:contributor"><NAME></span>,
<span property="dc:contributor"><NAME></span>,
<span property="dc:contributor"><NAME></span>,
<span property="dc:contributor"><NAME></span>, and
<span property="dc:contributor"><NAME></span>.
</p>
</div>

<section id="_namespaces">
<h2>Namespaces</h2>
<pre>
@prefix wp: &lt;http://vocabularies.wikipathways.org/wp#&gt; .

@prefix rdf: &lt;http://www.w3.org/1999/02/22-rdf-syntax-ns#&gt; .
@prefix rdfs: &lt;http://www.w3.org/2000/01/rdf-schema#&gt; .
@prefix xsd:&lt; http://www.w3.org/2001/XMLSchema#&gt; .
@prefix owl: &lt;http://www.w3.org/2002/07/owl#&gt; .
@prefix skos: &lt;http://www.w3.org/2004/02/skos/core#&gt; .
@prefix dcterms: &lt;http://purl.org/dc/terms/&gt; .
</pre>
</section>

<div about="http://vocabularies.wikipathways.org/wp#" typeof="skos:ConceptScheme">
<div rev="skos:inScheme">

<section id="_classes">

<h2>Classes</h2>
<div id="Binding" about="http://vocabularies.wikipathways.org/wp#Binding" typeof="owl:Class">
<h3 property="rdfs:label">Binding</h3>
<code>wp:Binding</code>
<p><span property="dc:description">A binding interaction between two physical entities resulting in the formation of an explicit complex that is reversible without an external factor (e.g. protein complexes).</span>
Subclass of <a href="http://vocabularies.wikipathways.org/wp#DirectedInteraction" property="rdfs:subClassOf">wp:DirectedInteraction</a>.</p>
</div>
<div id="Catalysis" about="http://vocabularies.wikipathways.org/wp#Catalysis" typeof="owl:Class">
<h3 property="rdfs:label">Catalysis</h3>
<code>wp:Catalysis</code>
<p><span property="dc:description">A catalysis.</span>
Subclass of <a href="http://vocabularies.wikipathways.org/wp#DirectedInteraction" property="rdfs:subClassOf">wp:DirectedInteraction</a>.</p>
</div>
<div id="Complex" about="http://vocabularies.wikipathways.org/wp#Complex" typeof="owl:Class">
<h3 property="rdfs:label">Complex</h3>
<code>wp:Complex</code>
<p>A Complex of compounds. Subclass of <a href="http://vocabularies.wikipathways.org/wp#DataNode" property="rdfs:subClassOf">wp:DataNode</a>.</p>
</div>
<div id="ComplexBinding" about="http://vocabularies.wikipathways.org/wp#ComplexBinding" typeof="owl:Class">
<h3 property="rdfs:label">ComplexBinding</h3>
<code>wp:ComplexBinding</code>
<p>Subclass of <a href="http://vocabularies.wikipathways.org/wp#DirectedInteraction" property="rdfs:subClassOf">wp:Binding</a>.</p>
</div>
<div id="Conversion" about="http://vocabularies.wikipathways.org/wp#Conversion" typeof="owl:Class">
<h3 property="rdfs:label">Conversion</h3>
<code>wp:Conversion</code>
<p>Subclass of <a href="http://vocabularies.wikipathways.org/wp#DirectedInteraction" property="rdfs:subClassOf">wp:DirectedInteraction</a>.</p>
</div>
<div id="DataNode" about="http://vocabularies.wikipathways.org/wp#DataNode" typeof="owl:Class">
<h3 property="rdfs:label">DataNode</h3>
<code>wp:DataNode</code>
</div>
<div id="DirectedInteraction" about="http://vocabularies.wikipathways.org/wp#DirectedInteraction" typeof="owl:Class">
<h3 property="rdfs:label">DirectedInteraction</h3>
<code>wp:DirectedInteraction</code>
<p>Subclass of <a href="http://vocabularies.wikipathways.org/wp#Interaction" property="rdfs:subClassOf">wp:Interaction</a>.</p>
</div>
<div id="GeneProduct" about="http://vocabularies.wikipathways.org/wp#GeneProduct" typeof="owl:Class">
<h3 property="rdfs:label">GeneProduct</h3>
<code>wp:GeneProduct</code>
<p>Subclass of <a href="http://vocabularies.wikipathways.org/wp#DataNode" property="rdfs:subClassOf">wp:DataNode</a>.</p><commit_msg>Last few relations from Neologism to BioPax (closes #9)<commit_after><!DOCTYPE html>
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<head>
  <title>WikiPathways WP Ontology</title>
  <meta http-equiv="Content-Type" content="text/html;charset=UTF-8" /> 

  <!-- bootstrap stuff -->
  <meta charset="utf-8">
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  <link rel="alternate" type="application/rdf+xml" title="RDF/XML" href="http://vocabularies.wikipathways.org/wp">
  <link rel="alternate" type="text/turtle" title="RDF Turtle" href="http://vocabularies.wikipathways.org/wp">
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  <style type="text/css">
  <!--
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    content: " ";
    margin-top: -75px;
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    visibility: hidden;
  }

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  section {
    margin-top: 2em;
  }
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    padding-bottom: 0.4em;
    border-bottom: 1px solid #ddd;
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<div class="container" role="main">

<div class="jumbotron">
<div about="http://vocabularies.wikipathways.org/wp#" typeof="owl:Ontology">
<h1>The <span property="rdfs:label">WikiPathways WP Ontology</span> </h1>
<p>
This page describes the WP ontology for WikiPathways (<code>http://vocabularies.wikipathways.org/wp#</code>). Make sure to visit our <a rel="rdfs:seeAlso" href="http://www.wikipathways.org/">homepage</a>!
</p>
</div>
</div>

<div about="http://vocabularies.wikipathways.org/wpTypes#" typeof="owl:Ontology">
<p>
This ontology is written by (in random order)
<span property="dc:contributor"><NAME></span>,
<span property="dc:contributor"><NAME></span>,
<span property="dc:contributor"><NAME></span>,
<span property="dc:contributor"><NAME></span>,
<span property="dc:contributor"><NAME></span>,
<span property="dc:contributor"><NAME></span>, and
<span property="dc:contributor"><NAME></span>.
</p>
</div>

<section id="_namespaces">
<h2>Namespaces</h2>
<pre>
@prefix wp: &lt;http://vocabularies.wikipathways.org/wp#&gt; .

@prefix rdf: &lt;http://www.w3.org/1999/02/22-rdf-syntax-ns#&gt; .
@prefix rdfs: &lt;http://www.w3.org/2000/01/rdf-schema#&gt; .
@prefix xsd:&lt; http://www.w3.org/2001/XMLSchema#&gt; .
@prefix owl: &lt;http://www.w3.org/2002/07/owl#&gt; .
@prefix skos: &lt;http://www.w3.org/2004/02/skos/core#&gt; .
@prefix dcterms: &lt;http://purl.org/dc/terms/&gt; .
</pre>
</section>

<div about="http://vocabularies.wikipathways.org/wp#" typeof="skos:ConceptScheme">
<div rev="skos:inScheme">

<section id="_classes">

<h2>Classes</h2>
<div id="Binding" about="http://vocabularies.wikipathways.org/wp#Binding" typeof="owl:Class">
<h3 property="rdfs:label">Binding</h3>
<code>wp:Binding</code>
<p><span property="dc:description">A binding interaction between two physical entities resulting in the formation of an explicit complex that is reversible without an external factor (e.g. protein complexes).</span>
Subclass of <a href="http://vocabularies.wikipathways.org/wp#DirectedInteraction" property="rdfs:subClassOf">wp:DirectedInteraction</a>.</p>
</div>
<div id="Catalysis" about="http://vocabularies.wikipathways.org/wp#Catalysis" typeof="owl:Class">
<h3 property="rdfs:label">Catalysis</h3>
<code>wp:Catalysis</code>
<p><span property="dc:description">A catalysis.</span>
Subclass of <a href="http://vocabularies.wikipathways.org/wp#DirectedInteraction" property="rdfs:subClassOf">wp:DirectedInteraction</a>.</p>
</div>
<div id="Complex" about="http://vocabularies.wikipathways.org/wp#Complex" typeof="owl:Class">
<h3 property="rdfs:label">Complex</h3>
<code>wp:Complex</code>
<p>A Complex of compounds. Subclass of <a href="http://vocabularies.wikipathways.org/wp#DataNode" property="rdfs:subClassOf">wp:DataNode</a>.</p>
</div>
<div id="ComplexBinding" about="http://vocabularies.wikipathways.org/wp#ComplexBinding" typeof="owl:Class">
<h3 property="rdfs:label">ComplexBinding</h3>
<code>wp:ComplexBinding</code>
<p>Subclass of <a href="http://vocabularies.wikipathways.org/wp#DirectedInteraction" property="rdfs:subClassOf">wp:Binding</a>.</p>
</div>
<div id="Conversion" about="http://vocabularies.wikipathways.org/wp#Conversion" typeof="owl:Class">
<h3 property="rdfs:label">Conversion</h3>
<code>wp:Conversion</code>
<p>Subclass of <a href="http://vocabularies.wikipathways.org/wp#DirectedInteraction" property="rdfs:subClassOf">wp:DirectedInteraction</a>.</p>
</div>
<div id="DataNode" about="http://vocabularies.wikipathways.org/wp#DataNode" typeof="owl:Class">
<h3 property="rdfs:label">DataNode</h3>
<code>wp:DataNode</code>
</div>
<div id="DirectedInteraction" about="http://vocabularies.wikipathways.org/wp#DirectedInteraction" typeof="owl:Class">
<h3 property="rdfs:label">DirectedInteraction</h3>
<code>wp:DirectedInteraction</code>
<p>Subclass of <a href="http://vocabularies.wikipathways.org/wp#Interaction" property="rdfs:subClassOf">wp:Interaction</a>.</p>
</div>
<div id="GeneProduct" about="http://vocabularies.wikipathways.org/wp#GeneProduct" typeof="owl:Class">
<h3 property="rdfs:label">GeneProduct</h3>
<code>wp:GeneProduct</code>
<p>Subclass of <a href="http://vocabularies.wikipathways.org/wp#DataNode" property="rdfs:subClassOf">wp:DataNode</a>.</p>
The BioPax class
  <div about="http://www.biopax.org/release/biopax-level3.owl#Dna">
    <a href="http://www.biopax.org/release/biopax-level3.owl#Dna">biopax:Dna</a>
    is a subclass of <a property="rdfs:subClassOf" href="http://vocabularies.wikipathways.org/wp#GeneProduct">wp:GeneProduct</span></div>.
The BioPax class
  <div about="http://www.biopax.org/release/biopax-level3.owl#Gene">
    <a href="http://www.biopax.org/release/biopax-level3.owl#Gene">biopax:Gene</a>
    is a subclass of <a property="rdfs:subClassOf" href="http://vocabularies.wikipathways.org/wp#GeneProduct">wp:GeneProduct</span></div>.
The BioPax class
  <div about="http://www.biopax.org/release/biopax-level3.owl#Rna">
    <a href="http://www.biopax.org/release/biopax-level3.owl#Rna">biopax:Rna</a>
    is a subclass of <a property="rdfs:subClassOf" href="http://vocabularies.wikipathways.org/wp#GeneProduct">wp:GeneProduct</span></div>.
The BioPax class
  <div about="http://www.biopax.org/release/biopax-level3.owl#Protein">
    <a href="http://www.biopax.org/release/biopax-level3.owl#Protein">biopax:Protein</a>
    is a subclass of <a property="rdfs:subClassOf" href="http://vocabularies.wikipathways.org/wp#GeneProduct">wp:GeneProduct</span></div>.
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