<commit_before># This file specifies the how to access local postgres databases used for
# building and running and InterMine.bio warehouse.  Also some configuration
# of InterMine behaviour.

#######################
# database properties #
#######################

# if true will log details about execution time of every query
os.production.verboseQueryLog=true

# Access to the postgres database to build into and access from the webapp
db.production.datasource.serverName=localhost
db.production.datasource.databaseName=malariamine
db.production.datasource.user=PSQL_USER
db.production.datasource.password=<PASSWORD>

# Temporary database used during the build process, this is re-built
# as sources are loaded and can be discarded once the warehouse build is complete
# It uses the InterMine 'items' metadata format to describe objects.

# common target items database
db.common-tgt-items.datasource.serverName=localhost
db.common-tgt-items.datasource.databaseName=items-malariamine
db.common-tgt-items.datasource.user=PSQL_USER
db.common-tgt-items.datasource.password=<PASSWORD>


# userprofile database - used by the webapp to store logins, query history,
# saved bags, templates and tags.
db.userprofile-production.datasource.serverName=localhost
db.userprofile-production.datasource.databaseName=userprofile-malariamine
db.userprofile-production.datasource.user=PSQL_USER
db.userprofile-production.datasource.password=<PASSWORD>



#####################
# webapp properties #
#####################

# Web application deployment properties

# location of tomcat server and path of webapp - e.g. access http://localhost:8080/malariamine
webapp.deploy.url=http://localhost:8080
webapp.path=malariamine

# tomcat username and password needed to deploy webapp
webapp.manager=TOMCAT_USER
webapp.password=<PASSWORD>

# 'Home' link
webapp.baseurl=http://www.flymine.org

# account name for superuser (who can edit appearance and publish templates)
superuser.account=<EMAIL>_user@mail_account
superuser.initialPassword=<PASSWORD>

# run with no associated web site
project.standalone=true

# details for sending login e-mails
mail.host=localhost
mail.from=account@my_mail_host
mail.subject=Welcome to MalariaMine<commit_msg>update base.path as this is used be web services now<commit_after># This file specifies the how to access local postgres databases used for
# building and running and InterMine.bio warehouse.  Also some configuration
# of InterMine behaviour.

#######################
# database properties #
#######################

# if true will log details about execution time of every query
os.production.verboseQueryLog=true

# Access to the postgres database to build into and access from the webapp
db.production.datasource.serverName=localhost
db.production.datasource.databaseName=malariamine
db.production.datasource.user=PSQL_USER
db.production.datasource.password=<PASSWORD>

# Temporary database used during the build process, this is re-built
# as sources are loaded and can be discarded once the warehouse build is complete
# It uses the InterMine 'items' metadata format to describe objects.

# common target items database
db.common-tgt-items.datasource.serverName=localhost
db.common-tgt-items.datasource.databaseName=items-malariamine
db.common-tgt-items.datasource.user=PSQL_USER
db.common-tgt-items.datasource.password=<PASSWORD>


# userprofile database - used by the webapp to store logins, query history,
# saved bags, templates and tags.
db.userprofile-production.datasource.serverName=localhost
db.userprofile-production.datasource.databaseName=userprofile-malariamine
db.userprofile-production.datasource.user=PSQL_USER
db.userprofile-production.datasource.password=<PASSWORD>



#####################
# webapp properties #
#####################

# Web application deployment properties

# location of tomcat server and path of webapp - e.g. access http://localhost:8080/malariamine
webapp.deploy.url=http://localhost:8080
webapp.path=malariamine

# tomcat username and password needed to deploy webapp
webapp.manager=TOMCAT_USER
webapp.password=<PASSWORD>

# 'Home' link
webapp.baseurl=http://localhost:8080

# account name for superuser (who can edit appearance and publish templates)
superuser.account=test_user@mail_account
superuser.initialPassword=<PASSWORD>

# run with no associated web site
project.standalone=true

# details for sending login e-mails
mail.host=localhost
mail.from=account@my_mail_host
mail.subject=Welcome to MalariaMine
{'fraction_non_alphanumeric': 0.11108632612090118, 'fraction_numerical': 0.004461298237787196, 'mean_word_length': 6.1744, 'pattern_counts': {'":': 0, '<': 14, '<?xml version=': 0, '>': 14, 'https://': 0, 'lorem ipsum': 0, 'www.': 1, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '3946671', 'n_tokens_mistral': 1293, 'n_tokens_neox': 1231, 'n_words': 368}