<commit_before>language: python
sudo: false
python:
  - "2.7"
addons:
  apt:
    sources:
    - libgraphviz-dev
cache:
  directories:
    - $TRAVIS_BUILD_DIR/StochKit2.0.11
before_install:
  - wget http://repo.continuum.io/miniconda/Miniconda-latest-Linux-x86_64.sh -O miniconda.sh
  - chmod +x miniconda.sh
  - ./miniconda.sh -b
  - export PATH=/home/travis/miniconda/bin:$PATH
  - conda update --yes conda
install:
  - conda install --yes python=$TRAVIS_PYTHON_VERSION numpy scipy matplotlib sympy networkx nose h5py
  - pip install -i https://pypi.binstar.org/pypi/simple pygraphviz
  - wget http://mmbios.org/index.php/bionetgen-2-2-5-stable/bionetgen-2-2-5-stable-zip?format=raw -O BioNetGen-2.2.5-stable.zip
  - unzip BioNetGen-2.2.5-stable.zip
  - export BNGPATH=`pwd`/BioNetGen-2.2.5-stable
  - if [ ! -d "StochKit2.0.11" ] ; then
      curl --silent -L "http://downloads.sourceforge.net/project/stochkit/StochKit2/StochKit2.0.11/StochKit2.0.11.tgz?r=http%3A%2F%2Fsourceforge.net%2Fprojects%2Fstochkit%2Ffiles%2F&ts=1434079825&use_mirror=iweb" | tar xz;
      StochKit2.0.11/install.sh;
    fi
  - git clone https://github.com/JohnAbel/gillespy.git
  - cd gillespy && STOCHKIT_HOME=$HOME/StochKit2.0.11/ python setup.py install && cd ..
script: nosetests
notifications:
  slack: lopezlab:6RrEQYyVeSjYJKLWTovcqiM1
<commit_msg>Travis: Regenerate and encrypt our slack integration key<commit_after>language: python
sudo: false
python:
- '2.7'
addons:
  apt:
    sources:
    - libgraphviz-dev
cache:
  directories:
  - "$TRAVIS_BUILD_DIR/StochKit2.0.11"
before_install:
- wget http://repo.continuum.io/miniconda/Miniconda-latest-Linux-x86_64.sh -O miniconda.sh
- chmod +x miniconda.sh
- "./miniconda.sh -b"
- export PATH=/home/travis/miniconda/bin:$PATH
- conda update --yes conda
install:
- conda install --yes python=$TRAVIS_PYTHON_VERSION numpy scipy matplotlib sympy networkx
  nose h5py
- pip install -i https://pypi.binstar.org/pypi/simple pygraphviz
- wget http://mmbios.org/index.php/bionetgen-2-2-5-stable/bionetgen-2-2-5-stable-zip?format=raw
  -O BioNetGen-2.2.5-stable.zip
- unzip BioNetGen-2.2.5-stable.zip
- export BNGPATH=`pwd`/BioNetGen-2.2.5-stable
- if [ ! -d "StochKit2.0.11" ] ; then curl --silent -L "http://downloads.sourceforge.net/project/stochkit/StochKit2/StochKit2.0.11/StochKit2.0.11.tgz?r=http%3A%2F%2Fsourceforge.net%2Fprojects%2Fstochkit%2Ffiles%2F&ts=1434079825&use_mirror=iweb"
  | tar xz; StochKit2.0.11/install.sh; fi
- git clone https://github.com/JohnAbel/gillespy.git
- cd gillespy && STOCHKIT_HOME=$HOME/StochKit2.0.11/ python setup.py install && cd
  ..
script: nosetests
notifications:
  slack:
    secure: <KEY>

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{'dir': 'git-commits-cleaned', 'id': '6143720', 'n_tokens_mistral': 1201, 'n_tokens_neox': 1133, 'n_words': 170}