<commit_before>#! /bin/bash

redirectedTemp=tmp
inFiles=$redirectedTemp/inFiles
mkdir -p $redirectedTemp
mkdir -p $inFiles

cd $inFiles

function download {
  url=$1
  
  curl --remote-name --remote-header-name $url
}

#download "https://api.gdc.cancer.gov/data/c6a029e5-0ea3-410d-9e67-360bdfee2914"
#download "https://api.gdc.cancer.gov/data/8b1474b5-0216-4dbc-bc21-e5c6fcb5600f"
#download "https://api.gdc.cancer.gov/data/2849f60b-c211-469a-a1ef-4105bb75d3ec"
#download "https://api.gdc.cancer.gov/data/d9876b23-3e7d-4d7b-bc1b-3b4393cd2afb"

#downloading Clinical Variables
url="https://www.ncbi.nlm.nih.gov/geo/download/?acc=GSE62944&format=file&file=GSE62944%5F06%5F01%5F15%5FTCGA%5F24%5F548%5FClinical%5FVariables%5F9264%5FSamples%2Etxt%2Egz"
fileName=GSE62944_06_01_15_TCGA_24_548_Clinical_Variables_9264_Samples.txt.gz
<commit_msg>fixed download.sh<commit_after>#! /bin/bash

redirectedTemp=tmp
inFiles=$redirectedTemp/inFiles
mkdir -p $redirectedTemp
mkdir -p $inFiles

cd $inFiles

function download {
  url=$1
  
  curl --remote-name --remote-header-name $url
}

download "https://api.gdc.cancer.gov/data/c6a029e5-0ea3-410d-9e67-360bdfee2914"
download "https://api.gdc.cancer.gov/data/8b1474b5-0216-4dbc-bc21-e5c6fcb5600f"
download "https://api.gdc.cancer.gov/data/2849f60b-c211-469a-a1ef-4105bb75d3ec"
download "https://api.gdc.cancer.gov/data/d9876b23-3e7d-4d7b-bc1b-3b4393cd2afb"

#downloading Clinical Variables
url="https://www.ncbi.nlm.nih.gov/geo/download/?acc=GSE62944&format=file&file=GSE62944%5F06%5F01%5F15%5FTCGA%5F24%5F548%5FClinical%5FVariables%5F9264%5FSamples%2Etxt%2Egz"
fileName=GSE62944_06_01_15_TCGA_24_548_Clinical_Variables_9264_Samples.txt.gz

{'fraction_non_alphanumeric': 0.14498806682577567, 'fraction_numerical': 0.15990453460620524, 'mean_word_length': 6.323144104803493, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 10, 'lorem ipsum': 0, 'www.': 2, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 15, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '3109986', 'n_tokens_mistral': 910, 'n_tokens_neox': 769, 'n_words': 65}