<commit_before># encoding: UTF-8

"""Library for reading device settings from FLAME imput file (test.lat)."""

from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals

import re
import os
import logging

from collections import OrderedDict

import flame


from phyutil.phylib.settings import Settings

from phyutil.phylib.lattice.flame import read_lattice

from phyutil.phylib.layout.accel import CavityElement
from phyutil.phylib.layout.accel import SolElement
from phyutil.phylib.layout.accel import BendElement
from phyutil.phylib.layout.accel import HCorElement
from phyutil.phylib.layout.accel import VCorElement
from phyutil.phylib.layout.accel import QuadElement



def build_settings(latpath, start=None, end=None):
    """Convenience method to initialize SettingsFactory and generate settings.

       :param latpath: path to lattice file (test.in)
       :param start: name of accelerator element to start processing
       :param end: name of accelerator element to end processing
    """
    settings_factory = SettingsFactory(latpath)

    if start is None:
        settings_factory.start = start

    if end is None:
        settings_factory.end = end

    return settings_factory.build()


class SettingsFactory(object):
    """SettingsFactory is a factory class to build a settings dictionary from
       a FLAME lattice file (test.lat).

       :param latpath: path to lattice file (test.in)
    """

    def __init__(self, latpath):
        #self.accel = accel
        self.latpath = latpath
        self.start = None
        self.end = None

    @property
    def latpath(self):
        return self._latpath

    @latpath.setter
    def latpath(self, latpath):
        if not isinstance(latpath, basestring):
            raise TypeError("AccelFactory: 'latpath' property much be type string")
        self._latpath = latpath


    @property
    def start(self):
        return self._start

    @start.setter
    def start(self, start):
        if (start != None) and not isinstance(start, basestring):
            raise TypeError("AccelFactory: 'start' property much be type string or None")
        self._start = start


    @property
    def end(self):
        return self._end

    @end.setter
    def end(self, end):
        if (end != None) and not isinstance(end, basestring):
            raise TypeError("AccelFactory: 'end' property much be type string or None")
        self._end = end


    def build(self):
        """Generate the settings dictionary from the FLAME lattice file.
        """
        if not os.path.isfile(self._latpath):
            raise RuntimeError("SettingsFactory: FLAME lattice file not found: {}".format(self._latpath))

        with open(self._latpath, "r") as fp:
            conf = OrderedDict(flame.GLPSParser().parse(fp))

        settings = Settings()

        if 'elements' not in conf:
            return settings

        def parseName(cname):
            # Too FRIB specific!
            parts = re.split("[_:]", cname)
            name = parts[0] + "_" + parts[1] + ":" + parts[2] + "_" + parts[3]
            return name.upper()

        for celem in conf['elements']:
            elem = OrderedDict(celem)
            ftype = elem['type'].lower()

            if ftype in [ 'source', 'drift', 'marker' ]:
                continue

            elif ftype in [ 'bpm', 'stripper' ]:
                name = parseName(elem['name'])
                settings[name] = OrderedDict()

            elif ftype == "rfcavity":
                name = parseName(elem['name'])
                cav = CavityElement(0, 0, 0, name)
                fields = OrderedDict()
                fields[cav.fields.phase] = elem['phi']
                fields[cav.fields.amplitude] = elem['scl_fac']
                fields[cav.fields.frequency] = elem['f']
                settings[name] = fields

            elif ftype == "solenoid":
                name = parseName(elem['name'])
                sol = SolElement(0, 0, 0, name)
                fields = OrderedDict()
                fields[sol.fields.field] = elem['B']
                settings[name] = fields

            elif ftype == "orbtrim":
                name = parseName(elem['name'])
                fields = OrderedDict()
                if 'theta_x' in elem:
                    cor = HCorElement(0, 0, 0, name)
                    fields[cor.fields.angle] = elem['theta_x']
                elif 'theta_y' in elem:
                    cor = VCorElement(0, 0, 0, name)
                    fields[cor.fields.angle] = elem['theta_x']
                else:
                    cor = HCorElement(0, 0, 0, name)
                    fields[cor.fields.angle] = 0.0
                settings[name] = fields

            elif ftype == "sbend":
                name = parseName(elem['name'])
                bend = BendElement(0, 0, 0, name)
                if name not in settings:
                    fields = OrderedDict()
                    fields[bend.fields.field] = elem['bg']
                    fields[bend.fields.angle] = elem['phi']
                    fields[bend.fields.entrAngle] = elem['phi1']
                    fields[bend.fields.exitAngle] = elem['phi2']
                    settings[name] = fields
                else:
                    settings[name][bend.fields.angle] += elem['phi']
                    if elem['phi2'] != 0.0:
                        if settings[name][bend.fields.exitAngle] == 0.0:<commit_msg>fix typo theta_x should be theta_y<commit_after># encoding: UTF-8

"""Library for reading device settings from FLAME imput file (test.lat)."""

from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
from __future__ import unicode_literals

import re
import os
import logging

from collections import OrderedDict

import flame


from phyutil.phylib.settings import Settings

# read_lattice is not implemented
# from phyutil.phylib.lattice.flame import read_lattice

from phyutil.phylib.layout.accel import CavityElement
from phyutil.phylib.layout.accel import SolElement
from phyutil.phylib.layout.accel import BendElement
from phyutil.phylib.layout.accel import HCorElement
from phyutil.phylib.layout.accel import VCorElement
from phyutil.phylib.layout.accel import QuadElement



def build_settings(latpath, start=None, end=None):
    """Convenience method to initialize SettingsFactory and generate settings.

       :param latpath: path to lattice file (test.in)
       :param start: name of accelerator element to start processing
       :param end: name of accelerator element to end processing
    """
    settings_factory = SettingsFactory(latpath)

    if start is None:
        settings_factory.start = start

    if end is None:
        settings_factory.end = end

    return settings_factory.build()


class SettingsFactory(object):
    """SettingsFactory is a factory class to build a settings dictionary from
       a FLAME lattice file (test.lat).

       :param latpath: path to lattice file (test.in)
    """

    def __init__(self, latpath):
        #self.accel = accel
        self.latpath = latpath
        self.start = None
        self.end = None

    @property
    def latpath(self):
        return self._latpath

    @latpath.setter
    def latpath(self, latpath):
        if not isinstance(latpath, basestring):
            raise TypeError("AccelFactory: 'latpath' property much be type string")
        self._latpath = latpath


    @property
    def start(self):
        return self._start

    @start.setter
    def start(self, start):
        if (start != None) and not isinstance(start, basestring):
            raise TypeError("AccelFactory: 'start' property much be type string or None")
        self._start = start


    @property
    def end(self):
        return self._end

    @end.setter
    def end(self, end):
        if (end != None) and not isinstance(end, basestring):
            raise TypeError("AccelFactory: 'end' property much be type string or None")
        self._end = end


    def build(self):
        """Generate the settings dictionary from the FLAME lattice file.
        """
        if not os.path.isfile(self._latpath):
            raise RuntimeError("SettingsFactory: FLAME lattice file not found: {}".format(self._latpath))

        with open(self._latpath, "r") as fp:
            conf = OrderedDict(flame.GLPSParser().parse(fp))

        settings = Settings()

        if 'elements' not in conf:
            return settings

        def parseName(cname):
            # Too FRIB specific!
            parts = re.split("[_:]", cname)
            name = parts[0] + "_" + parts[1] + ":" + parts[2] + "_" + parts[3]
            return name.upper()

        for celem in conf['elements']:
            elem = OrderedDict(celem)
            ftype = elem['type'].lower()

            if ftype in [ 'source', 'drift', 'marker' ]:
                continue

            elif ftype in [ 'bpm', 'stripper' ]:
                name = parseName(elem['name'])
                settings[name] = OrderedDict()

            elif ftype == "rfcavity":
                name = parseName(elem['name'])
                cav = CavityElement(0, 0, 0, name)
                fields = OrderedDict()
                fields[cav.fields.phase] = elem['phi']
                fields[cav.fields.amplitude] = elem['scl_fac']
                fields[cav.fields.frequency] = elem['f']
                settings[name] = fields

            elif ftype == "solenoid":
                name = parseName(elem['name'])
                sol = SolElement(0, 0, 0, name)
                fields = OrderedDict()
                fields[sol.fields.field] = elem['B']
                settings[name] = fields

            elif ftype == "orbtrim":
                name = parseName(elem['name'])
                fields = OrderedDict()
                if 'theta_x' in elem:
                    cor = HCorElement(0, 0, 0, name)
                    fields[cor.fields.angle] = elem['theta_x']
                elif 'theta_y' in elem:
                    cor = VCorElement(0, 0, 0, name)
                    fields[cor.fields.angle] = elem['theta_y']
                else:
                    cor = HCorElement(0, 0, 0, name)
                    fields[cor.fields.angle] = 0.0
                settings[name] = fields

            elif ftype == "sbend":
                name = parseName(elem['name'])
                bend = BendElement(0, 0, 0, name)
                if name not in settings:
                    fields = OrderedDict()
                    fields[bend.fields.field] = elem['bg']
                    fields[bend.fields.angle] = elem['phi']
                    fields[bend.fields.entrAngle] = elem['phi1']
                    fields[bend.fields.exitAngle] = elem['phi2']
                    settings[name] = fields
                else:
                    settings[name][bend.fields.angle] += elem['phi']
                    if elem['phi2'] != 0.0:
                        if settings[name][bend.fields.exitAngle] == 0.0:
{'fraction_non_alphanumeric': 0.10200955213120663, 'fraction_numerical': 0.005767324502117689, 'mean_word_length': 1.9785292538915726, 'pattern_counts': {'":': 10, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '4114714', 'n_tokens_mistral': 3223, 'n_tokens_neox': 2988, 'n_words': 866}