<commit_before>################## BASE IMAGE ######################
FROM biocontainers/biocontainers:v1.0.0_cv4

################## METADATA ######################
LABEL base_image="biocontainers:v1.0.0_cv4"
LABEL version="3"
LABEL software="X!Tandem"
LABEL software.version="10-12-01-1"
LABEL about.summary="software that can match tandem mass spectra with peptide sequences"
LABEL about.home="http://www.thegpm.org/tandem/"
LABEL about.documentation="http://www.thegpm.org/tandem/"
LABEL about.license_file="https://opensource.org/licenses/artistic-license-1.0"
LABEL about.license="SPDX:Artistic-2.0"
LABEL about.tags="Proteomics"
LABEL extra.identifiers.biotools="xtandem"

################## MAINTAINER ######################
MAINTAINER <NAME> <<EMAIL>>

RUN ZIP=tandem-linux-10-12-01-1.zip && \
  wget https://github.com/BioDocker/software-archive/releases/download/X!Tandem/$ZIP -O /tmp/$ZIP && \
  unzip /tmp/$ZIP -d /home/biodocker/bin/ && \
  rm /tmp/$ZIP && \
  bash -c 'echo -e "#!/bin/bash\n/home/biodocker/bin/tandem-linux-10-12-01-1/bin/tandem.exe $@"' > /home/biodocker/bin/tandem && \
  chmod 755 /home/biodocker/bin/tandem<commit_msg>TANDEM:10-12-01: Fixed cmd line missing arg<commit_after>################## BASE IMAGE ######################
FROM biocontainers/biocontainers:v1.0.0_cv4

################## METADATA ######################
LABEL base_image="biocontainers:v1.0.0_cv4"
LABEL version="3"
LABEL software="X!Tandem"
LABEL software.version="10-12-01-1"
LABEL about.summary="software that can match tandem mass spectra with peptide sequences"
LABEL about.home="http://www.thegpm.org/tandem/"
LABEL about.documentation="http://www.thegpm.org/tandem/"
LABEL about.license_file="https://opensource.org/licenses/artistic-license-1.0"
LABEL about.license="SPDX:Artistic-2.0"
LABEL about.tags="Proteomics"
LABEL extra.identifiers.biotools="xtandem"

################## MAINTAINER ######################
MAINTAINER <NAME> <<EMAIL>>

RUN ZIP=tandem-linux-10-12-01-1.zip && \
  wget https://github.com/BioDocker/software-archive/releases/download/X!Tandem/$ZIP -O /tmp/$ZIP && \
  unzip /tmp/$ZIP -d /home/biodocker/bin/ && \
  rm /tmp/$ZIP

RUN bash -c 'echo -e "#!/bin/bash\n/home/biodocker/bin/tandem-linux-10-12-01-1/bin/tandem.exe \$@"' > /home/biodocker/bin/tandem && \
  chmod 755 /home/biodocker/bin/tandem
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{'dir': 'git-commits-cleaned', 'id': '3369650', 'n_tokens_mistral': 918, 'n_tokens_neox': 862, 'n_words': 129}