<commit_before>index.references.BioEntity = synonyms organism crossReferences
index.references.OntologyTerm = synonyms
index.references.Gene = pathways omimDiseases proteins.proteinDomains goAnnotation.ontologyTerm
index.references.Protein = proteinDomains

index.ignore = Comment CrossReference Homologue Interaction Image Location OntologyAnnotation OntologyRelation ProteinStructure Reporter Sequence Synonym

index.facet.single.Category = Category
index.facet.single.Organism = organism.shortName
#index.facet.multi.Pathway = pathways.name

index.boost.Gene = 1.5
index.boost.Protein = 1.2

search.debug = false
<commit_msg>add more to list of classes not to be indexed<commit_after>index.references.BioEntity = synonyms organism crossReferences
index.references.OntologyTerm = synonyms
index.references.Gene = pathways omimDiseases proteins.proteinDomains goAnnotation.ontologyTerm
index.references.Protein = proteinDomains

index.ignore = Comment CrossReference GOAnnotation Homologue Interaction Image Location MicroArrayResult OntologyAnnotation OntologyRelation PhenotypeAnnotation ProteinStructure RNAiScreenHit Reporter Sequence Synonym

index.facet.single.Category = Category
index.facet.single.Organism = organism.shortName
#index.facet.multi.Pathway = pathways.name

index.boost.Gene = 1.5
index.boost.Protein = 1.2

search.debug = false

{'fraction_non_alphanumeric': 0.0650887573964497, 'fraction_numerical': 0.005917159763313609, 'mean_word_length': 6.601123595505618, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '5319765', 'n_tokens_mistral': 403, 'n_tokens_neox': 362, 'n_words': 89}