<commit_before>biosal is a distributed BIOlogical Sequence Analysis Library.

This is a work in progress.

# Technologies

- Name: biosal
- Language: C99 (ISO/IEC 9899:1999)
- Model: actor model
- Technologies: MPI, Pthreads (IEEE Std 1003.1c - 1995)

# Branches

Branch | Browse | HTTPS | SSH
--- | --- | --- | ---
 master | https://github.com/GeneAssembly/biosal/tree/master | https://github.com/GeneAssembly/biosal.git | <EMAIL>:GeneAssembly/biosal.git
 entropy (Fangfang's development branch) | https://github.com/levinas/biosal/tree/entropy | https://github.com/levinas/biosal.git | <EMAIL>:levinas/biosal.git
 energy (Seb's development branch) | https://github.com/sebhtml/biosal/tree/energy | https://github.com/sebhtml/biosal.git | <EMAIL>:sebhtml/biosal.git

# License (see LICENSE.md)

[The BSD 2-Clause License](http://opensource.org/licenses/BSD-2-Clause)

# Tickets

https://github.com/GeneAssembly/biosal/issues?state=open

# Actor model links

- [Why say Actor Model instead of message passing?](http://lambda-the-ultimate.org/node/4683)
- [Actors: a model of concurrent computation in distributed systems](http://dl.acm.org/citation.cfm?id=7929)<commit_msg>document "make run" and "make test" in readme<commit_after>biosal is a distributed BIOlogical Sequence Analysis Library.

This is a work in progress.

# Technologies

- Name: biosal
- Language: C99 (ISO/IEC 9899:1999)
- Model: actor model
- Technologies: MPI, Pthreads (IEEE Std 1003.1c - 1995)

# Try it out

```bash
make test # run tests
make run # run examples
```

# Branches

Branch | Browse | HTTPS | SSH
--- | --- | --- | ---
 master | https://github.com/GeneAssembly/biosal/tree/master | https://github.com/GeneAssembly/biosal.git | <EMAIL>:GeneAssembly/biosal.git
 entropy (Fangfang's development branch) | https://github.com/levinas/biosal/tree/entropy | https://github.com/levinas/biosal.git | <EMAIL>:levinas/biosal.git
 energy (Seb's development branch) | https://github.com/sebhtml/biosal/tree/energy | https://github.com/sebhtml/biosal.git | <EMAIL>:sebhtml/biosal.git

# License (see LICENSE.md)

[The BSD 2-Clause License](http://opensource.org/licenses/BSD-2-Clause)

# Tickets

https://github.com/GeneAssembly/biosal/issues?state=open

# Actor model links

- [Why say Actor Model instead of message passing?](http://lambda-the-ultimate.org/node/4683)
- [Actors: a model of concurrent computation in distributed systems](http://dl.acm.org/citation.cfm?id=7929)
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