<commit_before><tool id="multiqc" name="MultiQC" version="@WRAPPER_VERSION@.1">
    <description>aggregate results from bioinformatics analyses into a single report</description>
    <macros>
        <token name="@WRAPPER_VERSION@">1.5</token>
        <token name="@ESCAPE_IDENTIFIER@">
<![CDATA[
#set identifier = re.sub('[^\s\w\-]', '_', str($file.element_identifier))
        ]]></token>
        <token name="@CHECK_LN_FILE@">
<![CDATA[
grep -q "$pattern" $file || die "'$pattern' not found in the file '$identifier'" &&
ln -s '$file' '$file_path'  &&
        ]]></token>
        <token name="@CREATE_REPEAT_DIR_1@">
<![CDATA[<commit_msg>Add module to error reports<commit_after><tool id="multiqc" name="MultiQC" version="@WRAPPER_VERSION@.1">
    <description>aggregate results from bioinformatics analyses into a single report</description>
    <macros>
        <token name="@WRAPPER_VERSION@">1.5</token>
        <token name="@ESCAPE_IDENTIFIER@">
<![CDATA[
#set identifier = re.sub('[^\s\w\-]', '_', str($file.element_identifier))
        ]]></token>
        <token name="@CHECK_LN_FILE@">
<![CDATA[
grep -q "$pattern" $file || die "Module '${repeat.software_cond.software}: '$pattern' not found in the file '$identifier'" &&
ln -s '$file' '$file_path'  &&
        ]]></token>
        <token name="@CREATE_REPEAT_DIR_1@">
<![CDATA[
{'fraction_non_alphanumeric': 0.19656203288490284, 'fraction_numerical': 0.005979073243647235, 'mean_word_length': 4.292490118577075, 'pattern_counts': {'":': 0, '<': 31, '<?xml version=': 0, '>': 29, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '209118', 'n_tokens_mistral': 475, 'n_tokens_neox': 439, 'n_words': 99}