<commit_before>Suite for annotating TA sites
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Bedtools and Samtools must be in your ``$PATH``<commit_msg>other requirement<commit_after>Suite for annotating TA sites
==============================

Bedtools and Samtools must be in your ``$PATH``

Python requires toolshed:

    pip install toolshed
{'fraction_non_alphanumeric': 0.23404255319148937, 'fraction_numerical': 0.0, 'mean_word_length': 6.857142857142857, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '6657304', 'n_tokens_mistral': 89, 'n_tokens_neox': 76, 'n_words': 32}