<commit_before># dev dependencies
mock                             # mock objects for unit tests
pip                              # make sure the latest version of pip is installed
psutil                           # library for process and system monitoring
responses
sphinx                           # doc generator
#selenium


# kubernetes deployment dependencies
gunicorn==19.7.1                 # web server
Jinja2==2.10.1                    # jinja templates are used in the kubernetes deployment scripts
PyYAML==5.1                     # yaml parsing


# runtime dependencies
asciitree                        # used by print_project_tree django command
beautifulsoup4==4.5.3            # used for html parsing utilites
Django==1.11.23                  # core server-side framework
django-anymail==2.2              # for sending emails using cloud-based mail service providers
django-debug-toolbar             # https://github.com/jazzband/django-debug-toolbar
django-debug-toolbar-request-history  # for debugging database queries on async requests.
django-guardian==1.4.6           # object-level permissions for database records
django-activity-stream==0.6.3    # used to log various user and application actions
django-hijack==2.1.3             # allows admins to login as other user
django-cors-headers==2.2.0       # allows CORS requests for client-side development

elasticsearch==6.2.0             # elasticsearch client
elasticsearch-dsl==6.1.0	     # elasticsearch query utilities

ipython                          # used by shell.py
jmespath==0.9.3
numpy==1.12.1
openpyxl==2.6.4                  # library for reading/writing Excel files
pandas==0.19.2
psycopg2==2.7.5                  # postgres database access
pyliftover==0.3                  # GRCh37/GRCh38 liftover
requests==2.20.0                 # simpler way to make http requests
requests_toolbelt		         # for troubleshooting requests
redis==2.10.6                    # client lib for the redis in-memory database - used for caching server-side objects
tqdm                             # convenient way to create progress bar for long-running command-line operations
whitenoise==3.3.0                # simplified static file handling
xlrd==1.0.0                      # faster library for parsing Excel
xlwt==1.0.0                      # library for writing Excel


# legacy dependencies we're moving away from
django-compressor==2.1.1
django-crispy-forms==1.6.1       # switching to client-side form creation/rendering
django-pretty-times==0.2.0       # date rendering should happen in javascript
#fisher==0.1.5	      	    	 # compute Fisher exact test p-values
Markdown==2.6.8
Pillow==4.0.0                    # required dependency of Djagno ImageField-type database records
progressbar==2.3                 # using tqdm instead
pymongo==3.4.0                   # switching to other database
pysam==0.10.0                    # bam and tabix library
PyVCF==0.6.8
six==1.12.0                      # This is required by gsutil
slacker==0.9.42                  # intend to move this to separate external modules
slugify
<commit_msg>update django-hijack version. Fixes #1088<commit_after># dev dependencies
mock                             # mock objects for unit tests
pip                              # make sure the latest version of pip is installed
psutil                           # library for process and system monitoring
responses
sphinx                           # doc generator
#selenium


# kubernetes deployment dependencies
gunicorn==19.7.1                 # web server
Jinja2==2.10.1                    # jinja templates are used in the kubernetes deployment scripts
PyYAML==5.1                     # yaml parsing


# runtime dependencies
asciitree                        # used by print_project_tree django command
beautifulsoup4==4.5.3            # used for html parsing utilites
Django==1.11.23                  # core server-side framework
django-anymail==2.2              # for sending emails using cloud-based mail service providers
django-debug-toolbar             # https://github.com/jazzband/django-debug-toolbar
django-debug-toolbar-request-history  # for debugging database queries on async requests.
django-guardian==1.4.6           # object-level permissions for database records
django-activity-stream==0.6.3    # used to log various user and application actions
django-hijack==2.1.10             # allows admins to login as other user
django-cors-headers==2.2.0       # allows CORS requests for client-side development

elasticsearch==6.2.0             # elasticsearch client
elasticsearch-dsl==6.1.0	     # elasticsearch query utilities

ipython                          # used by shell.py
jmespath==0.9.3
numpy==1.12.1
openpyxl==2.6.4                  # library for reading/writing Excel files
pandas==0.19.2
psycopg2==2.7.5                  # postgres database access
pyliftover==0.3                  # GRCh37/GRCh38 liftover
requests==2.20.0                 # simpler way to make http requests
requests_toolbelt		         # for troubleshooting requests
redis==2.10.6                    # client lib for the redis in-memory database - used for caching server-side objects
tqdm                             # convenient way to create progress bar for long-running command-line operations
whitenoise==3.3.0                # simplified static file handling
xlrd==1.0.0                      # faster library for parsing Excel
xlwt==1.0.0                      # library for writing Excel


# legacy dependencies we're moving away from
django-compressor==2.1.1
django-crispy-forms==1.6.1       # switching to client-side form creation/rendering
django-pretty-times==0.2.0       # date rendering should happen in javascript
#fisher==0.1.5	      	    	 # compute Fisher exact test p-values
Markdown==2.6.8
Pillow==4.0.0                    # required dependency of Djagno ImageField-type database records
progressbar==2.3                 # using tqdm instead
pymongo==3.4.0                   # switching to other database
pysam==0.10.0                    # bam and tabix library
PyVCF==0.6.8
six==1.12.0                      # This is required by gsutil
slacker==0.9.42                  # intend to move this to separate external modules
slugify

{'fraction_non_alphanumeric': 0.07379542180246518, 'fraction_numerical': 0.03889867136225388, 'mean_word_length': 1.9625414888572783, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 2, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 4, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '5169359', 'n_tokens_mistral': 1742, 'n_tokens_neox': 1634, 'n_words': 526}