<commit_before>## Users - running a container 

1. Set permissions on datastore which will hold results of workflows after they run
        
        mkdir -p datastore
        chmod a+w datastore

2. Run container and login with the following (while persisting workflow run directories to datastore)
 
        docker run --rm -h master -t -v `pwd`/datastore:/mnt/datastore  -i seqware/seqware_full

3. Run the HelloWorld (sample) workflow with 

        seqware bundle launch --dir ~/provisioned-bundles/Workflow_Bundle_HelloWorld_1.0-SNAPSHOT_SeqWare_1.1.0-alpha.6/
        
## Developers - building the image locally 

1. Assuming docker is installed properly, build image with 

        docker build  -t seqware/seqware_full .<commit_msg>seqware_full does not seem to build properly on dockerhub<commit_after>## Users - running a container 

1. Set permissions on datastore which will hold results of workflows after they run
        
        mkdir -p datastore
        chmod a+w datastore

2. Run container and login with the following (while persisting workflow run directories to datastore)
 
        docker run --rm -h master -t -v `pwd`/datastore:/mnt/datastore  -i seqware/seqware_full

3. Run the HelloWorld (sample) workflow with 

        seqware bundle launch --dir ~/provisioned-bundles/Workflow_Bundle_HelloWorld_1.0-SNAPSHOT_SeqWare_1.1.0-alpha.6/
        
## Developers - building the image locally 

1. Assuming docker is installed properly, build image with 

        docker build  -t seqware/seqware_full .

2. This image does not seem to be compatible with the Docker Hub automated build process either due to resource constraints or port blocking. 

        docker push seqware/seqware_full
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{'dir': 'git-commits-cleaned', 'id': '2574445', 'n_tokens_mistral': 523, 'n_tokens_neox': 483, 'n_words': 195}