<commit_before>##### Define db and objectstore resources needed for FlyMine build #####

os.query.max-time=1000000000
os.query.max-limit=20000
os.query.max-offset=100000000
os.queue-len=100

# production database #

os.production.class=org.intermine.objectstore.intermine.ObjectStoreInterMineImpl
os.production.db=db.production
os.production.model=genomic
os.production.truncatedClasses=org.flymine.model.genomic.BioProperty
os.production.logTable=executelog
os.production.minBagTableSize=100

db.production.datasource.class=org.postgresql.jdbc3.Jdbc3PoolingDataSource
db.production.datasource.dataSourceName=db.production
#db.production.datasource.serverName=server_name
#db.production.datasource.databaseName=db_name
#db.production.datasource.user=flymine
#db.production.datasource.password=<PASSWORD>
db.production.datasource.maxConnections=50
db.production.driver=org.postgresql.Driver
db.production.platform=PostgreSQL

osw.production.class=org.intermine.objectstore.intermine.ObjectStoreWriterInterMineImpl
osw.production.os=os.production

integration.production.class=org.intermine.dataloader.IntegrationWriterDataTrackingImpl
integration.production.osw=osw.production
integration.production.datatrackerMaxSize=300000
integration.production.datatrackerCommitSize=10000


##### TARGET ITEMS DATABASES #####

# ensembl anopheles target format items

db.ensembl-anoph-tgt-items.datasource.class=org.postgresql.jdbc3.Jdbc3PoolingDataSource
db.ensembl-anoph-tgt-items.datasource.dataSourceName=db.ensembl-anoph-tgt-items
#db.ensembl-anoph-tgt-items.datasource.serverName=server_name
#db.ensembl-anoph-tgt-items.datasource.databaseName=db_name
#db.ensembl-anoph-tgt-items.datasource.user=user<commit_msg>BioProperty no longer a truncated class<commit_after>##### Define db and objectstore resources needed for FlyMine build #####

os.query.max-time=1000000000
os.query.max-limit=20000
os.query.max-offset=100000000
os.queue-len=100

# production database #

os.production.class=org.intermine.objectstore.intermine.ObjectStoreInterMineImpl
os.production.db=db.production
os.production.model=genomic
#os.production.truncatedClasses=org.flymine.model.genomic.BioProperty
os.production.logTable=executelog
os.production.minBagTableSize=100

db.production.datasource.class=org.postgresql.jdbc3.Jdbc3PoolingDataSource
db.production.datasource.dataSourceName=db.production
#db.production.datasource.serverName=server_name
#db.production.datasource.databaseName=db_name
#db.production.datasource.user=flymine
#db.production.datasource.password=<PASSWORD>
db.production.datasource.maxConnections=50
db.production.driver=org.postgresql.Driver
db.production.platform=PostgreSQL

osw.production.class=org.intermine.objectstore.intermine.ObjectStoreWriterInterMineImpl
osw.production.os=os.production

integration.production.class=org.intermine.dataloader.IntegrationWriterDataTrackingImpl
integration.production.osw=osw.production
integration.production.datatrackerMaxSize=300000
integration.production.datatrackerCommitSize=10000


##### TARGET ITEMS DATABASES #####

# ensembl anopheles target format items

db.ensembl-anoph-tgt-items.datasource.class=org.postgresql.jdbc3.Jdbc3PoolingDataSource
db.ensembl-anoph-tgt-items.datasource.dataSourceName=db.ensembl-anoph-tgt-items
#db.ensembl-anoph-tgt-items.datasource.serverName=server_name
#db.ensembl-anoph-tgt-items.datasource.databaseName=db_name
#db.ensembl-anoph-tgt-items.datasource.user=user
{'fraction_non_alphanumeric': 0.10852487634565028, 'fraction_numerical': 0.027349432644748328, 'mean_word_length': 8.095238095238095, 'pattern_counts': {'":': 0, '<': 5, '<?xml version=': 0, '>': 5, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 4, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '6198330', 'n_tokens_mistral': 1242, 'n_tokens_neox': 1141, 'n_words': 104}