<commit_before>name: STR
channels:
- conda-forge
- bioconda
dependencies:
- python=3*
- BioPython
- PyVCF
- pysam
- pandas
- bedtools
- htslib
- pybedtools
- goleft=0.1.8
- statsmodels
- scikit-learn
- scipy
- numpy
- mosdepth<commit_msg>sort environment.yml by category and add testing modules<commit_after>name: STR
channels:
- conda-forge
- bioconda
dependencies:
# Python
- python=3*
- BioPython
- PyVCF
- pysam
- pandas
- statsmodels
- scikit-learn
- scipy
- numpy
- pybedtools
# only required for development
- pytest
- coverage
# command line tools
- bedtools
- htslib
- goleft=0.1.8
- mosdepth
{'fraction_non_alphanumeric': 0.1064891846921797, 'fraction_numerical': 0.013311148086522463, 'mean_word_length': 3.426470588235294, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '4176964', 'n_tokens_mistral': 236, 'n_tokens_neox': 227, 'n_words': 56}