<commit_before># Template for D. melanogaster scRNA-seq using Illumina prepared samples
---
details:
  - analysis: scRNA-seq
    genome_build: BDGP6
    algorithm:
      cellular_barcode_correction: 1
      cellular_barcodes: [cellular_barcodes.txt, cellular_barcodes_reverse_complement.txt]
      minimum_barcode_depth: 10000
      positional_umi: False
      sample_barcodes: sample_barcodes_reverse_complement.txt
      singlecell_quantifier: rapmap
      transcriptome_fasta: dmel-all-transcript-r6.14.fasta
      umi_type: harvard-indrop-v3<commit_msg>Update dmelanogaster.yaml<commit_after># Template for D. melanogaster scRNA-seq using Illumina prepared samples
---
details:
  - analysis: scRNA-seq
    genome_build: BDGP6
    algorithm:
      # minimum_barcode_depth: 10000
      cellular_barcode_correction: 1
      cellular_barcodes: [cellular_barcodes.txt, cellular_barcodes_reverse_complement.txt]
      minimum_barcode_depth: auto
      sample_barcodes: sample_barcodes_reverse_complement.txt
      singlecell_quantifier: rapmap
      transcriptome_fasta: dmel-all-transcript-r6.14.fasta
      umi_type: harvard-indrop-v3
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