<commit_before>require 'formula'

class Samtools < Formula
  url 'http://sourceforge.net/projects/samtools/files/samtools/0.1.15/samtools-0.1.15.tar.bz2'
  homepage 'http://samtools.sourceforge.net/'
  md5 'caf1cac191fdabd57a309e36f359c047'

  def install
    system "make"
    system "make razip"

    bin.install %w{samtools razip}
    prefix.install %w{examples misc NEWS}
    lib.install 'libbam.a'
    (include+'bam').install Dir['*.h']
    man1.install 'samtools.1'
  end
end<commit_msg>samtools 0.1.16<commit_after>require 'formula'

class Samtools < Formula
  url 'http://sourceforge.net/projects/samtools/files/samtools/0.1.16/samtools-0.1.16.tar.bz2'
  homepage 'http://samtools.sourceforge.net/'
  md5 'ae26c63a783f95a45ddf8a109c9d9a5d'
  head 'https://samtools.svn.sourceforge.net/svnroot/samtools/trunk/samtools'

  def install
    system "make"
    system "make razip"

    bin.install %w{samtools razip}
    (share+'samtools').install %w{examples misc}
    lib.install 'libbam.a'
    (include+'bam').install Dir['*.h']
    man1.install 'samtools.1'
  end
end
{'fraction_non_alphanumeric': 0.14259086672879775, 'fraction_numerical': 0.05871388630009319, 'mean_word_length': 3.8378378378378377, 'pattern_counts': {'":': 0, '<': 5, '<?xml version=': 0, '>': 3, 'https://': 1, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '5231964', 'n_tokens_mistral': 456, 'n_tokens_neox': 416, 'n_words': 67}