<commit_before><project name="interpro" default="default" basedir=".">
    <description>build, test, package interpro</description>

    <import file="../../../imbuild/source.xml"/>

    <property name="interpro.src.alias.token" value="##INTERPRO_SRC_ALIAS##"/>
    <property name="interpro.organism.taxid.list.token" value="##ORGANISM_TAXID_LIST##"/>

    <target name="-pre-retrieve">

        <delete dir="${build.dir}/sql"/>
        <mkdir dir="${build.dir}/sql"/>

        <copy file="${interpro.summary.sql.file}" tofile="${build.dir}/sql/buildInterproSummaryFromInterpro12.sql"/>

        <replace file="${build.dir}/sql/buildInterproSummaryFromInterpro12.sql" token="${interpro.src.alias.token}" value="${interpro.src.alias}"/>
        <replace file="${build.dir}/sql/buildInterproSummaryFromInterpro12.sql" token="${interpro.organism.taxid.list.token}" value="${interpro.organism.taxid.list}"/>

        <sql
            classpathref="task.class.path"
            driver="org.postgresql.Driver"
            url="jdbc:postgresql://gollum:5432/interpro"
            userid="flymine"
            password="<PASSWORD>"
            src="${build.dir}/sql/buildInterproSummaryFromInterpro12.sql"
        />

    </target>

</project>

<commit_msg>Don't do -pre-retrieve when building interpro as buildInterproSummaryFromInterpro12.sql has gone missing.<commit_after><project name="interpro" default="default" basedir=".">
    <description>build, test, package interpro</description>

    <import file="../../../imbuild/source.xml"/>

    <property name="interpro.src.alias.token" value="##INTERPRO_SRC_ALIAS##"/>
    <property name="interpro.organism.taxid.list.token" value="##ORGANISM_TAXID_LIST##"/>

<!--
    <target name="-pre-retrieve">

        <delete dir="${build.dir}/sql"/>
        <mkdir dir="${build.dir}/sql"/>

        <copy file="${interpro.summary.sql.file}" tofile="${build.dir}/sql/buildInterproSummaryFromInterpro12.sql"/>

        <replace file="${build.dir}/sql/buildInterproSummaryFromInterpro12.sql" token="${interpro.src.alias.token}" value="${interpro.src.alias}"/>
        <replace file="${build.dir}/sql/buildInterproSummaryFromInterpro12.sql" token="${interpro.organism.taxid.list.token}" value="${interpro.organism.taxid.list}"/>

        <sql
            classpathref="task.class.path"
            driver="org.postgresql.Driver"
            url="jdbc:postgresql://gollum:5432/interpro"
            userid="flymine"
            password="<PASSWORD>"
            src="${build.dir}/sql/buildInterproSummaryFromInterpro12.sql"
        />

    </target>
-->

</project>


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