<commit_before># Galaxy FR tools
List of tools included in the Galaxy Freiburg instance


### Actiavte Conda environment with ephemeris
```
export PATH=/usr/local/tools/_conda/bin/:$PATH
source activate ephemeris
```

### Install/Update all tools specified in tools.yaml
```bash
shed-install -t tools.yaml -a $GALAXY_API_KEY
```

### Install a single tool
```bash
shed-install --name prokka --owner crs4 --section_label 'Annotation' -a $GALAXY_API_KEY --galaxy http://galaxy.uni-freiburg.de 
```
<commit_msg>enhance readem<commit_after># Galaxy FR tools
List of tools included in the Galaxy Freiburg instance


### Actiavte Conda environment with ephemeris
```
export PATH=/usr/local/tools/_conda/bin/:$PATH
source activate ephemeris
```

### Install/Update all tools specified in tools.yaml
```bash
shed-install -t tools.yaml -a $GALAXY_API_KEY -g galaxy.uni-freiburg.de
```

### Install a single tool
```bash
shed-install --name prokka --owner crs4 --section_label 'Annotation' -a $GALAXY_API_KEY --galaxy http://galaxy.uni-freiburg.de -g galaxy.uni-freiburg.de
```

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