<commit_before>about:
    home: 'http://bowtie-bio.sourceforge.net/bowtie2/index.shtml'
    license: GPLv3
    summary: Fast and sensitive read alignment

package:
    name: bowtie2
    version: 2.2.8

build:
  number: 0

source:
  fn: bowtie2-2.2.8-source.zip # [linux]
  url: http://downloads.sourceforge.net/project/bowtie-bio/bowtie2/2.2.8/bowtie2-2.2.8-source.zip # [linux]
  md5: c3d5dd807f053b9fd7cc786312e6e3fb # [linux]
  fn: bowtie2-2.2.8-macos-x86_64.zip # [osx]
  url: http://downloads.sourceforge.net/project/bowtie-bio/bowtie2/2.2.8/bowtie2-2.2.8-macos-x86_64.zip # [osx]

requirements:
    build:
        - python
    run:
        - python
test:
    commands:
        - bowtie2 --version
        - bowtie2-build --help
        - bowtie2-inspect-l --help
        - bowtie2-align-s --help
<commit_msg>add perl as dependency<commit_after>about:
    home: 'http://bowtie-bio.sourceforge.net/bowtie2/index.shtml'
    license: GPLv3
    summary: Fast and sensitive read alignment

package:
    name: bowtie2
    version: 2.2.8

build:
  number: 1

source:
  fn: bowtie2-2.2.8-source.zip # [linux]
  url: http://downloads.sourceforge.net/project/bowtie-bio/bowtie2/2.2.8/bowtie2-2.2.8-source.zip # [linux]
  md5: c3d5dd807f053b9fd7cc786312e6e3fb # [linux]
  fn: bowtie2-2.2.8-macos-x86_64.zip # [osx]
  url: http://downloads.sourceforge.net/project/bowtie-bio/bowtie2/2.2.8/bowtie2-2.2.8-macos-x86_64.zip # [osx]

requirements:
    build:
        - python
    run:
        - python
        - perl-threaded
test:
    commands:
        - bowtie2 --version
        - bowtie2-build --help
        - bowtie2-inspect-l --help
        - bowtie2-align-s --help

{'fraction_non_alphanumeric': 0.1432871763997592, 'fraction_numerical': 0.07465382299819386, 'mean_word_length': 2.4625, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 4, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '2328236', 'n_tokens_mistral': 755, 'n_tokens_neox': 690, 'n_words': 104}