<commit_before>################## BASE IMAGE ######################

FROM clinicalgenomics/mip:latest

################## METADATA ######################

LABEL base_image="clinicalgenomics/mip:latest"
LABEL version="1"
LABEL software="htslib"
LABEL software.version="1.9"
LABEL extra.binaries="bcftools, bgzip, samtools, tabix"

################## MAINTAINER ######################
MAINTAINER Clinical-Genomics/MIP

RUN conda install bcftools=1.9=ha228f0b_4 htslib=1.9=hc238db4_4 samtools=1.9=h8571acd_11

## Clean up after conda
RUN /opt/conda/bin/conda clean -tipsy

WORKDIR /data/<commit_msg>feat(htslib_docker): Updated to htslib 1.10.2, bcftools 1.10.2 and samtools 1.10<commit_after>################## BASE IMAGE ######################

FROM clinicalgenomics/mip:latest

################## METADATA ######################

LABEL base_image="clinicalgenomics/mip:latest"
LABEL version="2"
LABEL software="htslib"
LABEL software.version="1.10"
LABEL extra.binaries="bcftools, bgzip, samtools, tabix"

################## MAINTAINER ######################
MAINTAINER Clinical-Genomics/MIP

RUN conda install bcftools=1.10.2=hd2cd319_0 htslib=1.10.2=h78d89cc_0 samtools=1.10=h9402c20_2

## Clean up after conda
RUN /opt/conda/bin/conda clean -tipsy

WORKDIR /data/
{'fraction_non_alphanumeric': 0.2740916271721959, 'fraction_numerical': 0.053712480252764615, 'mean_word_length': 7.3907284768211925, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '3838649', 'n_tokens_mistral': 480, 'n_tokens_neox': 454, 'n_words': 84}