<commit_before>sevenbridges-python
===================


|Travis| |PyPI version| |Documentation| |Licence|

`CHANGESETS <https://github.com/sbg/sevenbridges-python/blob/develop/CHANGES.md>`__

sevenbridges-python is a `Python <http://www.python.org/>`__ library
that provides an interface for `the Seven Bridges
Platform <https://www.sbgenomics.com/>`__ and `Cancer Genomics
Cloud <http://www.cancergenomicscloud.org/>`__ public APIs. It works
with Python versions 2.6+ and supports Python 3.

The `Seven Bridges Platform <https://www.sbgenomics.com/>`__ is a
cloud-based environment for conducting bioinformatic analyses. It is a
central hub for teams to store, analyze, and jointly interpret their
bioinformatic data. The Platform co-locates analysis pipelines alongside
the largest genomic datasets to optimize processing, allocating storage
and compute resources on demand.

The `The Cancer Genomics Cloud
(CGC) <http://www.cancergenomicscloud.org/>`__, powered by `Seven
Bridges <https://www.sbgenomics.com/>`__, is also a cloud-based
computation environment. It was built as one of three pilot systems
funded by the `National Cancer Institute <http://www.cancer.gov/>`__ to
explore the paradigm of colocalizing massive genomics datasets, like The
`Cancer Genomics Atlas (TCGA) <http://cancergenome.nih.gov/>`__,
alongside secure and scalable computational resources to analyze them.
The CGC makes more than a petabyte of multi-dimensional data available
immediately to authorized researchers. You can add your own data to
analyze alongside TCGA using predefined analytical workflows or your own
tools.

Installation
------------

The easiest way to install sevenbridges-python is using pip. :

::

    $ pip install sevenbridges-python

Get the Code
------------

sevenbridges-python is actively developed on GitHub, where the code is
always available.

The easiest way to obtain the source is to clone the public repository :

::

    $ git clone git://github.com/sbg/sevenbridges-python.git

Once you have a copy of the source, you can embed it in your Python
package, or install it into your site-packages by invoking: :

::

    $ python setup.py install

If you are interested in reviewing this documentation locally, clone
this repository, position yourself in the docs directory and after<commit_msg>Added Cavatica to the platform supported by the library<commit_after>sevenbridges-python
===================


|Travis| |PyPI version| |Documentation| |Licence|

`CHANGESETS <https://github.com/sbg/sevenbridges-python/blob/develop/CHANGES.md>`__

sevenbridges-python is a `Python <http://www.python.org/>`__ library
that provides an interface for `the Seven Bridges
Platform <https://www.sbgenomics.com/>`__ the `Cancer Genomics
Cloud <http://www.cancergenomicscloud.org/>`__ and `Cavatica <http://www.cavatica.org>`__ 
public APIs. It works with Python versions 2.6+ and supports Python 3.

The `Seven Bridges Platform <https://www.sbgenomics.com/>`__ is a
cloud-based environment for conducting bioinformatic analyses. It is a
central hub for teams to store, analyze, and jointly interpret their
bioinformatic data. The Platform co-locates analysis pipelines alongside
the largest genomic datasets to optimize processing, allocating storage
and compute resources on demand.

The `The Cancer Genomics Cloud
(CGC) <http://www.cancergenomicscloud.org/>`__, powered by `Seven
Bridges <https://www.sbgenomics.com/>`__, is also a cloud-based
computation environment. It was built as one of three pilot systems
funded by the `National Cancer Institute <http://www.cancer.gov/>`__ to
explore the paradigm of colocalizing massive genomics datasets, like The
`Cancer Genomics Atlas (TCGA) <http://cancergenome.nih.gov/>`__,
alongside secure and scalable computational resources to analyze them.
The CGC makes more than a petabyte of multi-dimensional data available
immediately to authorized researchers. You can add your own data to
analyze alongside TCGA using predefined analytical workflows or your own
tools.

`Cavatica <http://www.cavatica.org/>`__, powered by `Seven
Bridges <https://www.sbgenomics.com/>`__, is a data analysis and sharing 
platform designed to accelerate discovery in a scalable, cloud-based compute 
environment where data, results, and workflows are shared among the 
world's research community. Cavatica is built in collaboration with the 
Children Hospital of Philadelphia

Installation
------------

The easiest way to install sevenbridges-python is using pip. :

::

    $ pip install sevenbridges-python

Get the Code
------------

sevenbridges-python is actively developed on GitHub, where the code is
always available.

The easiest way to obtain the source is to clone the public repository :

::

    $ git clone git://github.com/sbg/sevenbridges-python.git

Once you have a copy of the source, you can embed it in your Python
package, or install it into your site-packages by invoking: :

::

    $ python setup.py install

If you are interested in reviewing this documentation locally, clone
this repository, position yourself in the docs directory and after
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