<commit_before>mkdir -p $PREFIX/bin/
mkdir -p $PREFIX/FragGeneScan/

make
make clean
make fgs

cp FragGeneScan        $PREFIX/FragGeneScan/
cp run_FragGeneScan.pl $PREFIX/FragGeneScan/
cp -r train/           $PREFIX/FragGeneScan/

ln -s $PREFIX/FragGeneScan/FragGeneScan        $PREFIX/bin/
ln -s $PREFIX/FragGeneScan/run_FragGeneScan.pl $PREFIX/bin/
ln -s $PREFIX/FragGeneScan/train/              $PREFIX/bin/train<commit_msg>copy binaries in bin/ instead of symlinking<commit_after>mkdir -p $PREFIX/bin/
mkdir -p $PREFIX/FragGeneScan/

make
make clean
make fgs

cp FragGeneScan        $PREFIX/bin/
cp run_FragGeneScan.pl $PREFIX/bin/
cp -r train/           $PREFIX/bin/
{'fraction_non_alphanumeric': 0.10432190760059612, 'fraction_numerical': 0.0, 'mean_word_length': 3.0481927710843375, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '2463592', 'n_tokens_mistral': 263, 'n_tokens_neox': 243, 'n_words': 59}