<commit_before>#!/usr/bin/env python3

from setuptools import setup, find_packages, Extension
import os

setup(
    name = 'camoco',
    version = '0.1.8',
    packages = find_packages(),
    scripts = [
        'bin/BootstrapLocality.py',
        'interfaces/CamocoWeb.py'
    ],

    install_requires = [
        'cython>=0.16',    
        'igraph>=0.1.5',
        'matplotlib>=1.4.3',
        'numpy>=1.9.1',
        'pandas>=0.16',
        'scipy>=0.15',
        'termcolor>=1.1.0'
    ],

    package_data = {
        '':['*.cyx']    
    },
    include_package_data=True,

    author = '<NAME>',
    author_email = '<EMAIL>',
    description = 'Library for Co-Analysis of Molecular Componenets.',
    license = "Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License",
    url = 'https://github.com/schae234/camoco'
)
<commit_msg>Add setuptools Extension for pyx files<commit_after>#!/usr/bin/env python3

from setuptools import setup, find_packages, Extension
import os

pccup = Extension(
    'PCCUP',
    sources=['PCCUP.pyx']
)
refgendist = Extension(
    'RefGenDist',
    sources=['RefGenDist.pyx']
)

setup(
    name = 'camoco',
    version = '0.1.8',
    packages = find_packages(),
    scripts = [
        'bin/BootstrapLocality.py',
        'interfaces/CamocoWeb.py'
    ],
    ext_modules = [pccup,refgendist],

    install_requires = [
        'cython>=0.16',    
        'igraph>=0.1.5',
        'matplotlib>=1.4.3',
        'numpy>=1.9.1',
        'pandas>=0.16',
        'scipy>=0.15',
        'termcolor>=1.1.0'
    ],

    package_data = {
        '':['*.cyx']    
    },
    include_package_data=True,

    author = '<NAME>',
    author_email = '<EMAIL>',
    description = 'Library for Co-Analysis of Molecular Componenets.',
    license = "Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License",
    url = 'https://github.com/schae234/camoco'
)

{'fraction_non_alphanumeric': 0.15756630265210608, 'fraction_numerical': 0.031201248049921998, 'mean_word_length': 2.498181818181818, 'pattern_counts': {'":': 0, '<': 7, '<?xml version=': 0, '>': 21, 'https://': 2, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '430261', 'n_tokens_mistral': 705, 'n_tokens_neox': 676, 'n_words': 117}