<commit_before>BIN := ./scripts

species := mouse human

load-contrasts = \
	$(shell Rscript -e 'modules::import("./config_$1", attach = TRUE); cat(sapply(contrasts, function (x) sprintf("%s-vs-%s", x[1], x[2])))')

contrasts/mouse := $(call load-contrasts,mouse)
contrasts/human := $(call load-contrasts,human)

.PHONY: all
all: go te
	@echo >&2 No default rule. Please run \`make rule\`
	exit 1

.PHONY: go
go: data/go-descriptions.tsv $(foreach i,${species},results/gsa/go-$i.rds)

.PHONY: te
te: \
		$(foreach i,${species},results/te-$i-boxplot.pdf) \
		$(foreach i,${species},results/te-$i-adaptation-test-p.tsv) \<commit_msg>Remove unused variables from Makefile<commit_after>BIN := ./scripts

species := mouse human

.PHONY: all
all: go te
	@echo >&2 No default rule. Please run \`make rule\`
	exit 1

.PHONY: go
go: data/go-descriptions.tsv $(foreach i,${species},results/gsa/go-$i.rds)

.PHONY: te
te: \
		$(foreach i,${species},results/te-$i-boxplot.pdf) \
		$(foreach i,${species},results/te-$i-adaptation-test-p.tsv) \
{'fraction_non_alphanumeric': 0.19805825242718447, 'fraction_numerical': 0.006796116504854369, 'mean_word_length': 4.287179487179487, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 5, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '268467', 'n_tokens_mistral': 418, 'n_tokens_neox': 401, 'n_words': 91}