<commit_before># -----------------------------------------------------------------------------
#
# VIVO runtime properties
#
# This file is provided as example.runtime.properties.
#
# Save a copy of this file as runtime.properties in your Vitro home directory, 
# and edit the properties as needed for your installation.
#
# -----------------------------------------------------------------------------


# -----------------------------------------------------------------------------
# BASIC PROPERTIES
# -----------------------------------------------------------------------------

  # 
  # This namespace will be used when generating URIs for objects created in the 
  # editor. In order to serve linked data, the default namespace must be composed 
  # as follows (optional elements in parentheses): 
  #
  # scheme + server_name (+ port) (+ servlet_context) + "/individual/"
  # 
  # For example, Cornell's default namespace is:
  #
  # http://vivo.cornell.edu/individual/
  #
Vitro.defaultNamespace = http://vivo.mydomain.edu/individual/

  #
  # The email address of the root user for the VIVO application. The password 
  # for this user is initially set to "<PASSWORD>", but you will be asked to 
  # change the password the first time you log in. 
  #
rootUser.emailAddress = <EMAIL>

  #
  # The basic parameters for a database connection. Change the end of the 
  # URL to reflect your database name (if it is not "vitrodb"). Change the username 
  # and password to match the authorized database user you created.
  #
VitroConnection.DataSource.url = jdbc:mysql://localhost/vitrodb
VitroConnection.DataSource.username = vitrodbUsername
VitroConnection.DataSource.password = <PASSWORD>

  #
  # Email parameters which VIVO can use to send mail. If these are left empty, 
  # the "Contact Us" form will be disabled and users will not be notified of
  # changes to their accounts.
  #
email.smtpHost = smtp.mydomain.edu
email.replyTo = <EMAIL>

  # 
  # URL of Solr context used in local VIVO search. This will usually consist of:
  #     scheme + server_name + port + vivo_webapp_name + "solr"
  # In the standard installation, the Solr context will be on the same server as VIVO,
  # and in the same Tomcat instance. The path will be the VIVO webapp.name (specified
  # in build.properties) + "solr"
  #   Example:
  #     vitro.local.solr.url = http://localhost:8080/vivosolr
  #
vitro.local.solr.url = http://localhost:8080/vivosolr


# -----------------------------------------------------------------------------
# LINKING USER ACCOUNTS TO PROFILE PAGES
# -----------------------------------------------------------------------------

  #
  # How is a logged-in user associated with a particular Individual? One way is 
  # for the Individual to have a property whose value is the username of the user.
  # This value should be the URI for that property.
  #
selfEditing.idMatchingProperty = http://vivo.mydomain.edu/ns#networkId


# -----------------------------------------------------------------------------
# USING AN EXTERNAL AUTHENTICATION SYSTEM
# -----------------------------------------------------------------------------

  #
  # If an external authentication system like Shibboleth or CUWebAuth is to be
  # used, this property says which HTTP header will contain the user ID from 
  # the authentication system. If such a system is not to be used, leave this 
  # commented out. Consult the installation instructions for more details. 
  #
#externalAuth.netIdHeaderName = remote_userID 


# -----------------------------------------------------------------------------
# TUNING THE DATABASE CONNECTION POOL
# -----------------------------------------------------------------------------

  #
  # The maximum number of active connections in the database connection pool.
  # Increase this value to support a greater number of concurrent page requests.
  #
VitroConnection.DataSource.pool.maxActive = 40

  #
  # The maximum number of database connections that will be allowed
  # to remain idle in the connection pool.  Default is 25%
  # of the maximum number of active connections.
  #
VitroConnection.DataSource.pool.maxIdle = 10


# -----------------------------------------------------------------------------
# USING A DIFFERENT DATABASE
# -----------------------------------------------------------------------------

  #
  # Parameters to change in order to use VIVO with a database other than 
  # MySQL.
  #
VitroConnection.DataSource.dbtype = MySQL
VitroConnection.DataSource.driver = com.mysql.jdbc.Driver
VitroConnection.DataSource.validationQuery = SELECT 1

  # Note: the above parameters allow you to change the relational database that 
  # is used as the back end for Jena SDB. If you want to use a triple store 
  # other than SDB, you will need to edit applicationSetup.n3. See the 
  # installation instructions for more details.


# -----------------------------------------------------------------------------
# ADDING OPENSOCIAL GADGETS TO VIVO
# -----------------------------------------------------------------------------

  #
  # For OpenSocial integration
  # The base URL of the ORNG Shindig server. Usually, this is the same host and port
  # number as VIVO itself, with a context path of "shindigorng".
  #
#OpenSocial.shindigURL = http://localhost:8080/shindigorng 

  #
  # For OpenSocial integration
  # The host name and port number of the service that provides security tokens for VIVO and
  # Shindig to share. For now, the host name must be the actual host, not "localhost" or "127.0.0.1"
  # The port number must be 8777 
  #
#OpenSocial.tokenService = myhost.mydomain.edu:8777

  #
  # For OpenSocial integration
  # The path to the key file that will be used qwhen generating security tokens for VIVO and 
  # shindig to share.
  #
#OpenSocial.tokenKeyFile = /usr/local/vivo/data/shindig/openssl/securitytokenkey.txt

  #
  # For OpenSocial integration
  # Only set sandbox to True for dev/test environments.  Comment out or set to False in production
  #
#OpenSocial.sandbox = True


# -----------------------------------------------------------------------------
# ADDING LANGUAGES TO VIVO<commit_msg>Fix typo (#39)<commit_after># -----------------------------------------------------------------------------
#
# VIVO runtime properties
#
# This file is provided as example.runtime.properties.
#
# Save a copy of this file as runtime.properties in your Vitro home directory, 
# and edit the properties as needed for your installation.
#
# -----------------------------------------------------------------------------


# -----------------------------------------------------------------------------
# BASIC PROPERTIES
# -----------------------------------------------------------------------------

  # 
  # This namespace will be used when generating URIs for objects created in the 
  # editor. In order to serve linked data, the default namespace must be composed 
  # as follows (optional elements in parentheses): 
  #
  # scheme + server_name (+ port) (+ servlet_context) + "/individual/"
  # 
  # For example, Cornell's default namespace is:
  #
  # http://vivo.cornell.edu/individual/
  #
Vitro.defaultNamespace = http://vivo.mydomain.edu/individual/

  #
  # The email address of the root user for the VIVO application. The password 
  # for this user is initially set to "<PASSWORD>", but you will be asked to 
  # change the password the first time you log in. 
  #
rootUser.emailAddress = <EMAIL>

  #
  # The basic parameters for a database connection. Change the end of the 
  # URL to reflect your database name (if it is not "vitrodb"). Change the username 
  # and password to match the authorized database user you created.
  #
VitroConnection.DataSource.url = jdbc:mysql://localhost/vitrodb
VitroConnection.DataSource.username = vitrodbUsername
VitroConnection.DataSource.password = <PASSWORD>

  #
  # Email parameters which VIVO can use to send mail. If these are left empty, 
  # the "Contact Us" form will be disabled and users will not be notified of
  # changes to their accounts.
  #
email.smtpHost = smtp.mydomain.edu
email.replyTo = <EMAIL>

  # 
  # URL of Solr context used in local VIVO search. This will usually consist of:
  #     scheme + server_name + port + vivo_webapp_name + "solr"
  # In the standard installation, the Solr context will be on the same server as VIVO,
  # and in the same Tomcat instance. The path will be the VIVO webapp.name (specified
  # in build.properties) + "solr"
  #   Example:
  #     vitro.local.solr.url = http://localhost:8080/vivosolr
  #
vitro.local.solr.url = http://localhost:8080/vivosolr


# -----------------------------------------------------------------------------
# LINKING USER ACCOUNTS TO PROFILE PAGES
# -----------------------------------------------------------------------------

  #
  # How is a logged-in user associated with a particular Individual? One way is 
  # for the Individual to have a property whose value is the username of the user.
  # This value should be the URI for that property.
  #
selfEditing.idMatchingProperty = http://vivo.mydomain.edu/ns#networkId


# -----------------------------------------------------------------------------
# USING AN EXTERNAL AUTHENTICATION SYSTEM
# -----------------------------------------------------------------------------

  #
  # If an external authentication system like Shibboleth or CUWebAuth is to be
  # used, this property says which HTTP header will contain the user ID from 
  # the authentication system. If such a system is not to be used, leave this 
  # commented out. Consult the installation instructions for more details. 
  #
#externalAuth.netIdHeaderName = remote_userID 


# -----------------------------------------------------------------------------
# TUNING THE DATABASE CONNECTION POOL
# -----------------------------------------------------------------------------

  #
  # The maximum number of active connections in the database connection pool.
  # Increase this value to support a greater number of concurrent page requests.
  #
VitroConnection.DataSource.pool.maxActive = 40

  #
  # The maximum number of database connections that will be allowed
  # to remain idle in the connection pool.  Default is 25%
  # of the maximum number of active connections.
  #
VitroConnection.DataSource.pool.maxIdle = 10


# -----------------------------------------------------------------------------
# USING A DIFFERENT DATABASE
# -----------------------------------------------------------------------------

  #
  # Parameters to change in order to use VIVO with a database other than 
  # MySQL.
  #
VitroConnection.DataSource.dbtype = MySQL
VitroConnection.DataSource.driver = com.mysql.jdbc.Driver
VitroConnection.DataSource.validationQuery = SELECT 1

  # Note: the above parameters allow you to change the relational database that 
  # is used as the back end for Jena SDB. If you want to use a triple store 
  # other than SDB, you will need to edit applicationSetup.n3. See the 
  # installation instructions for more details.


# -----------------------------------------------------------------------------
# ADDING OPENSOCIAL GADGETS TO VIVO
# -----------------------------------------------------------------------------

  #
  # For OpenSocial integration
  # The base URL of the ORNG Shindig server. Usually, this is the same host and port
  # number as VIVO itself, with a context path of "shindigorng".
  #
#OpenSocial.shindigURL = http://localhost:8080/shindigorng 

  #
  # For OpenSocial integration
  # The host name and port number of the service that provides security tokens for VIVO and
  # Shindig to share. For now, the host name must be the actual host, not "localhost" or "127.0.0.1"
  # The port number must be 8777 
  #
#OpenSocial.tokenService = myhost.mydomain.edu:8777

  #
  # For OpenSocial integration
  # The path to the key file that will be used when generating security tokens for VIVO and 
  # shindig to share.
  #
#OpenSocial.tokenKeyFile = /usr/local/vivo/data/shindig/openssl/securitytokenkey.txt

  #
  # For OpenSocial integration
  # Only set sandbox to True for dev/test environments.  Comment out or set to False in production
  #
#OpenSocial.sandbox = True


# -----------------------------------------------------------------------------
# ADDING LANGUAGES TO VIVO
{'fraction_non_alphanumeric': 0.2426327720207254, 'fraction_numerical': 0.005667098445595855, 'mean_word_length': 1.7143484948362997, 'pattern_counts': {'":': 0, '<': 11, '<?xml version=': 0, '>': 11, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 2, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '413871', 'n_tokens_mistral': 3177, 'n_tokens_neox': 2927, 'n_words': 1223}