<commit_before>VERSION	  = v0.3
#ROOTFLAGS = -pthread -m64
ROOTFLAGS = -m64 -O3
LIBS      = -lz
ROOTLIBS  = -L$(ROOTSYS)/lib -lCore -lCint -lRIO -lNet -lHist -lGraf -lGraf3d \
		-lGpad -lTree -lRint -lMatrix -lPhysics \
		-lMathCore -lThread -lGui

SRC    = src
BINDIR = bin
CXX    = g++ $(ROOTFLAGS) -DCNVNATOR_VERSION=\"$(VERSION)\"
SAMDIR = $(SRC)/samtools
INC    = -I$(ROOTSYS)/include -I$(SAMDIR)
SAMLIB = $(SAMDIR)/libbam.a

OBJDIR = $(SRC)/obj
OBJS   = $(OBJDIR)/cnvnator.o  \
	 $(OBJDIR)/HisMaker.o  \
	 $(OBJDIR)/AliParser.o \
	 $(OBJDIR)/Genotyper.o \
	 $(OBJDIR)/Interval.o  \
	 $(OBJDIR)/Genome.o \<commit_msg>Update Makefile<commit_after>VERSION	  = v0.3
#ROOTFLAGS = -pthread -m64
ROOTFLAGS = -m64 -O3
LIBS      = -lz -pthread
ROOTLIBS  = -L$(ROOTSYS)/lib -lCore -lCint -lRIO -lNet -lHist -lGraf -lGraf3d \
		-lGpad -lTree -lRint -lMatrix -lPhysics \
		-lMathCore -lThread -lGui

SRC    = src
BINDIR = bin
CXX    = g++ $(ROOTFLAGS) -DCNVNATOR_VERSION=\"$(VERSION)\"
SAMDIR = $(SRC)/samtools
INC    = -I$(ROOTSYS)/include -I$(SAMDIR)
SAMLIB = $(SAMDIR)/libbam.a

OBJDIR = $(SRC)/obj
OBJS   = $(OBJDIR)/cnvnator.o  \
	 $(OBJDIR)/HisMaker.o  \
	 $(OBJDIR)/AliParser.o \
	 $(OBJDIR)/Genotyper.o \
	 $(OBJDIR)/Interval.o  \
	 $(OBJDIR)/Genome.o \
{'fraction_non_alphanumeric': 0.18725099601593626, 'fraction_numerical': 0.012749003984063745, 'mean_word_length': 2.8292682926829267, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '2843729', 'n_tokens_mistral': 592, 'n_tokens_neox': 546, 'n_words': 104}