<commit_before>package Bio::EnsEMBL::Analysis::RunnableDB::FindSplitGenes;  

use strict;
use Bio::SeqIO;
use Bio::EnsEMBL::Utils::Exception qw(throw warning);
use Bio::EnsEMBL::Analysis::RunnableDB;
use Bio::EnsEMBL::Gene;  

use Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils::GeneUtils 
 qw(get_transcript_with_longest_CDS get_one2one_orth_for_gene_in_other_species  ) ;  
use Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils; 
#use Bio::EnsEMBL::Analysis::Tools::Utilities; 

use Bio::EnsEMBL::Analysis::Config::GeneBuild::OrthologueEvaluator; 
use Bio::EnsEMBL::Analysis::Config::GeneBuild::Databases; 
use Bio::EnsEMBL::Analysis::Config::Exonerate2Genes;   

use Bio::EnsEMBL::Registry; 
use Bio::EnsEMBL::Pipeline::DBSQL::DBAdaptor; 
use Bio::EnsEMBL::Pipeline::DBSQL::RuleAdaptor;
use Bio::EnsEMBL::Pipeline::Rule;  

use vars qw(@ISA);  

use Bio::EnsEMBL::Analysis::RunnableDB::OrthologueEvaluator; 

@ISA = qw ( Bio::EnsEMBL::Analysis::RunnableDB::OrthologueEvaluator ) ; 
<commit_msg>some unuseful use statements removed<commit_after>package Bio::EnsEMBL::Analysis::RunnableDB::FindSplitGenes;  

use strict;
use Bio::SeqIO;
use Bio::EnsEMBL::Utils::Exception qw(throw warning);
use Bio::EnsEMBL::Analysis::RunnableDB;
use Bio::EnsEMBL::Gene;  
use Bio::EnsEMBL::Analysis::Tools::GeneBuildUtils; 
#use Bio::EnsEMBL::Analysis::Tools::Utilities; 

use Bio::EnsEMBL::Analysis::Config::GeneBuild::OrthologueEvaluator; 
use Bio::EnsEMBL::Analysis::Config::GeneBuild::Databases; 
use Bio::EnsEMBL::Analysis::Config::Exonerate2Genes;   

use Bio::EnsEMBL::Registry; 
use Bio::EnsEMBL::Pipeline::DBSQL::DBAdaptor; 
use Bio::EnsEMBL::Pipeline::DBSQL::RuleAdaptor;
use Bio::EnsEMBL::Pipeline::Rule;  

use vars qw(@ISA);  

use Bio::EnsEMBL::Analysis::RunnableDB::OrthologueEvaluator; 

@ISA = qw ( Bio::EnsEMBL::Analysis::RunnableDB::OrthologueEvaluator ) ; 

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{'dir': 'git-commits-cleaned', 'id': '2400715', 'n_tokens_mistral': 762, 'n_tokens_neox': 704, 'n_words': 88}