<commit_before>blastplus:
  binaries:
    - makeblastdb
    - blastn
    - tblastn
    - blastp
    - blastx
    - tblastx
    - makembindex
    - psiblast
    - rpsblast
    - blastdbcmd
    - segmasker
    - dustmasker
    - blast_formatter
    - windowmasker
    - blastdb_aliastool
    - deltablast
    - rpstblastn
    - blastdbcheck
  version:
    number: '2.2.29'
    command: 'blastx -version'
  url:
    64bit:
      macosx: ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.29/ncbi-blast-2.2.29+-universal-macosx.tar.gz
      linux: ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.29/ncbi-blast-2.2.29+-x64-linux.tar.gz
snap:
  binaries:
    - snap
  version:
    number: '1.0beta.13'
    command: 'snap'
  url:
    64bit:
      linux: https://github.com/HibberdLab/snap/raw/master/bin/linux/snap.tar.gz
      macosx: https://github.com/HibberdLab/snap/raw/osx_1.0beta.13/bin/macosx/snap.tar.gz
samtools:
  binaries:
    - samtools
    - bcftools
  version:
    number: '0.1.19'
    command: 'samtools'
  url:
    64bit:
      linux: https://github.com/cboursnell/samtools/raw/master/build/linux64.tar.gz
      macosx: https://github.com/cboursnell/samtools/raw/master/build/osx64.tar.gz
bam-read:
  binaries:
   - bam-read
  version:
    number: '0.3.2'
    command: 'bam-read'
  url:
    64bit:
      linux: https://github.com/cboursnell/transrate-bam-read/raw/master/bin/linux/bam-read
      macosx: https://github.com/Blahah/transrate-bam-read/raw/master/bin/macosx/bam-read
  unpack: false
bam-split:
  binaries:
   - bam-split
  version:
    number: '0.1'
    command: 'bam-split'
  url:
    64bit:
      linux: https://github.com/Blahah/transrate-bam-read/raw/master/bin/linux/bam-split
      macosx: https://github.com/Blahah/transrate-bam-read/raw/master/bin/macosx/bam-split
  unpack: false
express:
  binaries:
    - express
  version:
    number: '1.5.1'
    command: 'express --version'
  url:
    64bit:
      linux: http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-linux_x86_64.tgz
      macosx: http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-macosx_x86_64.tgz
<commit_msg>update deps<commit_after>blastplus:
  binaries:
    - makeblastdb
    - blastn
    - tblastn
    - blastp
    - blastx
    - tblastx
    - makembindex
    - psiblast
    - rpsblast
    - blastdbcmd
    - segmasker
    - dustmasker
    - blast_formatter
    - windowmasker
    - blastdb_aliastool
    - deltablast
    - rpstblastn
    - blastdbcheck
  version:
    number: '2.2.29'
    command: 'blastx -version'
  url:
    64bit:
      macosx: ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.29/ncbi-blast-2.2.29+-universal-macosx.tar.gz
      linux: ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.29/ncbi-blast-2.2.29+-x64-linux.tar.gz
snap:
  binaries:
    - snap
  version:
    number: '1.0beta.14'
    command: 'snap'
  url:
    64bit:
      linux: https://github.com/HibberdLab/snap/raw/master/bin/linux/snap.tar.gz
      macosx: https://github.com/HibberdLab/snap/raw/osx_1.0beta.13/bin/macosx/snap.tar.gz
samtools:
  binaries:
    - samtools
    - bcftools
  version:
    number: '0.1.19'
    command: 'samtools'
  url:
    64bit:
      linux: https://github.com/cboursnell/samtools/raw/master/build/linux64.tar.gz
      macosx: https://github.com/cboursnell/samtools/raw/master/build/osx64.tar.gz
bam-read:
  binaries:
   - bam-read
  version:
    number: '0.3.4'
    command: 'bam-read'
  url:
    64bit:
      linux: https://github.com/cboursnell/transrate-bam-read/raw/master/bin/linux/bam-read
      macosx: https://github.com/Blahah/transrate-bam-read/raw/master/bin/macosx/bam-read
  unpack: false
bam-split:
  binaries:
   - bam-split
  version:
    number: '0.1'
    command: 'bam-split'
  url:
    64bit:
      linux: https://github.com/Blahah/transrate-bam-read/raw/master/bin/linux/bam-split
      macosx: https://github.com/Blahah/transrate-bam-read/raw/master/bin/macosx/bam-split
  unpack: false
express:
  binaries:
    - express
  version:
    number: '1.5.1'
    command: 'express --version'
  url:
    64bit:
      linux: http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-linux_x86_64.tgz
      macosx: http://bio.math.berkeley.edu/eXpress/downloads/express-1.5.1/express-1.5.1-macosx_x86_64.tgz

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