<commit_before>{% set version = "0.4.4" %}
{% set github = "https://github.com/hbc/bcbioSingleCell" %}

package:
  name: r-bcbiosinglecell
  version: "{{ version }}"

source:
  url: "{{ github }}/archive/v{{ version }}.tar.gz"
  sha256: 6392c6b1d6109ab6014fc178fe9549115b27c6882605343017660f6254822fba

build:
  number: 0
  noarch: generic
  rpaths:
    - lib/R/lib/
    - lib/

requirements:
  host:
      # Depends:
    - r-base
    - bioconductor-singlecellexperiment >=1.6
    - r-basejump >=0.11.14
      # Imports:
    - bioconductor-biocgenerics >=0.30
    - bioconductor-biocparallel >=1.18
    - bioconductor-iranges >=2.18.2
    - bioconductor-s4vectors >=0.22
    - bioconductor-summarizedexperiment >=1.14
    - r-acidplots >=0.2.14
    - r-bcbiobase >=0.6.10
    - r-bioverbs >=0.2.9
    - r-ggplot2 >=3.2
    - r-ggridges >=0.5
    - r-goalie >=0.3.7
    - r-rlang >=0.4
    - r-stringr >=1.4
      # Suggests:
    - r-knitr >=1.24
    - r-r.utils >=2.9
    - r-rmarkdown >=1.14
    - r-sessioninfo >=1.1
    - r-tidyverse >=1.2
  run:
      # Depends:
    - r-base
    - bioconductor-singlecellexperiment >=1.6
    - r-basejump >=0.11.14
      # Imports:
    - bioconductor-biocgenerics >=0.30
    - bioconductor-biocparallel >=1.18
    - bioconductor-iranges >=2.18.2
    - bioconductor-s4vectors >=0.22
    - bioconductor-summarizedexperiment >=1.14
    - r-acidplots >=0.2.14
    - r-bcbiobase >=0.6.10
    - r-bioverbs >=0.2.9
    - r-ggplot2 >=3.2
    - r-ggridges >=0.5
    - r-goalie >=0.3.7
    - r-rlang >=0.4
    - r-stringr >=1.4
      # Suggests:
    - r-knitr >=1.24
    - r-r.utils >=2.9
    - r-rmarkdown >=1.14
    - r-sessioninfo >=1.1
    - r-tidyverse >=1.2

test:
  commands:
    - $R -e "library('bcbioSingleCell')"

about:
  home: https://bioinformatics.sph.harvard.edu/bcbioSingleCell/
  dev_url: "{{ github }}"
  license: MIT
  license_file: LICENSE
  summary: R package for bcbio single-cell RNA-seq analysis.

extra:
  recipe-maintainers:
    - mjsteinbaugh<commit_msg>Update r-bcbiosinglecell to 0.4.5 (#17520)<commit_after>{% set version = "0.4.5" %}
{% set github = "https://github.com/hbc/bcbioSingleCell" %}

package:
  name: r-bcbiosinglecell
  version: "{{ version }}"

source:
  url: "{{ github }}/archive/v{{ version }}.tar.gz"
  sha256: 69a6b2c8ec8223179a26aa97d615c77b88fc08278daf7f92d33925b6c2f7c552

build:
  number: 0
  noarch: generic
  rpaths:
    - lib/R/lib/
    - lib/

requirements:
  host:
      # Depends:
    - bioconductor-singlecellexperiment >=1.6
    - r-base
    - r-basejump >=0.11.15
      # Imports:
    - bioconductor-biocgenerics >=0.30
    - bioconductor-biocparallel >=1.18
    - bioconductor-iranges >=2.18.2
    - bioconductor-s4vectors >=0.22
    - bioconductor-summarizedexperiment >=1.14
    - r-acidplots >=0.2.16
    - r-bcbiobase >=0.6.10
    - r-bioverbs >=0.2.10
    - r-ggplot2 >=3.2
    - r-ggridges >=0.5
    - r-goalie >=0.3.8
    - r-rlang >=0.4
    - r-stringr >=1.4
      # Suggests:
    - r-knitr >=1.24
    - r-r.utils >=2.9
    - r-rmarkdown >=1.14
    - r-sessioninfo >=1.1
    - r-tidyverse >=1.2
  run:
      # Depends:
    - bioconductor-singlecellexperiment >=1.6
    - r-base
    - r-basejump >=0.11.15
      # Imports:
    - bioconductor-biocgenerics >=0.30
    - bioconductor-biocparallel >=1.18
    - bioconductor-iranges >=2.18.2
    - bioconductor-s4vectors >=0.22
    - bioconductor-summarizedexperiment >=1.14
    - r-acidplots >=0.2.16
    - r-bcbiobase >=0.6.10
    - r-bioverbs >=0.2.10
    - r-ggplot2 >=3.2
    - r-ggridges >=0.5
    - r-goalie >=0.3.8
    - r-rlang >=0.4
    - r-stringr >=1.4
      # Suggests:
    - r-knitr >=1.24
    - r-r.utils >=2.9
    - r-rmarkdown >=1.14
    - r-sessioninfo >=1.1
    - r-tidyverse >=1.2

test:
  commands:
    - $R -e "library('bcbioSingleCell')"

about:
  home: https://bioinformatics.sph.harvard.edu/bcbioSingleCell/
  dev_url: "{{ github }}"
  license: MIT
  license_file: LICENSE
  summary: R package for bcbio single-cell RNA-seq analysis.

extra:
  recipe-maintainers:
    - mjsteinbaugh
{'fraction_non_alphanumeric': 0.16588496667489508, 'fraction_numerical': 0.08664527277215503, 'mean_word_length': 2.175548589341693, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 83, 'https://': 4, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '955922', 'n_tokens_mistral': 1917, 'n_tokens_neox': 1751, 'n_words': 291}