<commit_before>#!/usr/bin/env python
# -*- coding: utf-8 -*-


"""
===========================
Flux Balance Analysis Model
===========================

:Authors:
    <NAME>
    <NAME>
    <NAME>
:Date:
    2011-03-28
:Copyright:
    Copyright(c) 2011 Jacobs University of Bremen. All rights reserved.
:File:
    fba.py
"""


import copy
import itertools
import random
import numpy


class FBAModel(object):
    """
    """<commit_msg>added minimal medium for iAF1260<commit_after>#!/usr/bin/env python
# -*- coding: utf-8 -*-


"""
===========================
Flux Balance Analysis Model
===========================

:Authors:
    <NAME>
    <NAME>
    <NAME>
:Date:
    2011-03-28
:Copyright:
    Copyright(c) 2011 Jacobs University of Bremen. All rights reserved.
:File:
    fba.py
"""


import copy
import itertools
import random
import numpy


iAF1260_minimal = ["ca2_b_Transp",
        "cl_b_Transp",
        "co2_b_Transp",
        "cobalt2_b_Transp",
        "cu2_b_Transp",
        "fe2_b_Transp",
        "fe3_b_Transp",
        "h_b_Transp",
        "h2o_b_Transp",
        "k_b_Transp",
        "mg2_b_Transp",
        "mn2_b_Transp",
        "mobd_b_Transp",
        "na1_b_Transp",
        "nh4_b_Transp",
        "pi_b_Transp",
        "so4_b_Transp",
        "tungs_b_Transp",
        "zn2_b_Transp",
        "cbl1_b_Transp"]


class FBAModel(object):
    """
    """
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{'dir': 'git-commits-cleaned', 'id': '5481615', 'n_tokens_mistral': 545, 'n_tokens_neox': 500, 'n_words': 97}