<commit_before># Pseudo-Images of all Arrays

## Raw Values

![raw values](https://github.com/slowkow/arrayqc/blob/master/figures/rawData-images.jpg)

## Cube-root of Raw Values

Taking the cube-root enhances ability to notice linear trends in color
intensity. It is already clear that the first batch of 30 arrays shows
brighter intensity than the second batch of 30 arrays.

![cuberoot of raw values](https://github.com/slowkow/arrayqc/blob/master/figures/rawData-images-cuberoot.jpg)

## PLM Fit Residuals<commit_msg>describe color in raw values pseudo-image<commit_after># Pseudo-Images of all Arrays

## Raw Values

![raw values](https://github.com/slowkow/arrayqc/blob/master/figures/rawData-images.jpg)

## Cube-root of Raw Values

Taking the cube-root enhances ability to notice linear trends in color
intensity. It is already clear that the first batch of 30 arrays shows
lower intensity (deeper blue) than the second batch of 30 arrays.

![cuberoot of raw values](https://github.com/slowkow/arrayqc/blob/master/figures/rawData-images-cuberoot.jpg)

## PLM Fit Residuals
{'fraction_non_alphanumeric': 0.09545875810936053, 'fraction_numerical': 0.0074142724745134385, 'mean_word_length': 4.775401069518717, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 4, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '5663473', 'n_tokens_mistral': 355, 'n_tokens_neox': 319, 'n_words': 112}