<commit_before># BioEntity is abstract

Gene.key_primaryidentifier=primaryIdentifier
Gene.key_secondaryidentifier=secondaryIdentifier, organism
Gene.key_symbol_org=symbol, organism
Gene.key_ncbiGeneNumber=ncbiGeneNumber
Protein.key_primaryidentifier=primaryIdentifier
Protein.key_primaryacc=primaryAccession
Translation.key_primaryidentifier=primaryIdentifier
Translation.key_symbol_org=symbol, organism
Translation.key_primaryidentifier=primaryIdentifier
CDS.key_primaryidentifier=primaryIdentifier
Chromosome.key_primaryidentifier = primaryIdentifier, organism
ChromosomeBand.key_identifier_chromosome_org=primaryIdentifier, chromosome, organism
Contig.key_primaryidentifier=primaryIdentifier
SuperContig.key_primaryidentifier=primaryIdentifier
Clone.key_primaryidentifier=primaryIdentifier
Transcript.key_primaryidentifier=primaryIdentifier
UTR.key_primaryidentifier=primaryIdentifier
Exon.key_primaryidentifier=primaryIdentifier
Promoter.key_primaryidentifier=primaryIdentifier
CpGIsland.key_primaryidentifier=primaryIdentifier
TFBindingSite.key_primaryidentifier=primaryIdentifier
DefinedRegion.key_primaryidentifier=primaryIdentifier
Intron.key_primaryidentifier=primaryIdentifier

Motif.key_identifier=primaryIdentifier

CrossGenomeMatch.key_identifier=identifier
Scaffold.key_primaryidentifier=primaryIdentifier
TFBSCluster.key_primaryidentifier=primaryIdentifier

Organism.key_taxonid=taxonId

Phenotype.key_identifier=identifier
AnatomyTerm.key_identifier=identifier

LocatedSequenceFeature.key_primaryidentifier=primaryIdentifier

# BioProperty is abstract
Disease.key_omimid=omimId

# Evidence is abstract
GOEvidence.key_code=code

# AnalysisResult does not need keys

InfoSource.key_title = title
Publication.key_paper = title, pages, issue, journal, year
Publication.key_pubmed = pubMedId
DataSet.key_title = title
DataSource.key_name = name


Author.key_name = name

# Analysis is abstract
ComputationalAnalysis.key_algorithm = algorithm

# Relation is abstract
Location.key_all = subject, object, end, start, strand, startIsPartial, endIsPartial
PartialLocation.key_all = subject, object, end, start, subjectEnd, subjectStart, strand, startIsPartial, endIsPartial
RankedRelation.key_all = subject, object, rank
SimpleRelation.key_all = subject, object
DistanceRelation.key_all = subject, object

Synonym.key_synonym = subject, value, type, source


ProteinInteraction.key_interaction = shortName, protein
#ProteinInteractor.key_rpi=role, protein, interaction
#ProteinInteractionTerm.key_name=name
ProteinInteractionExperiment.key_name = name
ProteinInteractionRegion.key_region = location, interaction, protein

ProteinDomain.key_identifier=primaryIdentifier

OntologyTerm.key_identifier=identifier
OntologyTerm.key_name_ontology=name, ontology
OntologyRelation.key=parentTerm, childTerm, type
OntologyTermSynonym.key=name, type

Ontology.key_title=title

# mage

#ReporterLocation.key_all = localX, localY, zoneX, zoneY, design
#MicroArraySlideDesign.key_name = name, version
CDNAClone.key_primaryidentifier = primaryIdentifier
ProbeSet.key_primaryidentifier = primaryIdentifier
#LabeledExtract.key_all = sample, label, materialType

#Vector.key_primaryidentifier=primaryIdentifier

#Reporter
#MicroArrayExperiment
#MicroArrayAssay
#NuclearDNA.key_identifier

Comment.key_comment = text, type, source

BindingSite.key_primaryidentifier = primaryIdentifier
MicroarrayOligo.key_primaryidentifier = primaryIdentifier
TilingPathSpan.key_primaryidentifier = primaryIdentifier
PCRProduct.key_primaryidentifier = primaryIdentifier
Primer.key_primaryidentifier = primaryIdentifier
TransposableElementInsertionSite.key_primaryidentifier = primaryIdentifier
Deletion.key_primaryidentifier = primaryIdentifier
ArtificialDeletion.key_primaryidentifier = primaryIdentifier
SyntenicRegion.key_primaryidentifier = primaryIdentifier

# AnoEST keys
EST.key_primaryidentifier = primaryIdentifier
ESTCluster.key_primaryidentifier = primaryIdentifier
<commit_msg>Fixed modmine genomic keys to match flymine.<commit_after># BioEntity is abstract

Gene.key_primaryidentifier=primaryIdentifier
Gene.key_secondaryidentifier=secondaryIdentifier, organism
Gene.key_symbol_org=symbol, organism
Gene.key_ncbiGeneNumber=ncbiGeneNumber
Gene.key_gleanrsymbol=GLEANRsymbol
Protein.key_primaryidentifier=primaryIdentifier
Protein.key_primaryacc=primaryAccession
Translation.key_primaryidentifier=primaryIdentifier
Translation.key_symbol_org=symbol, organism
Translation.key_secondaryidentifier=secondaryIdentifier
CDS.key_primaryidentifier=primaryIdentifier
Chromosome.key_primaryidentifier = primaryIdentifier, organism
ChromosomeBand.key_identifier_chromosome_org=primaryIdentifier, chromosome, organism
Contig.key_primaryidentifier=primaryIdentifier
SuperContig.key_primaryidentifier=primaryIdentifier
Clone.key_primaryidentifier=primaryIdentifier
Transcript.key_primaryidentifier=primaryIdentifier
Transcript.key_secondaryidentifier=secondaryIdentifier
UTR.key_primaryidentifier=primaryIdentifier
Exon.key_primaryidentifier=primaryIdentifier
Promoter.key_primaryidentifier=primaryIdentifier
CpGIsland.key_primaryidentifier=primaryIdentifier
TFBindingSite.key_primaryidentifier=primaryIdentifier
DefinedRegion.key_primaryidentifier=primaryIdentifier
Intron.key_primaryidentifier=primaryIdentifier

Motif.key_identifier=primaryIdentifier

CrossGenomeMatch.key_identifier=identifier
Scaffold.key_primaryidentifier=primaryIdentifier
TFBSCluster.key_primaryidentifier=primaryIdentifier

Organism.key_taxonid=taxonId

Phenotype.key_identifier=identifier
AnatomyTerm.key_identifier=identifier

LocatedSequenceFeature.key_primaryidentifier=primaryIdentifier

# BioProperty is abstract
Disease.key_omimid=omimId

# Evidence is abstract
GOEvidence.key_code=code

# AnalysisResult does not need keys

InfoSource.key_title = title
Publication.key_paper = title, pages, issue, journal, year
Publication.key_pubmed = pubMedId
DataSet.key_title = title
DataSource.key_name = name


Author.key_name = name

# Analysis is abstract
ComputationalAnalysis.key_algorithm = algorithm

# Relation is abstract
Location.key_all = subject, object, end, start, strand, startIsPartial, endIsPartial
PartialLocation.key_all = subject, object, end, start, subjectEnd, subjectStart, strand, startIsPartial, endIsPartial
RankedRelation.key_all = subject, object, rank
SimpleRelation.key_all = subject, object
DistanceRelation.key_all = subject, object

Synonym.key_synonym = subject, value, type, source


ProteinInteraction.key_interaction = shortName, protein
#ProteinInteractor.key_rpi=role, protein, interaction
#ProteinInteractionTerm.key_name=name
ProteinInteractionExperiment.key_name = name
#ProteinInteractionRegion.key_region = location, interaction, protein

ProteinDomain.key_identifier=primaryIdentifier

OntologyTerm.key_identifier=identifier
OntologyTerm.key_name_ontology=name, ontology
OntologyRelation.key=parentTerm, childTerm, type
OntologyTermSynonym.key=name, type

Ontology.key_title=title

# mage

#ReporterLocation.key_all = localX, localY, zoneX, zoneY, design
#MicroArraySlideDesign.key_name = name, version
CDNAClone.key_primaryidentifier = primaryIdentifier
ProbeSet.key_primaryidentifier = primaryIdentifier
#LabeledExtract.key_all = sample, label, materialType

#Vector.key_primaryidentifier=primaryIdentifier

#Reporter
#MicroArrayExperiment
#MicroArrayAssay
#NuclearDNA.key_identifier

Comment.key_comment = text, type, source

BindingSite.key_primaryidentifier = primaryIdentifier
MicroarrayOligo.key_primaryidentifier = primaryIdentifier
TilingPathSpan.key_primaryidentifier = primaryIdentifier
PCRProduct.key_primaryidentifier = primaryIdentifier
Primer.key_primaryidentifier = primaryIdentifier
TransposableElementInsertionSite.key_primaryidentifier = primaryIdentifier
TransposableElementInsertionSite.key_secondaryidentifier = secondaryIdentifier, organism
Deletion.key_primaryidentifier = primaryIdentifier
ArtificialDeletion.key_secondaryidentifier = secondaryIdentifier
SyntenicRegion.key_primaryidentifier = primaryIdentifier

# AnoEST keys
EST.key_primaryidentifier = primaryIdentifier
ESTCluster.key_primaryidentifier = primaryIdentifier

# BDGP in situ
MRNAExpressionTerm.key_name_type = name, type
Stage.key_name = name
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