<commit_before>{% set name = "artic" %}
{% set version = "1.1.1" %}
{% set sha256 = "8758e49d7e2e7aa202d8c034b096f0eb7cd91d8074345377041c53799925d881" %}

package:
    name: {{ name|lower }}
    version: {{ version|replace("-", "_") }}
source:
  url: https://github.com/artic-network/fieldbioinformatics/archive/{{ version }}.tar.gz
  sha256: {{ sha256 }}

build:
  number: 1
  noarch: python
  script: python -m pip install  --ignore-installed .
  entry_points:
    - artic=artic.pipeline:main
    - align_trim=artic.align_trim:main
    - align_trim_n=artic.align_trim_n:main
    - margin_cons=artic.margin_cons:main
    - margin_cons_medaka=artic.margin_cons_medaka:main
    - vcfextract=artic.vcfextract:main
    - artic_vcf_merge=artic.vcf_merge:main
    - artic_vcf_filter=artic.vcf_filter:main
    - artic_make_depth_mask=artic.make_depth_mask:main
    - artic_fasta_header=artic.fasta_header:main
    - artic_mask=artic.mask:main

requirements:
  host:
    - python >=3
    - pip
  run:
    - python >=3
    - tqdm
    - requests<commit_msg>[ci skip] Merge PR 22489<commit_after>{% set name = "artic" %}
{% set version = "1.1.2" %}
{% set sha256 = "80b3ebb82b5979b3ba92a0f829fce542e950c9dd62ec00be019973e9bc3c36af" %}

package:
    name: {{ name|lower }}
    version: {{ version|replace("-", "_") }}
source:
  url: https://github.com/artic-network/fieldbioinformatics/archive/{{ version }}.tar.gz
  sha256: {{ sha256 }}

build:
  number: 0
  noarch: python
  script: python -m pip install  --ignore-installed .
  entry_points:
    - artic=artic.pipeline:main
    - align_trim=artic.align_trim:main
    - align_trim_n=artic.align_trim_n:main
    - margin_cons=artic.margin_cons:main
    - margin_cons_medaka=artic.margin_cons_medaka:main
    - vcfextract=artic.vcfextract:main
    - artic_vcf_merge=artic.vcf_merge:main
    - artic_vcf_filter=artic.vcf_filter:main
    - artic_make_depth_mask=artic.make_depth_mask:main
    - artic_fasta_header=artic.fasta_header:main
    - artic_mask=artic.mask:main

requirements:
  host:
    - python >=3
    - pip
  run:
    - python >=3
    - tqdm
    - requests
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