<commit_before>#!bin/bash

# This script install the required software!

# Install Homebrew
ruby -e "$(curl -fsSL https://raw.github.com/Homebrew/homebrew/go/install)"
brew tap homebrew/science

# Sequence Analysis
brew install --devel samtools
brew install seqtk
brew install bwa
brew install igv

# wget
brew install wget

# Cask
brew install caskroom/cask/brew-cask

# Atom, Mou
brew cask install atom --appdir=/Applications
brew cask install mou --appdir=/Applications

# ql markdown
brew cask install qlmarkdown

# R + Rstudio
brew install R
brew cask install rstudio --appdir=/Applications<commit_msg>Edited install software<commit_after>#!bin/bash

# This script install the required software!

# Install Homebrew, if you haven't as a part of the lecture
#ruby -e "$(curl -fsSL https://raw.github.com/Homebrew/homebrew/go/install)"
#brew tap homebrew/science

# Cask
#brew install caskroom/cask/brew-cask

# Sequence Analysis
brew install --devel samtools
#brew install seqtk
brew install bwa
brew install igv

# wget
brew install wget

# Atom
brew cask install atom --appdir=/Applications

# ql markdown
brew cask install qlmarkdown

# R + Rstudio
brew install R
brew cask install rstudio --appdir=/Applications
{'fraction_non_alphanumeric': 0.0844954881050041, 'fraction_numerical': 0.0, 'mean_word_length': 4.4708520179372195, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 2, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '1332848', 'n_tokens_mistral': 408, 'n_tokens_neox': 383, 'n_words': 140}