<commit_before>1	\N	schema_type	core
2	\N	schema_version	102
3	\N	patch	patch_68_69_a.sql|schema_version
4	1	species.taxonomy_id	4565
6	1	species.alias	bread wheat
7	1	species.alias	common wheat
8	1	species.alias	wheat
9	1	species.strain	Chinese Spring
10	1	species.scientific_name	Triticum aestivum
11	1	species.production_name	triticum_aestivum
12	1	species.classification	aestivum
13	1	species.classification	Triticum
14	1	species.classification	Triticeae
15	1	species.classification	Pooideae
16	1	species.classification	BEP clade
17	1	species.classification	Poaceae
18	1	species.classification	Poales
19	1	species.classification	commelinids
20	1	species.classification	Liliopsida
21	1	species.classification	Magnoliophyta
22	1	species.classification	Spermatophyta
23	1	species.classification	Euphyllophyta
24	1	species.classification	Tracheophyta
25	1	species.classification	Embryophyta
26	1	species.classification	Streptophytina
27	1	species.classification	Streptophyta
28	1	species.classification	Viridiplantae
29	1	species.classification	Eukaryota
30	1	species.division	EnsemblPlants
31	1	assembly.name	IWGSC2
32	1	assembly.date	2014-11
33	1	assembly.default	IWGSC2
39	1	species.display_name	Triticum aestivum
40	1	species.url	Triticum_aestivum
41	\N	patch	patch_69_70_a.sql|schema_version
42	\N	patch	patch_69_70_b.sql|add_mapping_set_history
43	\N	patch	patch_69_70_c.sql|column_datatype_consistency
44	\N	patch	patch_69_70_d.sql|data_file_id_auto_increment
45	\N	patch	patch_69_70_e.sql|protein_feature_hit_description
167	1	assembly.mapping	chromosome:IWGSC2#scaffold:IWGSC2
50	1	genebuild.start_date	2014-11-IWGSC
51	\N	patch	patch_70_71_a.sql|schema_version
52	\N	patch	patch_70_71_b.sql|mapping_set_index
53	\N	patch	patch_71_72_a.sql|schema_version
54	\N	patch	patch_71_72_b.sql|associated_xref
169	1	assembly.mapping	scaffold:IWGSC2#contig
60	\N	patch	patch_72_73_a.sql|schema_version
66	1	sample.location_text	5D
67	1	sample.location_param	5D:17389805-17402607
69	1	repeat.analysis	dust
70	1	repeat.analysis	repeatmask
189	1	repeat_featurebuild.level	toplevel
106	1	assembly.overlapping_regions	0
78	1	species.alias	Triticum aestivum
81	\N	patch	patch_72_73_b.sql|alt_allele_type
80	1	repeat.analysis	repeatmask_trep
82	\N	patch	patch_72_73_c.sql|add_object_type_marker
83	\N	patch	patch_73_74_a.sql|schema_version
84	\N	patch	patch_73_74_b.sql|remove_dnac
85	\N	patch	patch_73_74_c.sql|remove_unconventional_transcript_association
86	\N	patch	patch_73_74_d.sql|remove_qtl
87	\N	patch	patch_73_74_e.sql|remove_canonical_annotation
88	\N	patch	patch_73_74_f.sql|remove_pair_dna_align
89	\N	patch	patch_73_74_g.sql|add_transcript_idx_tise
170	1	assembly.mapping	scaffold:IWGSP1#contig
91	\N	patch	patch_73_74_h.sql|alt_allele_unique_gene_idx
187	1	genebuild.level	toplevel
94	1	genebuild.initial_release_date	2013-12-MIPS
95	1	genebuild.last_geneset_update	2013-12-MIPS
96	1	genebuild.version	2.2
97	1	provider.name	IWGSC
98	1	provider.url	http://www.wheatgenome.org/
188	1	transcriptbuild.level	toplevel
100	1	genebuild.method	Imported from IWGSC
101	1	sample.transcript_param	Traes_1BS_1172A6B03.1
102	1	sample.transcript_text	Traes_1BS_1172A6B03.1
103	1	sample.gene_param	Traes_1BS_1172A6B03
104	1	sample.gene_text	Traes_1BS_1172A6B03
191	1	xref.timestamp	2014-11-25 21:31:46
108	1	sample.search_text	Calnexin
109	\N	patch	patch_74_75_a.sql|schema_version
110	\N	patch	patch_74_75_b.sql|transcript_source
111	\N	patch	patch_74_75_c.sql|add_genome_statistics
112	\N	patch	patch_74_75_d.sql|default_transcript_source
113	\N	patch	patch_74_75_e.sql|unique_attrib_key
114	\N	patch	patch_74_75_f.sql|longer_code
123	1	ploidy	6
124	\N	patch	patch_75_76_a.sql|schema_version
125	\N	patch	patch_75_76_b.sql|allow_null_karyotype
126	\N	patch	patch_75_76_c.sql|remove_alternative_splicing
127	1	schema.load_started	2014-05-09 10:51:50<commit_msg>The provider.* meta keys are deprecated, but we don't need them anyway<commit_after>1	\N	schema_type	core
2	\N	schema_version	102
3	\N	patch	patch_68_69_a.sql|schema_version
4	1	species.taxonomy_id	4565
6	1	species.alias	bread wheat
7	1	species.alias	common wheat
8	1	species.alias	wheat
9	1	species.strain	Chinese Spring
10	1	species.scientific_name	Triticum aestivum
11	1	species.production_name	triticum_aestivum
12	1	species.classification	aestivum
13	1	species.classification	Triticum
14	1	species.classification	Triticeae
15	1	species.classification	Pooideae
16	1	species.classification	BEP clade
17	1	species.classification	Poaceae
18	1	species.classification	Poales
19	1	species.classification	commelinids
20	1	species.classification	Liliopsida
21	1	species.classification	Magnoliophyta
22	1	species.classification	Spermatophyta
23	1	species.classification	Euphyllophyta
24	1	species.classification	Tracheophyta
25	1	species.classification	Embryophyta
26	1	species.classification	Streptophytina
27	1	species.classification	Streptophyta
28	1	species.classification	Viridiplantae
29	1	species.classification	Eukaryota
30	1	species.division	EnsemblPlants
31	1	assembly.name	IWGSC2
32	1	assembly.date	2014-11
33	1	assembly.default	IWGSC2
39	1	species.display_name	Triticum aestivum
40	1	species.url	Triticum_aestivum
41	\N	patch	patch_69_70_a.sql|schema_version
42	\N	patch	patch_69_70_b.sql|add_mapping_set_history
43	\N	patch	patch_69_70_c.sql|column_datatype_consistency
44	\N	patch	patch_69_70_d.sql|data_file_id_auto_increment
45	\N	patch	patch_69_70_e.sql|protein_feature_hit_description
167	1	assembly.mapping	chromosome:IWGSC2#scaffold:IWGSC2
50	1	genebuild.start_date	2014-11-IWGSC
51	\N	patch	patch_70_71_a.sql|schema_version
52	\N	patch	patch_70_71_b.sql|mapping_set_index
53	\N	patch	patch_71_72_a.sql|schema_version
54	\N	patch	patch_71_72_b.sql|associated_xref
169	1	assembly.mapping	scaffold:IWGSC2#contig
60	\N	patch	patch_72_73_a.sql|schema_version
66	1	sample.location_text	5D
67	1	sample.location_param	5D:17389805-17402607
69	1	repeat.analysis	dust
70	1	repeat.analysis	repeatmask
189	1	repeat_featurebuild.level	toplevel
106	1	assembly.overlapping_regions	0
78	1	species.alias	Triticum aestivum
81	\N	patch	patch_72_73_b.sql|alt_allele_type
80	1	repeat.analysis	repeatmask_trep
82	\N	patch	patch_72_73_c.sql|add_object_type_marker
83	\N	patch	patch_73_74_a.sql|schema_version
84	\N	patch	patch_73_74_b.sql|remove_dnac
85	\N	patch	patch_73_74_c.sql|remove_unconventional_transcript_association
86	\N	patch	patch_73_74_d.sql|remove_qtl
87	\N	patch	patch_73_74_e.sql|remove_canonical_annotation
88	\N	patch	patch_73_74_f.sql|remove_pair_dna_align
89	\N	patch	patch_73_74_g.sql|add_transcript_idx_tise
170	1	assembly.mapping	scaffold:IWGSP1#contig
91	\N	patch	patch_73_74_h.sql|alt_allele_unique_gene_idx
187	1	genebuild.level	toplevel
94	1	genebuild.initial_release_date	2013-12-MIPS
95	1	genebuild.last_geneset_update	2013-12-MIPS
96	1	genebuild.version	2.2
188	1	transcriptbuild.level	toplevel
100	1	genebuild.method	Imported from IWGSC
101	1	sample.transcript_param	Traes_1BS_1172A6B03.1
102	1	sample.transcript_text	Traes_1BS_1172A6B03.1
103	1	sample.gene_param	Traes_1BS_1172A6B03
104	1	sample.gene_text	Traes_1BS_1172A6B03
191	1	xref.timestamp	2014-11-25 21:31:46
108	1	sample.search_text	Calnexin
109	\N	patch	patch_74_75_a.sql|schema_version
110	\N	patch	patch_74_75_b.sql|transcript_source
111	\N	patch	patch_74_75_c.sql|add_genome_statistics
112	\N	patch	patch_74_75_d.sql|default_transcript_source
113	\N	patch	patch_74_75_e.sql|unique_attrib_key
114	\N	patch	patch_74_75_f.sql|longer_code
123	1	ploidy	6
124	\N	patch	patch_75_76_a.sql|schema_version
125	\N	patch	patch_75_76_b.sql|allow_null_karyotype
126	\N	patch	patch_75_76_c.sql|remove_alternative_splicing
127	1	schema.load_started	2014-05-09 10:51:50
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{'dir': 'git-commits-cleaned', 'id': '7056564', 'n_tokens_mistral': 3910, 'n_tokens_neox': 3270, 'n_words': 752}