<commit_before># required for pyNeuroML
-e git+https://github.com/NeuralEnsemble/libNeuroML.git@development 
-e git+https://github.com/purcell/airspeed.git#airspeed 

# pyNeuroML itself
-e git+https://github.com/pgleeson/pyNeuroML.git#egg=PyNeuroML

# required for neuronunit
-e git+http://github.com/neuralensemble/elephant.git#egg=elephant-0.1.1
-e git+http://github.com/neuralensemble/python-neo.git#egg=neo-0.4.0dev
-e git+https://github.com/scidash/sciunit.git#egg=sciunit

# neuronunit itself
-e git+https://github.com/rgerkin/neuronunit.git#egg=neuronunit

-e git+https://github.com/pgleeson/pyelectro.git#egg=pyelectro
-e git+https://github.com/pgleeson/neurotune.git#egg=neurotune
-e git+https://github.com/openworm/PyOpenWorm.git@dd29a935f3095d8a693ff3831070a42159df0597#egg=PyOpenWorm

# installs the channelworm web app
-e channelworm

# runs setup.py<commit_msg>Fix egg urls<commit_after># required for pyNeuroML
-e git+https://github.com/NeuralEnsemble/libNeuroML.git@development#egg=libNeuroML
-e git+https://github.com/purcell/airspeed.git#egg=airspeed 

# pyNeuroML itself
-e git+https://github.com/pgleeson/pyNeuroML.git#egg=PyNeuroML

# required for neuronunit
-e git+http://github.com/neuralensemble/elephant.git#egg=elephant-0.1.1
-e git+http://github.com/neuralensemble/python-neo.git#egg=neo-0.4.0dev
-e git+https://github.com/scidash/sciunit.git#egg=sciunit

# neuronunit itself
-e git+https://github.com/rgerkin/neuronunit.git#egg=neuronunit

-e git+https://github.com/pgleeson/pyelectro.git#egg=pyelectro
-e git+https://github.com/pgleeson/neurotune.git#egg=neurotune
-e git+https://github.com/openworm/PyOpenWorm.git@dd<PASSWORD>#egg=PyOpenWorm

# installs the channelworm web app
-e channelworm

# runs setup.py
{'fraction_non_alphanumeric': 0.14893617021276595, 'fraction_numerical': 0.023576768257619323, 'mean_word_length': 5.590909090909091, 'pattern_counts': {'":': 0, '<': 4, '<?xml version=': 0, '>': 4, 'https://': 16, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '5853480', 'n_tokens_mistral': 756, 'n_tokens_neox': 698, 'n_words': 81}