<commit_before>FROM debian:sid

ARG BUILD_DATE
ARG VCS_REF

ARG ROCKSDB_REPO='https://github.com/facebook/rocksdb.git'
ARG ROCKSDB_VERSION='5.2.1'
ARG ROCKSDB_TAG="rocksdb-${ROCKSDB_VERSION}"

RUN mkdir -p /usr/src/app
WORKDIR /usr/src/app

# Install mccortex
RUN set -x && echo 'deb http://deb.debian.org/debian experimental main' > /etc/apt/sources.list.d/experimental.list
RUN apt-get update
RUN apt-get install -y git liblzma-dev libbz2-dev build-essential zlib1g-dev
# RUN git clone --recursive https://github.com/mcveanlab/mccortex
# WORKDIR /usr/src/app/mccortex
# RUN make all
# WORKDIR /usr/src/app

RUN  apt-get install -y  libgflags-dev libjemalloc-dev libsnappy-dev libtbb-dev libzstd-dev python3.6 python3-pip zlib1g zlib1g-dev wget build-essential liblz4-dev
RUN pip3 install --upgrade pip

## Install rocksdb
RUN git clone $ROCKSDB_REPO<commit_msg>Add curl to help with debugging in k8<commit_after>FROM debian:sid

ARG BUILD_DATE
ARG VCS_REF

ARG ROCKSDB_REPO='https://github.com/facebook/rocksdb.git'
ARG ROCKSDB_VERSION='5.2.1'
ARG ROCKSDB_TAG="rocksdb-${ROCKSDB_VERSION}"
RUN apt-get update -y
RUN apt-get install curl -y

RUN mkdir -p /usr/src/app
WORKDIR /usr/src/app

# Install mccortex
RUN set -x && echo 'deb http://deb.debian.org/debian experimental main' > /etc/apt/sources.list.d/experimental.list
RUN apt-get update
RUN apt-get install -y git liblzma-dev libbz2-dev build-essential zlib1g-dev
# RUN git clone --recursive https://github.com/mcveanlab/mccortex
# WORKDIR /usr/src/app/mccortex
# RUN make all
# WORKDIR /usr/src/app

RUN  apt-get install -y  libgflags-dev libjemalloc-dev libsnappy-dev libtbb-dev libzstd-dev python3.6 python3-pip zlib1g zlib1g-dev wget build-essential liblz4-dev
RUN pip3 install --upgrade pip

## Install rocksdb
RUN git clone $ROCKSDB_REPO
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