<commit_before>nrefocus reference
==================
.. toctree::
   :maxdepth: 2


.. automodule:: nrefocus

For a quick overview, see :ref:`genindex`.

Refocusing of 1D/2D images
::::::::::::::::::::::::::
.. automodule:: nrefocus._propagate
.. currentmodule:: nrefocus
.. autosummary:: 
    fft_propagate
    refocus
    refocus_stack

Fourier-domain propagation
~~~~~~~~~~~~~~~~~~~~~~~~~~
.. autofunction:: fft_propagate

Refocusing of single images
~~~~~~~~~~~~~~~~~~~~~~~~~~~
.. autofunction:: refocus

Refocusing of image stacks
~~~~~~~~~~~~~~~~~~~~~~~~~~~
.. autofunction:: refocus_stack


Autofocusing of 1D/2D images
::::::::::::::::::::::::::::
.. automodule:: nrefocus._autofocus
.. currentmodule:: nrefocus
.. autosummary:: 
    autofocus
    autofocus_stack

Metrics
~~~~~~~
.. automodule:: nrefocus.metrics
   :members:

.. currentmodule:: nrefocus

Autofocusing of single images
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.. autofunction:: autofocus

Autofocusing of image stacks
~~~~~~~~~~~~~~~~~~~~~~~~~~~~
.. autofunction:: autofocus_stack

<commit_msg>doc update<commit_after>nrefocus reference
==================
.. toctree::
   :maxdepth: 2

.. automodule:: nrefocus

For a quick overview, see :ref:`genindex`.

Fork `nrefocus on GitHub <https://github.com/paulmueller/nrefocus/>`_.

Refocus 1D/2D fields
::::::::::::::::::::
.. automodule:: nrefocus._propagate
.. currentmodule:: nrefocus
.. autosummary:: 
    fft_propagate
    refocus
    refocus_stack

Fourier-domain propagation
~~~~~~~~~~~~~~~~~~~~~~~~~~
.. autofunction:: fft_propagate

Refocus individual fields
~~~~~~~~~~~~~~~~~~~~~~~~~
.. autofunction:: refocus

Refocus field stacks
~~~~~~~~~~~~~~~~~~~~
.. autofunction:: refocus_stack


Autofocus 1D/2D fields
::::::::::::::::::::::
.. automodule:: nrefocus._autofocus
.. currentmodule:: nrefocus
.. autosummary:: 
    autofocus
    autofocus_stack

Metrics
~~~~~~~
.. automodule:: nrefocus.metrics
   :members:

.. currentmodule:: nrefocus

Autofocus single fields
~~~~~~~~~~~~~~~~~~~~~~~
.. autofunction:: autofocus

Autofocus field stacks
~~~~~~~~~~~~~~~~~~~~~~
.. autofunction:: autofocus_stack


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