<commit_before>TO DO FOR V1
=================================================

* discrete samplers (Matt)
  - Gibbs for small outcome sets
  - slice for larger outcome sets
  - what about multinomial with constraints?

* NUTS II (Matt)
  - diagonal mass adaptation during warmup

* remaining doc
  - reference manual (Bob)
  - getting started guide (Bob) 
  - scale jumbo Stan logo in doxygen (Daniel)
  - API doc (Daniel, Bob)
    + stan/io
    + stan/gm
    + stan/math
    + stan/mcmc
    + stan/memory
    + stan/meta
    + stan/model
    + stan/prob
  - add acknowledgements section
    + <NAME>

* distribution engineering (Daniel)
  - eliminate tabs from code
  - tarball
  - basic distro site
  - check cross-platform compilation:
     + goal: make OS={win,linux,mac} CC={clang++,g++} O={0,3}
     + remove useless warnings
       * unused functions, specifically

* speed tests relative to BUGS

<commit_msg>doxygen: removing stan/io from TO-DO<commit_after>TO DO FOR V1
=================================================

* discrete samplers (Matt)
  - Gibbs for small outcome sets
  - slice for larger outcome sets
  - what about multinomial with constraints?

* NUTS II (Matt)
  - diagonal mass adaptation during warmup

* remaining doc
  - reference manual (Bob)
  - getting started guide (Bob) 
  - scale jumbo Stan logo in doxygen (Daniel)
  - API doc (Daniel, Bob)
    + stan/gm
    + stan/math
    + stan/mcmc
    + stan/memory
    + stan/meta
    + stan/model
    + stan/prob
  - add acknowledgements section
    + <NAME>

* distribution engineering (Daniel)
  - eliminate tabs from code
  - tarball
  - basic distro site
  - check cross-platform compilation:
     + goal: make OS={win,linux,mac} CC={clang++,g++} O={0,3}
     + remove useless warnings
       * unused functions, specifically

* speed tests relative to BUGS


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{'dir': 'git-commits-cleaned', 'id': '6231070', 'n_tokens_mistral': 580, 'n_tokens_neox': 555, 'n_words': 187}