<commit_before><?xml version="1.0"?>
<classes>
  <class name="ProteinDomain" extends="BioEntity" is-interface="true">
    <attribute name="name" type="java.lang.String"/>
    <attribute name="shortName" type="java.lang.String"/>
    <attribute name="type" type="java.lang.String"/>
    <attribute name="description" type="java.lang.String"/>
    <collection name="parentFeatures" referenced-type="ProteinDomain"/>
    <collection name="childFeatures" referenced-type="ProteinDomain"/>
    <collection name="contains" referenced-type="ProteinDomain"/>
    <collection name="foundIn" referenced-type="ProteinDomain"/>
    <collection name="publications" referenced-type="Publication"/><commit_msg>remove unneeded XML.  bioentities already have a publications collection<commit_after><?xml version="1.0"?>
<classes>
  <class name="ProteinDomain" extends="BioEntity" is-interface="true">
    <attribute name="name" type="java.lang.String"/>
    <attribute name="shortName" type="java.lang.String"/>
    <attribute name="type" type="java.lang.String"/>
    <attribute name="description" type="java.lang.String"/>
    <collection name="parentFeatures" referenced-type="ProteinDomain"/>
    <collection name="childFeatures" referenced-type="ProteinDomain"/>
    <collection name="contains" referenced-type="ProteinDomain"/>
    <collection name="foundIn" referenced-type="ProteinDomain"/>
{'fraction_non_alphanumeric': 0.165821868211441, 'fraction_numerical': 0.002896451846488052, 'mean_word_length': 6.197916666666667, 'pattern_counts': {'":': 0, '<': 26, '<?xml version=': 2, '>': 26, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 2}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '7238534', 'n_tokens_mistral': 387, 'n_tokens_neox': 365, 'n_words': 72}