<commit_before>Custom Reader APIs
==================

.. automodule:: reader
   
   HDF5 Files
   ==========

   Hi-C Adjacency Files
   --------------------
   .. autoclass:: reader.hdf5_adjacency.adjacency
      :members:
   
   Hi-C Coordinate Files
   ---------------------
   .. autoclass:: reader.hdf5_coord.coord
      :members:<commit_msg>Added the new bigbed and bigwig readers to the RTD docs<commit_after>Custom Reader APIs
==================

.. automodule:: reader
   
   HDF5 Files
   ==========

   Hi-C Adjacency Files
   --------------------
   .. autoclass:: reader.hdf5_adjacency.adjacency
      :members:
   
   Hi-C Coordinate Files
   ---------------------
   .. autoclass:: reader.hdf5_coord.coord
      :members:


   BigBed Files
   ============
   .. autoclass:: reader.bigbed.bigbed
      :members:

   BigWig Files
   ============
{'fraction_non_alphanumeric': 0.2564102564102564, 'fraction_numerical': 0.006993006993006993, 'mean_word_length': 1.8922558922558923, 'pattern_counts': {'":': 0, '<': 3, '<?xml version=': 0, '>': 3, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '2683075', 'n_tokens_mistral': 279, 'n_tokens_neox': 246, 'n_words': 54}