<commit_before>name: orp
channels:
  - bioconda
  - conda-forge
  - defaults
  - r
dependencies:
  - salmon=1.1.0
  - seqtk=1.3
  - trinity=2.8.5
  - spades=3.13.2
  - busco=4.0.0
  - blat=36
  - last=963
  - rcorrector=1.0.3
  - abyss=2.2.3
  - diamond=0.9.29
  - cd-hit=4.6.8
  - bwa=0.7.17
  - pip:
    - biopython
    - cvxopt
    - cython
    - numpy==1.15.4
    - pandas
    - pip
    - scipy==1.2.1
    - bashplotlib
<commit_msg>add pip<commit_after>name: orp
channels:
  - bioconda
  - conda-forge
  - defaults
  - r
dependencies:
  - salmon=1.1.0
  - seqtk=1.3
  - trinity=2.8.5
  - spades=3.13.2
  - busco=4.0.0
  - blat=36
  - last=963
  - rcorrector=1.0.3
  - abyss=2.2.3
  - diamond=0.9.29
  - cd-hit=4.6.8
  - bwa=0.7.17
  - mcl
  - pip:
    - biopython
    - cvxopt
    - cython
    - bashplotlib
    - python-igraph

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