<commit_before>/* 
 * Copyright 2016 <NAME> <<EMAIL>>.
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *      http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package rappsilber.utils;


/**
 *
 * @author <NAME> <<EMAIL>>
 */
public class XiVersion {
    public static final String m_revstring="$Rev: 745 $";
    public static final String m_extension="";
// overlap  
//    public static final int m_major = 1;
//    public static final int m_minor = 2;
//    public static int m_build = -1;
    public static Version version = new Version(1, 6, m_revstring,m_extension);
     
    
    public static final String changes = 
                                "Version 1.6.745\n" +
                                "  * BugFix decoy proteins not assigned a source\n" +
                                "Version 1.6.744\n" +
                                "  * AminoAcidRestrictedImmoniumIons maybe usable\n" +
                                "  * some output try to finish cleaning on CTRL+C\n" +
                                "  * new sub score CCPepFragmentIntensity\n" +
                                "  * BugFix: bugfix RUN_RE and SCAN_RE was ignored for first spectrum\n" +
                                "  * BugFix: PeaklistWriter not closing down correctly\n" +
                                "  * Bugfix: Commandline xi now has a default local set (en)\n" +
                                "  * Bugfix: PeakListWriter did not properly close the output\n" +<commit_msg>Version 1.6.746.dev<commit_after>/* 
 * Copyright 2016 <NAME> <<EMAIL>>.
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *      http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package rappsilber.utils;


/**
 *
 * @author <NAME> <<EMAIL>>
 */
public class XiVersion {
    public static final String m_revstring="$Rev: 746 $";
    public static final String m_extension="dev";
// overlap  
//    public static final int m_major = 1;
//    public static final int m_minor = 2;
//    public static int m_build = -1;
    public static Version version = new Version(1, 6, m_revstring,m_extension);
     
    
    public static final String changes = 
                                "Version 1.6.746\n" +
                                "  * Bugfix for NoDigestion throwing an NullPointerException\n" +
                                "  * New peak-list iterator that tries to read all fiels in a folder\n" +
                                "  * Use a wrapper for FileInputStream (RobustFileInputStream)  that tries to reopen the underlying file on Errors\n" +
                                "  * ZipStreamIterator - a zip-fiel access that uses the RobustFileInputStream to acces the zip-file\n" +
                                "  * Ensure soem buffers are flushed before closing a search-thread\n" +
                                "  * DB: All scores get written out as an array in spectrum_match\n" +
                                "  * DB2Pinpoint no longer supports pinpoint but only skyline\n" +
                                "  * changed to maven project\n" +
                                "  * Several BugFixes to get Open-and Targetd modifications up to speed with recent canges\n" +
                                "Version 1.6.745\n" +
                                "  * BugFix decoy proteins not assigned a source\n" +
                                "Version 1.6.744\n" +
                                "  * AminoAcidRestrictedImmoniumIons maybe usable\n" +
                                "  * some output try to finish cleaning on CTRL+C\n" +
                                "  * new sub score CCPepFragmentIntensity\n" +
                                "  * BugFix: bugfix RUN_RE and SCAN_RE was ignored for first spectrum\n" +
                                "  * BugFix: PeaklistWriter not closing down correctly\n" +
                                "  * Bugfix: Commandline xi now has a default local set (en)\n" +
                                "  * Bugfix: PeakListWriter did not properly close the output\n" +
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