<commit_before><!DOCTYPE html>
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	<title>Aiden Lab - The Center for Genome Architecture - Baylor College of Medicine</title>
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	<link rel="stylesheet" href="https://code.jquery.com/ui/1.12.1/themes/redmond/jquery-ui.css"/>
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	<div id="app-container">
		<!-- Juicebox app will appear here -->
	</div>

	<!--https://github.com/igvteam/juicebox.js/wiki/Getting-Started-->

	<script type="text/javascript">

		$(document).ready(function () {

			var browser,
			reference;

			reference =
			{
				id: "hg19",
				fastaURL: "https://s3.amazonaws.com/igv.broadinstitute.org/genomes/seq/1kg_v37/human_g1k_v37_decoy.fasta",
				cytobandURL: "https://s3.amazonaws.com/igv.broadinstitute.org/genomes/seq/b37/b37_cytoband.txt"
			};

			browser = hic.createBrowser($('#app-container'), { reference: reference });

			browser.loadHicFile({
		         url: "http://hicfiles.s3.amazonaws.com/hiseq/rpe1/DarrowHuntley-2015/del-Xa-combined.hic",    //  url string or File object
		         name: "HIC001"   //  display name for the map.  Optional, defaults to url
		  }
<commit_msg>adding in parenthesis<commit_after><!DOCTYPE html>
<html>
<head>
	<meta charset="UTF-8" />
	<meta http-equiv="X-UA-Compatible" content="IE=edge" />
	<title>Aiden Lab - The Center for Genome Architecture - Baylor College of Medicine</title>
	<meta name="viewport" content="width=device-width, initial-scale=1.0" />
	<meta name="google-site-verification" content="<KEY>" />

	<!-- stylesheets -->
	<!--link rel="icon" type="image/png" href="favicon.ico"-->

	<!-- CSS -->
	<link rel="stylesheet" href="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/css/bootstrap.min.css">
	<link rel="stylesheet" href="//maxcdn.bootstrapcdn.com/font-awesome/4.2.0/css/font-awesome.min.css">
	<link rel="stylesheet" href="https://code.jquery.com/ui/1.12.1/themes/redmond/jquery-ui.css"/>
	<link rel="stylesheet" href="https://igv.org/web/beta/igv-beta.css">
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	<!-- Javascript -->
	<script src="https://cdnjs.cloudflare.com/ajax/libs/underscore.js/1.8.3/underscore-min.js"></script>
	<script src="https://code.jquery.com/jquery-1.12.4.min.js"></script>
	<script src="https://code.jquery.com/ui/1.12.1/jquery-ui.min.js"></script>
	<script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.7/js/bootstrap.min.js"></script>
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	<![endif]-->
	<!--script src="../js/analytics.js"></script-->

</head>





<body id="home">


	<div id="app-container">
		<!-- Juicebox app will appear here -->
	</div>

	<!--https://github.com/igvteam/juicebox.js/wiki/Getting-Started-->

	<script type="text/javascript">

		$(document).ready(function () {

			var browser,
			reference;

			reference =
			{
				id: "hg19",
				fastaURL: "https://s3.amazonaws.com/igv.broadinstitute.org/genomes/seq/1kg_v37/human_g1k_v37_decoy.fasta",
				cytobandURL: "https://s3.amazonaws.com/igv.broadinstitute.org/genomes/seq/b37/b37_cytoband.txt"
			};

			browser = hic.createBrowser($('#app-container'), { reference: reference });

			browser.loadHicFile({
		         url: "http://hicfiles.s3.amazonaws.com/hiseq/rpe1/DarrowHuntley-2015/del-Xa-combined.hic",    //  url string or File object
		         name: "HIC001"   //  display name for the map.  Optional, defaults to url
		  });

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