<commit_before>[metadata]
name = pyAFQ
url = https://yeatmanlab.github.io/pyAFQ
download_url = https://github.com/yeatmanlab/pyAFQ
author = pyAFQ developers
author_email = <EMAIL>
maintainer = <NAME>
maintainer_email = <EMAIL>
classifiers =
    Development Status :: 3 - Alpha
    Environment :: Console
    Intended Audience :: Science/Research
    License :: OSI Approved :: BSD License
    Operating System :: OS Independent
    Programming Language :: Python
    Topic :: Scientific/Engineering

license = BSD License
description = pyAFQ: Automated Fiber Quantification ... in Python
long_description = file:README.md
long_description_content_type = text/markdown
platforms = OS Independent

[options]
setup_requires =
  setuptools_scm
python_requires = >=3.7
install_requires =
    scikit_image>=0.16.0,<0.19.0
    nibabel>=3.0.0,<3.3.0
    dipy>=1.4.0,<1.5.0
    scipy>=1.2.0,<1.7.0
    numpy>=1.18.5,<1.20
    pandas>=1.0.0,<1.3.0
    joblib>=0.16.0,<1.1.0
    dask>=1.1,<=2021.2.0
    palettable>=3.1.0,<3.4.0
    cloudpickle>=1.3.0,<1.7.0
    toolz>=0.9.0,<0.12.0
    boto3>=1.14.18,<=1.17.10
    s3fs>=0.4.0,<0.6.0
    tqdm>=4.0.0,<4.58.0
    python-dateutil>=2.0.0,<2.9.0
    toml==0.10.*
    setuptools_scm[toml]>=3.4.0,<5.1.0
    popylar==0.2.*
    imageio>=2.8.0,<3.0.0
    templateflow==0.6.2
    pybids>=0.9.3, <0.13.0
    funcargparse==0.2.*
    packaging>=19.0.0,<21.0.0
    seaborn==0.11.*
    plotly==4.9.0
    psutil>=5.7.0,<5.9.0
    kaleido==0.0.3.post1
    pip-conflict-checker==0.6.*
    ipython>=7.13.0,<=7.20.0
zip_safe = False
include_package_data = True
packages = find:

[options.extras_require]
dev =
    botocore==1.17.19
    docutils==0.15.2
    sphinx
    pytest==6.0.1
    pytest-cov==2.10.0
    flake8
    sphinx_gallery
    sphinx_rtd_theme
    numpydoc==0.9.2
    sphinx-autoapi
    rapidfuzz
    xvfbwrapper==0.2.9
    moto==1.3.14
    pydata-sphinx-theme
fury =
    vtk==9.0.1
    fury==0.6.0
    xvfbwrapper==0.2.9
fsl = 
    fslpy
itk = 
    h5py
msmt =
    cvxpy>=1.1.10,<1.1.12<commit_msg>BF: Update s3fs version.<commit_after>[metadata]
name = pyAFQ
url = https://yeatmanlab.github.io/pyAFQ
download_url = https://github.com/yeatmanlab/pyAFQ
author = pyAFQ developers
author_email = <EMAIL>
maintainer = <NAME>
maintainer_email = <EMAIL>
classifiers =
    Development Status :: 3 - Alpha
    Environment :: Console
    Intended Audience :: Science/Research
    License :: OSI Approved :: BSD License
    Operating System :: OS Independent
    Programming Language :: Python
    Topic :: Scientific/Engineering

license = BSD License
description = pyAFQ: Automated Fiber Quantification ... in Python
long_description = file:README.md
long_description_content_type = text/markdown
platforms = OS Independent

[options]
setup_requires =
  setuptools_scm
python_requires = >=3.7
install_requires =
    scikit_image>=0.16.0,<0.19.0
    nibabel>=3.0.0,<3.3.0
    dipy>=1.4.0,<1.5.0
    scipy>=1.2.0,<1.7.0
    numpy>=1.18.5,<1.20
    pandas>=1.0.0,<1.3.0
    joblib>=0.16.0,<1.1.0
    dask>=1.1,<=2021.2.0
    palettable>=3.1.0,<3.4.0
    cloudpickle>=1.3.0,<1.7.0
    toolz>=0.9.0,<0.12.0
    boto3>=1.14.18,<=1.17.10
    s3fs>=0.4.0
    tqdm>=4.0.0,<4.58.0
    python-dateutil>=2.0.0,<2.9.0
    toml==0.10.*
    setuptools_scm[toml]>=3.4.0,<5.1.0
    popylar==0.2.*
    imageio>=2.8.0,<3.0.0
    templateflow==0.6.2
    pybids>=0.9.3, <0.13.0
    funcargparse==0.2.*
    packaging>=19.0.0,<21.0.0
    seaborn==0.11.*
    plotly==4.9.0
    psutil>=5.7.0,<5.9.0
    kaleido==0.0.3.post1
    pip-conflict-checker==0.6.*
    ipython>=7.13.0,<=7.20.0
zip_safe = False
include_package_data = True
packages = find:

[options.extras_require]
dev =
    botocore==1.17.19
    docutils==0.15.2
    sphinx
    pytest==6.0.1
    pytest-cov==2.10.0
    flake8
    sphinx_gallery
    sphinx_rtd_theme
    numpydoc==0.9.2
    sphinx-autoapi
    rapidfuzz
    xvfbwrapper==0.2.9
    moto==1.3.14
    pydata-sphinx-theme
fury =
    vtk==9.0.1
    fury==0.6.0
    xvfbwrapper==0.2.9
fsl =
    fslpy
itk =
    h5py
msmt =
    cvxpy>=1.1.10,<1.1.12
{'fraction_non_alphanumeric': 0.1696165191740413, 'fraction_numerical': 0.10521140609636184, 'mean_word_length': 2.7710843373493974, 'pattern_counts': {'":': 0, '<': 52, '<?xml version=': 0, '>': 55, 'https://': 4, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 4, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '1391097', 'n_tokens_mistral': 1930, 'n_tokens_neox': 1855, 'n_words': 252}