<commit_before>#!/usr/bin/env bash

set -ex

docker-compose up -d seqr
docker-compose logs postgres
docker-compose logs elasticsearch
docker-compose logs redis
curl localhost:9200
sleep 30
docker-compose logs seqr
echo -ne 'testpassword\n' docker-compose exec seqr python manage.py createsuperuser --username test --email <EMAIL>
<commit_msg>check elasticsearch connection from inside the seqr container. elasticsearch is no longer visible on the host<commit_after>#!/usr/bin/env bash

set -ex

docker-compose up -d seqr
docker-compose logs postgres
docker-compose logs elasticsearch
docker-compose logs redis
docker-compose exec seqr curl elasticsearch:9200
sleep 30
docker-compose logs seqr
echo -ne 'testpassword\n' docker-compose exec seqr python manage.py createsuperuser --username test --email <EMAIL>

{'fraction_non_alphanumeric': 0.07169344870210136, 'fraction_numerical': 0.014833127317676144, 'mean_word_length': 5.0, 'pattern_counts': {'":': 0, '<': 5, '<?xml version=': 0, '>': 5, 'https://': 0, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '5686158', 'n_tokens_mistral': 269, 'n_tokens_neox': 241, 'n_words': 92}