<commit_before>##Mitomaster
Source code for Mitomaster http://mitomaster.mitomap.org/

####Stuff you would need to install this web app should you be so foolish to try
   * [Mitomaster perl module](https://github.com/leipzig/Bio_Mitomaster)
   * CLI Haplogrep.jar - contact <EMAIL> for this
   * [Twitter Bootstrap](http://getbootstrap.com/)
   * [DataTables](https://github.com/DataTables/DataTables)
   * [TableTools](https://github.com/DataTables/TableTools) 
   * [GenomeTools[(https://github.com/genometools/genometools) - put this along with rCRS.gff3 in a directory "gt/"
   * Create top level temp directories:  uploads/ tmphaplo/ tmpgt/
   * Load mitomap and mitomasterb schemas into postgres database called mito
   * Fill in cgi-bin/LocalSettings.pm using sample file<commit_msg>temps<commit_after>##Mitomaster
Source code for Mitomaster http://mitomaster.mitomap.org/

####Stuff you would need to install this web app should you be so foolish to try
   * [Mitomaster perl module](https://github.com/leipzig/Bio_Mitomaster)
   * CLI Haplogrep.jar - contact <EMAIL> for this
   * [Twitter Bootstrap](http://getbootstrap.com/)
   * [DataTables](https://github.com/DataTables/DataTables)
   * [TableTools](https://github.com/DataTables/TableTools) 
   * [GenomeTools](https://github.com/genometools/genometools) - put in "gt/"
   * Create top level temp directories:  `uploads/` `tmphaplo/` `tmpgt/` `tmp_gff3/`
   * Load mitomap and mitomasterb schemas into postgres database called mito
   * Fill in cgi-bin/Mitoprocess/LocalSettings.pm using sample file
{'fraction_non_alphanumeric': 0.11956521739130435, 'fraction_numerical': 0.0012787723785166241, 'mean_word_length': 4.305084745762712, 'pattern_counts': {'":': 0, '<': 5, '<?xml version=': 0, '>': 5, 'https://': 8, 'lorem ipsum': 0, 'www.': 0, 'xml': 0}, 'pii_count': 0, 'substrings_counts': 0, 'word_list_counts': {'cursed_substrings.json': 0, 'profanity_word_list.json': 0, 'sexual_word_list.json': 0, 'zh_pornsignals.json': 0}}
{'dir': 'git-commits-cleaned', 'id': '6752797', 'n_tokens_mistral': 522, 'n_tokens_neox': 498, 'n_words': 132}