##############################################################################
# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *


class Spades(CMakePackage):
    """SPAdes - St. Petersburg genome assembler - is intended for both
       standard isolates and single-cell MDA bacteria assemblies."""

    homepage = "http://cab.spbu.ru/software/spades/"
    url      = "http://cab.spbu.ru/files/release3.10.1/SPAdes-3.10.1.tar.gz"

    version('3.11.1', '478677b560e2f98db025e8efd5245cdf')
    version('3.10.1', 'dcab7d145af81b59cc867562f27536c3')

    depends_on('python', type=('build', 'run'))
    depends_on('zlib')
    depends_on('bzip2')

    conflicts('%gcc@7.1.0:')

    root_cmakelists_dir = 'src'

##############################################################################
# Copyright (c) 2013-2018, Lawrence Livermore National Security, LLC.
# Produced at the Lawrence Livermore National Laboratory.
#
# This file is part of Spack.
# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
# LLNL-CODE-647188
#
# For details, see https://github.com/spack/spack
# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License (as
# published by the Free Software Foundation) version 2.1, February 1999.
#
# This program is distributed in the hope that it will be useful, but
# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
# conditions of the GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *


class Spades(CMakePackage):
    """SPAdes - St. Petersburg genome assembler - is intended for both
       standard isolates and single-cell MDA bacteria assemblies."""

    homepage = "http://cab.spbu.ru/software/spades/"
    url      = "http://cab.spbu.ru/files/release3.10.1/SPAdes-3.10.1.tar.gz"

    version('3.11.1', '478677b560e2f98db025e8efd5245cdf')
    version('3.10.1', 'dcab7d145af81b59cc867562f27536c3')

    depends_on('python', type=('build', 'run'))
    depends_on('zlib')
    depends_on('bzip2')

    conflicts('%gcc@7.1.0:', when='@:3.10.1')

    root_cmakelists_dir = 'src'

fix build (#7608)