/*
 * Copyright 2006-2012 The MZmine 2 Development Team
 * 
 * This file is part of MZmine 2.
 * 
 * MZmine 2 is free software; you can redistribute it and/or modify it under the
 * terms of the GNU General Public License as published by the Free Software
 * Foundation; either version 2 of the License, or (at your option) any later
 * version.
 * 
 * MZmine 2 is distributed in the hope that it will be useful, but WITHOUT ANY
 * WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
 * A PARTICULAR PURPOSE. See the GNU General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License along with
 * MZmine 2; if not, write to the Free Software Foundation, Inc., 51 Franklin St,
 * Fifth Floor, Boston, MA 02110-1301 USA
 */

package net.sf.mzmine.modules.visualization.peaklist;

import net.sf.mzmine.modules.visualization.peaklist.table.CommonColumnType;
import net.sf.mzmine.modules.visualization.peaklist.table.DataFileColumnType;
import net.sf.mzmine.parameters.Parameter;
import net.sf.mzmine.parameters.impl.SimpleParameterSet;
import net.sf.mzmine.parameters.parametertypes.ComboParameter;
import net.sf.mzmine.parameters.parametertypes.IntegerParameter;
import net.sf.mzmine.parameters.parametertypes.PeakListsParameter;

public class PeakListTableParameters extends SimpleParameterSet {

	public static final PeakListsParameter peakLists = new PeakListsParameter();

	public static final ColumnSettingParameter<CommonColumnType> commonColumns = new ColumnSettingParameter<CommonColumnType>(
			"Common columns", "Visible common columns",
			CommonColumnType.values());

	public static final ColumnSettingParameter<DataFileColumnType> dataFileColumns = new ColumnSettingParameter<DataFileColumnType>(
			"Data file columns", "Visible common columns",
			DataFileColumnType.values());

	public static final IntegerParameter rowHeight = new IntegerParameter(
			"Row height", "Row height", 30);

	public static final ComboParameter<PeakShapeNormalization> peakShapeNormalization = new ComboParameter<PeakShapeNormalization>(
			"Peak shape normalization", "Peak shape normalization",
			PeakShapeNormalization.values());

	public PeakListTableParameters() {
		super(new Parameter[] { peakLists, commonColumns, dataFileColumns,
				rowHeight, peakShapeNormalization });
	}

}
/*
 * Copyright 2006-2012 The MZmine 2 Development Team
 * 
 * This file is part of MZmine 2.
 * 
 * MZmine 2 is free software; you can redistribute it and/or modify it under the
 * terms of the GNU General Public License as published by the Free Software
 * Foundation; either version 2 of the License, or (at your option) any later
 * version.
 * 
 * MZmine 2 is distributed in the hope that it will be useful, but WITHOUT ANY
 * WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR
 * A PARTICULAR PURPOSE. See the GNU General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License along with
 * MZmine 2; if not, write to the Free Software Foundation, Inc., 51 Franklin St,
 * Fifth Floor, Boston, MA 02110-1301 USA
 */

package net.sf.mzmine.modules.visualization.peaklist;

import net.sf.mzmine.modules.visualization.peaklist.table.CommonColumnType;
import net.sf.mzmine.modules.visualization.peaklist.table.DataFileColumnType;
import net.sf.mzmine.parameters.Parameter;
import net.sf.mzmine.parameters.impl.SimpleParameterSet;
import net.sf.mzmine.parameters.parametertypes.ComboParameter;
import net.sf.mzmine.parameters.parametertypes.IntegerParameter;
import net.sf.mzmine.parameters.parametertypes.PeakListsParameter;

public class PeakListTableParameters extends SimpleParameterSet {

    public static final PeakListsParameter peakLists = new PeakListsParameter();

    public static final ColumnSettingParameter<CommonColumnType> commonColumns = new ColumnSettingParameter<CommonColumnType>(
            "Common columns", "Visible common columns",
            CommonColumnType.values());

    public static final ColumnSettingParameter<DataFileColumnType> dataFileColumns = new ColumnSettingParameter<DataFileColumnType>(
            "Data file columns", "Visible common columns",
            DataFileColumnType.values());

    public static final IntegerParameter rowHeight = new IntegerParameter(
            "Row height", "Row height", 30);

    public static final ComboParameter<PeakShapeNormalization> peakShapeNormalization = new ComboParameter<PeakShapeNormalization>(
            "Peak shape normalization", "Peak shape normalization",
            PeakShapeNormalization.values());

    public PeakListTableParameters() {
        super(new Parameter[] { peakLists, commonColumns, dataFileColumns,
                rowHeight, peakShapeNormalization });

        // Set the default settings for data file columns
        DataFileColumnType[] defaultColumns = new DataFileColumnType[] {
                DataFileColumnType.STATUS, DataFileColumnType.HEIGHT,
                DataFileColumnType.AREA };
        getParameter(dataFileColumns).setValue(defaultColumns);
    }

}
Change in the peak list table visualizer: display only status, height and area by default