/*
 * Distribution.java
 *
 * Copyright (C) 2002-2006 Alexei Drummond and Andrew Rambaut
 *
 * This file is part of BEAST.
 * See the NOTICE file distributed with this work for additional
 * information regarding copyright ownership and licensing.
 *
 * BEAST is free software; you can redistribute it and/or modify
 * it under the terms of the GNU Lesser General Public License as
 * published by the Free Software Foundation; either version 2
 * of the License, or (at your option) any later version.
 *
 *  BEAST is distributed in the hope that it will be useful,
 *  but WITHOUT ANY WARRANTY; without even the implied warranty of
 *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *  GNU Lesser General Public License for more details.
 *
 * You should have received a copy of the GNU Lesser General Public
 * License along with BEAST; if not, write to the
 * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor,
 * Boston, MA  02110-1301  USA
 */

package dr.math;

/**
 * an interface for a distribution.
 *
 * @version $Id: Distribution.java,v 1.7 2005/05/24 20:26:00 rambaut Exp $
 *
 * @author Alexei Drummond
 * @author Andrew Rambaut
 */
public interface Distribution
{
	/**
	 * probability density function of the distribution 
	 * 
	 * @param x argument
	 *
	 * @return pdf value
	 */
	public double pdf(double x);

	/**
	 * the natural log of the probability density function of the distribution 
	 * 
	 * @param x argument
	 *
	 * @return log pdf value
	 */
	public double logPdf(double x);

	/**
	 * cumulative density function of the Gamma distribution 
	 * 
	 * @param x argument
	 *
	 * @return cdf value
	 */
	public double cdf(double x);

	/**
	 * quantile (inverse cumulative density function) of the Gamma distribution
	 *
	 * @param y argument
	 *
	 * @return icdf value
	 */
	public double quantile(double y);
	
	/**
	 * mean of the distribution
	 *
	 * @return mean
	 */
	public double mean();

	/**
	 * variance of the distribution
	 *
	 * @return variance
	 */
	public double variance();

	/**
	 * @return a probability density function representing this distribution
	 */
	public UnivariateFunction getProbabilityDensityFunction();
	
}

/*
 * Distribution.java
 *
 * Copyright (C) 2002-2006 Alexei Drummond and Andrew Rambaut
 *
 * This file is part of BEAST.
 * See the NOTICE file distributed with this work for additional
 * information regarding copyright ownership and licensing.
 *
 * BEAST is free software; you can redistribute it and/or modify
 * it under the terms of the GNU Lesser General Public License as
 * published by the Free Software Foundation; either version 2
 * of the License, or (at your option) any later version.
 *
 *  BEAST is distributed in the hope that it will be useful,
 *  but WITHOUT ANY WARRANTY; without even the implied warranty of
 *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *  GNU Lesser General Public License for more details.
 *
 * You should have received a copy of the GNU Lesser General Public
 * License along with BEAST; if not, write to the
 * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor,
 * Boston, MA  02110-1301  USA
 */

package dr.math;

/**
 * an interface for a distribution.
 *
 * @version $Id: Distribution.java,v 1.7 2005/05/24 20:26:00 rambaut Exp $
 *
 * @author Alexei Drummond
 * @author Andrew Rambaut
 */
public interface Distribution
{
	/**
	 * probability density function of the distribution 
	 * 
	 * @param x argument
	 *
	 * @return pdf value
	 */
	public double pdf(double x);

	/**
	 * the natural log of the probability density function of the distribution 
	 * 
	 * @param x argument
	 *
	 * @return log pdf value
	 */
	public double logPdf(double x);

	/**
	 * cumulative density function of the distribution
	 * 
	 * @param x argument
	 *
	 * @return cdf value
	 */
	public double cdf(double x);

	/**
	 * quantile (inverse cumulative density function) of the distribution
	 *
	 * @param y argument
	 *
	 * @return icdf value
	 */
	public double quantile(double y);
	
	/**
	 * mean of the distribution
	 *
	 * @return mean
	 */
	public double mean();

	/**
	 * variance of the distribution
	 *
	 * @return variance
	 */
	public double variance();

	/**
	 * @return a probability density function representing this distribution
	 */
	public UnivariateFunction getProbabilityDensityFunction();
	
}

fix comments