

/*
 * Copyright (C) 2017 ICOS Group, Newcastle University.  All rights reserved.
 * Contact:  James Alastair McLaughlin <j.a.mclaughlin@ncl.ac.uk>
 *
 * Redistribution and use in source and binary forms, with or without
 * modification, are permitted provided that the following conditions
 * are met:
 *  
 * 1. Redistributions of source code must retain the above copyright
 *    notice, this list of conditions and the following disclaimer.
 *  
 * 2. Redistributions in binary form must reproduce the above copyright
 *    notice, this list of conditions and the following disclaimer in the
 *    documentation and/or other materials provided with the distribution.
 * 
 * THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
 * ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
 * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
 * ARE DISCLAIMED.  IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE LIABLE
 * FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
 * DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS
 * OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
 * HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
 * LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
 * OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
 * SUCH DAMAGE.
 */

"use strict";

var xml = require('xml'),
    serializeIdentified = require('./serializeIdentified')

module.exports = function serializeProvAssociation(sbolDocument, xmlAttribsRef, association) {

    var attr = []

    attr.push({
        'prov:agent': {
            _attr: {
                'rdf:resource': association.agent.uri?association.agent.uri:association.agent
            }
        }
    })

    if (association.plan) {
	attr.push({
            'prov:plan': {
		_attr: {
                    'rdf:resource': association.plan.uri?association.plan.uri:association.plan
		}
            }
	})
    }
    
    association.roles.forEach(function(role) {
	attr.push({
            'prov:hadRole': {
		_attr: {
                    'rdf:resource': role
		}
            }
	})
    })
        
    return serializeIdentified(sbolDocument, xmlAttribsRef, association, 'prov:Association', attr)

}



/*
 * Copyright (C) 2017 ICOS Group, Newcastle University.  All rights reserved.
 * Contact:  James Alastair McLaughlin <j.a.mclaughlin@ncl.ac.uk>
 *
 * Redistribution and use in source and binary forms, with or without
 * modification, are permitted provided that the following conditions
 * are met:
 *  
 * 1. Redistributions of source code must retain the above copyright
 *    notice, this list of conditions and the following disclaimer.
 *  
 * 2. Redistributions in binary form must reproduce the above copyright
 *    notice, this list of conditions and the following disclaimer in the
 *    documentation and/or other materials provided with the distribution.
 * 
 * THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
 * ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
 * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
 * ARE DISCLAIMED.  IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE LIABLE
 * FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
 * DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS
 * OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
 * HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
 * LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
 * OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
 * SUCH DAMAGE.
 */

"use strict";

var xml = require('xml'),
    serializeIdentified = require('./serializeIdentified')

module.exports = function serializeProvAssociation(sbolDocument, xmlAttribsRef, association) {

    var attr = []

    attr.push({
        'prov:agent': {
            _attr: {
                'rdf:resource': association.agent.uri?association.agent.uri:association.agent
            }
        }
    })

    if (association.plan) {
	attr.push({
            'prov:hadPlan': {
		_attr: {
                    'rdf:resource': association.plan.uri?association.plan.uri:association.plan
		}
            }
	})
    }
    
    association.roles.forEach(function(role) {
	attr.push({
            'prov:hadRole': {
		_attr: {
                    'rdf:resource': role
		}
            }
	})
    })
        
    return serializeIdentified(sbolDocument, xmlAttribsRef, association, 'prov:Association', attr)

}

Fix plan to hadPlan