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# BioBERT-finetuned-ner-S800

This model is a fine-tuned version of [dmis-lab/biobert-base-cased-v1.2](https://huggingface.co/dmis-lab/biobert-base-cased-v1.2) on the None dataset.
It achieves the following results on the evaluation set:
- Loss: 0.0693
- Precision: 0.6727
- Recall: 0.7767
- F1: 0.7210
- Accuracy: 0.9773

## Model description

More information needed

## Intended uses & limitations

More information needed

## Training and evaluation data

More information needed

## Training procedure

### Training hyperparameters

The following hyperparameters were used during training:
- learning_rate: 2e-05
- train_batch_size: 8
- eval_batch_size: 8
- seed: 42
- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
- lr_scheduler_type: linear
- num_epochs: 3

### Training results

| Training Loss | Epoch | Step | Validation Loss | Precision | Recall | F1     | Accuracy |
|:-------------:|:-----:|:----:|:---------------:|:---------:|:------:|:------:|:--------:|
| No log        | 1.0   | 55   | 0.0689          | 0.5835    | 0.6573 | 0.6182 | 0.9739   |
| No log        | 2.0   | 110  | 0.0687          | 0.6524    | 0.7514 | 0.6984 | 0.9766   |
| No log        | 3.0   | 165  | 0.0693          | 0.6727    | 0.7767 | 0.7210 | 0.9773   |


### Framework versions

- Transformers 4.29.2
- Pytorch 2.0.1+cu118
- Datasets 2.12.0
- Tokenizers 0.13.3

{"tags": ["generated_from_trainer"], "metrics": ["precision", "recall", "f1", "accuracy"], "model-index": [{"name": "BioBERT-finetuned-ner-S800", "results": []}]}
transformers pytorch tensorboard bert token-classification generated_from_trainer autotrain_compatible endpoints_compatible region:us
TAGS
#transformers #pytorch #tensorboard #bert #token-classification #generated_from_trainer #autotrain_compatible #endpoints_compatible #region-us 

BioBERT-finetuned-ner-S800
==========================


This model is a fine-tuned version of dmis-lab/biobert-base-cased-v1.2 on the None dataset.
It achieves the following results on the evaluation set:


* Loss: 0.0693
* Precision: 0.6727
* Recall: 0.7767
* F1: 0.7210
* Accuracy: 0.9773


Model description
-----------------


More information needed


Intended uses & limitations
---------------------------


More information needed


Training and evaluation data
----------------------------


More information needed


Training procedure
------------------


### Training hyperparameters


The following hyperparameters were used during training:


* learning\_rate: 2e-05
* train\_batch\_size: 8
* eval\_batch\_size: 8
* seed: 42
* optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
* lr\_scheduler\_type: linear
* num\_epochs: 3


### Training results



### Framework versions


* Transformers 4.29.2
* Pytorch 2.0.1+cu118
* Datasets 2.12.0
* Tokenizers 0.13.3



### Training hyperparameters


The following hyperparameters were used during training:


* learning\_rate: 2e-05
* train\_batch\_size: 8
* eval\_batch\_size: 8
* seed: 42
* optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
* lr\_scheduler\_type: linear
* num\_epochs: 3 ### Training results ### Framework versions


* Transformers 4.29.2
* Pytorch 2.0.1+cu118
* Datasets 2.12.0
* Tokenizers 0.13.3
TAGS
#transformers #pytorch #tensorboard #bert #token-classification #generated_from_trainer #autotrain_compatible #endpoints_compatible #region-us 
 ### Training hyperparameters


The following hyperparameters were used during training:


* learning\_rate: 2e-05
* train\_batch\_size: 8
* eval\_batch\_size: 8
* seed: 42
* optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
* lr\_scheduler\_type: linear
* num\_epochs: 3 ### Training results ### Framework versions


* Transformers 4.29.2
* Pytorch 2.0.1+cu118
* Datasets 2.12.0
* Tokenizers 0.13.3