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Regularizing and Optimizing LSTM Language Models | Recurrent neural networks (RNNs), such as long short-term memory networks (LSTMs), serve as a fundamental building block for many sequence learning tasks, including machine translation, language modeling, and question answering. In this paper, we consider the specific problem of word-level language modeling and investigate strategies for regularizing and optimizing LSTM-based models. We propose the weight-dropped LSTM which uses DropConnect on hidden-to-hidden weights as a form of recurrent regularization. Further, we introduce NT-ASGD, a variant of the averaged stochastic gradient method, wherein the averaging trigger is determined using a non-monotonic condition as opposed to being tuned by the user. Using these and other regularization strategies, we achieve state-of-the-art word level perplexities on two data sets: 57.3 on Penn Treebank and 65.8 on WikiText-2. In exploring the effectiveness of a neural cache in conjunction with our proposed model, we achieve an even lower state-of-the-art perplexity of 52.8 on Penn Treebank and 52.0 on WikiText-2. |
Explainability Matters: Backdoor Attacks on Medical Imaging | Deep neural networks have been shown to be vulnerable to backdoor attacks, which could be easily introduced to the training set prior to model training. Recent work has focused on investigating backdoor attacks on natural images or toy datasets. Consequently, the exact impact of backdoors is not yet fully understood in complex real-world applications, such as in medical imaging where misdiagnosis can be very costly. In this paper, we explore the impact of backdoor attacks on a multi-label disease classification task using chest radiography, with the assumption that the attacker can manipulate the training dataset to execute the attack. Extensive evaluation of a state-of-the-art architecture demonstrates that by introducing images with few-pixel perturbations into the training set, an attacker can execute the backdoor successfully without having to be involved with the training procedure. A simple 3$\times$3 pixel trigger can achieve up to 1.00 Area Under the Receiver Operating Characteristic (AUROC) curve on the set of infected images. In the set of clean images, the backdoored neural network could still achieve up to 0.85 AUROC, highlighting the stealthiness of the attack. As the use of deep learning based diagnostic systems proliferates in clinical practice, we also show how explainability is indispensable in this context, as it can identify spatially localized backdoors in inference time. |
Removing the mini-batching error in Bayesian inference using Adaptive Langevin dynamics | Bayesian inference allows to obtain useful information on the parameters of models, either in computational statistics or more recently in the context of Bayesian Neural Networks. The computational cost of usual Monte Carlo methods for sampling a posteriori laws in Bayesian inference scales linearly with the number of data points. One option to reduce it to a fraction of this cost is to resort to mini-batching in conjunction with unadjusted discretizations of Langevin dynamics, in which case only a random fraction of the data is used to estimate the gradient. However, this leads to an additional noise in the dynamics and hence a bias on the invariant measure which is sampled by the Markov chain. We advocate using the so-called Adaptive Langevin dynamics, which is a modification of standard inertial Langevin dynamics with a dynamical friction which automatically corrects for the increased noise arising from mini-batching. We investigate the practical relevance of the assumptions underpinning Adaptive Langevin (constant covariance for the estimation of the gradient), which are not satisfied in typical models of Bayesian inference, and quantify the bias induced by minibatching in this case. We also show how to extend AdL in order to systematically reduce the bias on the posterior distribution by considering a dynamical friction depending on the current value of the parameter to sample. |
Classification of Chinese Handwritten Numbers with Labeled Projective Dictionary Pair Learning | Dictionary learning is a cornerstone of image classification. We set out to address a longstanding challenge in using dictionary learning for classification; that is to simultaneously maximise the discriminability and sparse-representability power of the learned dictionaries. Upon this premise, we designed class-specific dictionaries incorporating three factors: discriminability, sparsity and classification error. We integrated these metrics into a unified cost function and adopted a new feature space, i.e., histogram of oriented gradients (HOG), to generate the dictionary atoms. The rationale of using HOG features for designing the dictionaries is their strength in describing fine details of crowded images. The results of applying the proposed method in the classification of Chinese handwritten numbers demonstrated enhanced classification performance $(\sim98\%)$ compared to state-of-the-art deep learning techniques (i.e., SqueezeNet, GoogLeNet and MobileNetV2), but with a fraction of parameters. Furthermore, combination of the HOG features with dictionary learning enhances the accuracy by $11\%$ compared to the case where only pixel domain data are used. These results were supported when the proposed method was applied to both Arabic and English handwritten number databases. |
Dimensionality Reduced Training by Pruning and Freezing Parts of a Deep Neural Network, a Survey | State-of-the-art deep learning models have a parameter count that reaches into the billions. Training, storing and transferring such models is energy and time consuming, thus costly. A big part of these costs is caused by training the network. Model compression lowers storage and transfer costs, and can further make training more efficient by decreasing the number of computations in the forward and/or backward pass. Thus, compressing networks also at training time while maintaining a high performance is an important research topic. This work is a survey on methods which reduce the number of trained weights in deep learning models throughout the training. Most of the introduced methods set network parameters to zero which is called pruning. The presented pruning approaches are categorized into pruning at initialization, lottery tickets and dynamic sparse training. Moreover, we discuss methods that freeze parts of a network at its random initialization. By freezing weights, the number of trainable parameters is shrunken which reduces gradient computations and the dimensionality of the model's optimization space. In this survey we first propose dimensionality reduced training as an underlying mathematical model that covers pruning and freezing during training. Afterwards, we present and discuss different dimensionality reduced training methods. |
Efficient Reward Poisoning Attacks on Online Deep Reinforcement Learning | We study data poisoning attacks on online deep reinforcement learning (DRL) where the attacker is oblivious to the learning algorithm used by the agent and does not necessarily have full knowledge of the environment. We demonstrate the intrinsic vulnerability of state-of-the-art DRL algorithms by designing a general reward poisoning framework called adversarial MDP attacks. We instantiate our framework to construct several new attacks which only corrupt the rewards for a small fraction of the total training timesteps and make the agent learn a low-performing policy. Our key insight is that the state-of-the-art DRL algorithms strategically explore the environment to find a high-performing policy. Our attacks leverage this insight to construct a corrupted environment for misleading the agent towards learning low-performing policies with a limited attack budget. We provide a theoretical analysis of the efficiency of our attack and perform an extensive evaluation. Our results show that our attacks efficiently poison agents learning with a variety of state-of-the-art DRL algorithms, such as DQN, PPO, SAC, etc. under several popular classical control and MuJoCo environments. |
Deep Learning for Agile Effort Estimation Have We Solved the Problem Yet? | In the last decade, several studies have proposed the use of automated techniques to estimate the effort of agile software development. In this paper we perform a close replication and extension of a seminal work proposing the use of Deep Learning for agile effort estimation (namely Deep-SE), which has set the state-of-the-art since. Specifically, we replicate three of the original research questions aiming at investigating the effectiveness of Deep-SE for both within-project and cross-project effort estimation. We benchmark Deep-SE against three baseline techniques (i.e., Random, Mean and Median effort prediction) and a previously proposed method to estimate agile software project development effort (dubbed TF/IDF-SE), as done in the original study. To this end, we use both the data from the original study and a new larger dataset of 31,960 issues, which we mined from 29 open-source projects. Using more data allows us to strengthen our confidence in the results and further mitigate the threat to the external validity of the study. We also extend the original study by investigating two additional research questions. One evaluates the accuracy of Deep-SE when the training set is augmented with issues from all other projects available in the repository at the time of estimation, and the other examines whether an expensive pre-training step used by the original Deep-SE, has any beneficial effect on its accuracy and convergence speed. The results of our replication show that Deep-SE outperforms the Median baseline estimator and TF/IDF-SE in only very few cases with statistical significance (8/42 and 9/32 cases, respectively), thus confounding previous findings on the efficacy of Deep-SE. The two additional RQs revealed that neither augmenting the training set nor pre-training Deep-SE play a role in improving its accuracy and convergence speed. ... |
DeepLABNet: End-to-end Learning of Deep Radial Basis Networks with Fully Learnable Basis Functions | From fully connected neural networks to convolutional neural networks, the learned parameters within a neural network have been primarily relegated to the linear parameters (e.g., convolutional filters). The non-linear functions (e.g., activation functions) have largely remained, with few exceptions in recent years, parameter-less, static throughout training, and seen limited variation in design. Largely ignored by the deep learning community, radial basis function (RBF) networks provide an interesting mechanism for learning more complex non-linear activation functions in addition to the linear parameters in a network. However, the interest in RBF networks has waned over time due to the difficulty of integrating RBFs into more complex deep neural network architectures in a tractable and stable manner. In this work, we present a novel approach that enables end-to-end learning of deep RBF networks with fully learnable activation basis functions in an automatic and tractable manner. We demonstrate that our approach for enabling the use of learnable activation basis functions in deep neural networks, which we will refer to as DeepLABNet, is an effective tool for automated activation function learning within complex network architectures. |
Automatic heterogeneous quantization of deep neural networks for low-latency inference on the edge for particle detectors | Although the quest for more accurate solutions is pushing deep learning research towards larger and more complex algorithms, edge devices demand efficient inference and therefore reduction in model size, latency and energy consumption. One technique to limit model size is quantization, which implies using fewer bits to represent weights and biases. Such an approach usually results in a decline in performance. Here, we introduce a method for designing optimally heterogeneously quantized versions of deep neural network models for minimum-energy, high-accuracy, nanosecond inference and fully automated deployment on chip. With a per-layer, per-parameter type automatic quantization procedure, sampling from a wide range of quantizers, model energy consumption and size are minimized while high accuracy is maintained. This is crucial for the event selection procedure in proton-proton collisions at the CERN Large Hadron Collider, where resources are strictly limited and a latency of ${\mathcal O}(1)~\mu$s is required. Nanosecond inference and a resource consumption reduced by a factor of 50 when implemented on field-programmable gate array hardware are achieved. |
Session-based Recommendation with Graph Neural Networks | The problem of session-based recommendation aims to predict user actions based on anonymous sessions. Previous methods model a session as a sequence and estimate user representations besides item representations to make recommendations. Though achieved promising results, they are insufficient to obtain accurate user vectors in sessions and neglect complex transitions of items. To obtain accurate item embedding and take complex transitions of items into account, we propose a novel method, i.e. Session-based Recommendation with Graph Neural Networks, SR-GNN for brevity. In the proposed method, session sequences are modeled as graph-structured data. Based on the session graph, GNN can capture complex transitions of items, which are difficult to be revealed by previous conventional sequential methods. Each session is then represented as the composition of the global preference and the current interest of that session using an attention network. Extensive experiments conducted on two real datasets show that SR-GNN evidently outperforms the state-of-the-art session-based recommendation methods consistently. |
A survey of algorithmic recourse: definitions, formulations, solutions, and prospects | Machine learning is increasingly used to inform decision-making in sensitive situations where decisions have consequential effects on individuals' lives. In these settings, in addition to requiring models to be accurate and robust, socially relevant values such as fairness, privacy, accountability, and explainability play an important role for the adoption and impact of said technologies. In this work, we focus on algorithmic recourse, which is concerned with providing explanations and recommendations to individuals who are unfavourably treated by automated decision-making systems. We first perform an extensive literature review, and align the efforts of many authors by presenting unified definitions, formulations, and solutions to recourse. Then, we provide an overview of the prospective research directions towards which the community may engage, challenging existing assumptions and making explicit connections to other ethical challenges such as security, privacy, and fairness. |
On the Compression of Neural Networks Using $\ell_0$-Norm Regularization and Weight Pruning | Despite the growing availability of high-capacity computational platforms, implementation complexity still has been a great concern for the real-world deployment of neural networks. This concern is not exclusively due to the huge costs of state-of-the-art network architectures, but also due to the recent push towards edge intelligence and the use of neural networks in embedded applications. In this context, network compression techniques have been gaining interest due to their ability for reducing deployment costs while keeping inference accuracy at satisfactory levels. The present paper is dedicated to the development of a novel compression scheme for neural networks. To this end, a new $\ell_0$-norm-based regularization approach is firstly developed, which is capable of inducing strong sparseness in the network during training. Then, targeting the smaller weights of the trained network with pruning techniques, smaller yet highly effective networks can be obtained. The proposed compression scheme also involves the use of $\ell_2$-norm regularization to avoid overfitting as well as fine tuning to improve the performance of the pruned network. Experimental results are presented aiming to show the effectiveness of the proposed scheme as well as to make comparisons with competing approaches. |
Block-Term Tensor Decomposition Model Selection and Computation: The Bayesian Way | The so-called block-term decomposition (BTD) tensor model, especially in its rank-$(L_r,L_r,1)$ version, has been recently receiving increasing attention due to its enhanced ability of representing systems and signals that are composed of \emph{blocks} of rank higher than one, a scenario encountered in numerous and diverse applications. Uniqueness conditions and fitting methods have thus been thoroughly studied. Nevertheless, the challenging problem of estimating the BTD model structure, namely the number of block terms, $R$, and their individual ranks, $L_r$, has only recently started to attract significant attention, mainly through regularization-based approaches which entail the need to tune the regularization parameter(s). In this work, we build on ideas of sparse Bayesian learning (SBL) and put forward a fully automated Bayesian approach. Through a suitably crafted multi-level \emph{hierarchical} probabilistic model, which gives rise to heavy-tailed prior distributions for the BTD factors, structured sparsity is \emph{jointly} imposed. Ranks are then estimated from the numbers of blocks ($R$) and columns ($L_r$) of non-negligible energy. Approximate posterior inference is implemented, within the variational inference framework. The resulting iterative algorithm completely avoids hyperparameter tuning, which is a significant defect of regularization-based methods. Alternative probabilistic models are also explored and the connections with their regularization-based counterparts are brought to light with the aid of the associated maximum a-posteriori (MAP) estimators. We report simulation results with both synthetic and real-word data, which demonstrate the merits of the proposed method in terms of both rank estimation and model fitting as compared to state-of-the-art relevant methods. |
Generalization Bounds For Unsupervised and Semi-Supervised Learning With Autoencoders | Autoencoders are widely used for unsupervised learning and as a regularization scheme in semi-supervised learning. However, theoretical understanding of their generalization properties and of the manner in which they can assist supervised learning has been lacking. We utilize recent advances in the theory of deep learning generalization, together with a novel reconstruction loss, to provide generalization bounds for autoencoders. To the best of our knowledge, this is the first such bound. We further show that, under appropriate assumptions, an autoencoder with good generalization properties can improve any semi-supervised learning scheme. We support our theoretical results with empirical demonstrations. |
GOSH: Task Scheduling Using Deep Surrogate Models in Fog Computing Environments | Recently, intelligent scheduling approaches using surrogate models have been proposed to efficiently allocate volatile tasks in heterogeneous fog environments. Advances like deterministic surrogate models, deep neural networks (DNN) and gradient-based optimization allow low energy consumption and response times to be reached. However, deterministic surrogate models, which estimate objective values for optimization, do not consider the uncertainties in the distribution of the Quality of Service (QoS) objective function that can lead to high Service Level Agreement (SLA) violation rates. Moreover, the brittle nature of DNN training and prevent such models from reaching minimal energy or response times. To overcome these difficulties, we present a novel scheduler: GOSH i.e. Gradient Based Optimization using Second Order derivatives and Heteroscedastic Deep Surrogate Models. GOSH uses a second-order gradient based optimization approach to obtain better QoS and reduce the number of iterations to converge to a scheduling decision, subsequently lowering the scheduling time. Instead of a vanilla DNN, GOSH uses a Natural Parameter Network to approximate objective scores. Further, a Lower Confidence Bound optimization approach allows GOSH to find an optimal trade-off between greedy minimization of the mean latency and uncertainty reduction by employing error-based exploration. Thus, GOSH and its co-simulation based extension GOSH*, can adapt quickly and reach better objective scores than baseline methods. We show that GOSH* reaches better objective scores than GOSH, but it is suitable only for high resource availability settings, whereas GOSH is apt for limited resource settings. Real system experiments for both GOSH and GOSH* show significant improvements against the state-of-the-art in terms of energy consumption, response time and SLA violations by up to 18, 27 and 82 percent, respectively. |
Learning and Decision-Making with Data: Optimal Formulations and Phase Transitions | We study the problem of designing optimal learning and decision-making formulations when only historical data is available. Prior work typically commits to a particular class of data-driven formulation and subsequently tries to establish out-of-sample performance guarantees. We take here the opposite approach. We define first a sensible yard stick with which to measure the quality of any data-driven formulation and subsequently seek to find an optimal such formulation. Informally, any data-driven formulation can be seen to balance a measure of proximity of the estimated cost to the actual cost while guaranteeing a level of out-of-sample performance. Given an acceptable level of out-of-sample performance, we construct explicitly a data-driven formulation that is uniformly closer to the true cost than any other formulation enjoying the same out-of-sample performance. We show the existence of three distinct out-of-sample performance regimes (a superexponential regime, an exponential regime and a subexponential regime) between which the nature of the optimal data-driven formulation experiences a phase transition. The optimal data-driven formulations can be interpreted as a classically robust formulation in the superexponential regime, an entropic distributionally robust formulation in the exponential regime and finally a variance penalized formulation in the subexponential regime. This final observation unveils a surprising connection between these three, at first glance seemingly unrelated, data-driven formulations which until now remained hidden. |
Generative Modeling with Optimal Transport Maps | With the discovery of Wasserstein GANs, Optimal Transport (OT) has become a powerful tool for large-scale generative modeling tasks. In these tasks, OT cost is typically used as the loss for training GANs. In contrast to this approach, we show that the OT map itself can be used as a generative model, providing comparable performance. Previous analogous approaches consider OT maps as generative models only in the latent spaces due to their poor performance in the original high-dimensional ambient space. In contrast, we apply OT maps directly in the ambient space, e.g., a space of high-dimensional images. First, we derive a min-max optimization algorithm to efficiently compute OT maps for the quadratic cost (Wasserstein-2 distance). Next, we extend the approach to the case when the input and output distributions are located in the spaces of different dimensions and derive error bounds for the computed OT map. We evaluate the algorithm on image generation and unpaired image restoration tasks. In particular, we consider denoising, colorization, and inpainting, where the optimality of the restoration map is a desired attribute, since the output (restored) image is expected to be close to the input (degraded) one. |
COVIDx-US -- An open-access benchmark dataset of ultrasound imaging data for AI-driven COVID-19 analytics | The COVID-19 pandemic continues to have a devastating effect on the health and well-being of the global population. Apart from the global health crises, the pandemic has also caused significant economic and financial difficulties and socio-physiological implications. Effective screening, triage, treatment planning, and prognostication of outcome plays a key role in controlling the pandemic. Recent studies have highlighted the role of point-of-care ultrasound imaging for COVID-19 screening and prognosis, particularly given that it is non-invasive, globally available, and easy-to-sanitize. Motivated by these attributes and the promise of artificial intelligence tools to aid clinicians, we introduce COVIDx-US, an open-access benchmark dataset of COVID-19 related ultrasound imaging data. The COVIDx-US dataset was curated from multiple sources and its current version, i.e., v1.2., consists of 150 lung ultrasound videos and 12,943 processed images of patients infected with COVID-19 infection, non-COVID-19 infection, other lung diseases/conditions, as well as normal control cases. The COVIDx-US is the largest open-access fully-curated dataset of its kind that has been systematically curated, processed, and validated specifically for the purpose of building and evaluating artificial intelligence algorithms and models. |
Learning Multi-Human Optical Flow | The optical flow of humans is well known to be useful for the analysis of human action. Recent optical flow methods focus on training deep networks to approach the problem. However, the training data used by them does not cover the domain of human motion. Therefore, we develop a dataset of multi-human optical flow and train optical flow networks on this dataset. We use a 3D model of the human body and motion capture data to synthesize realistic flow fields in both single- and multi-person images. We then train optical flow networks to estimate human flow fields from pairs of images. We demonstrate that our trained networks are more accurate than a wide range of top methods on held-out test data and that they can generalize well to real image sequences. The code, trained models and the dataset are available for research. |
DualCF: Efficient Model Extraction Attack from Counterfactual Explanations | Cloud service providers have launched Machine-Learning-as-a-Service (MLaaS) platforms to allow users to access large-scale cloudbased models via APIs. In addition to prediction outputs, these APIs can also provide other information in a more human-understandable way, such as counterfactual explanations (CF). However, such extra information inevitably causes the cloud models to be more vulnerable to extraction attacks which aim to steal the internal functionality of models in the cloud. Due to the black-box nature of cloud models, however, a vast number of queries are inevitably required by existing attack strategies before the substitute model achieves high fidelity. In this paper, we propose a novel simple yet efficient querying strategy to greatly enhance the querying efficiency to steal a classification model. This is motivated by our observation that current querying strategies suffer from decision boundary shift issue induced by taking far-distant queries and close-to-boundary CFs into substitute model training. We then propose DualCF strategy to circumvent the above issues, which is achieved by taking not only CF but also counterfactual explanation of CF (CCF) as pairs of training samples for the substitute model. Extensive and comprehensive experimental evaluations are conducted on both synthetic and real-world datasets. The experimental results favorably illustrate that DualCF can produce a high-fidelity model with fewer queries efficiently and effectively. |
The Neural Metric Factorization for Computational Drug Repositioning | Computational drug repositioning aims to discover new therapeutic diseases for marketed drugs and has the advantages of low cost, short development cycle, and high controllability compared to traditional drug development. The matrix factorization model has become the cornerstone technique for computational drug repositioning due to its ease of implementation and excellent scalability. However, the matrix factorization model uses the inner product to represent the association between drugs and diseases, which is lacking in expressive ability. Moreover, the degree of similarity of drugs or diseases could not be implied on their respective latent factor vectors, which is not satisfy the common sense of drug discovery. Therefore, a neural metric factorization model (NMF) for computational drug repositioning is proposed in this work. We novelly consider the latent factor vector of drugs and diseases as a point in the high-dimensional coordinate system and propose a generalized Euclidean distance to represent the association between drugs and diseases to compensate for the shortcomings of the inner product. Furthermore, by embedding multiple drug (disease) metrics information into the encoding space of the latent factor vector, the information about the similarity between drugs (diseases) can be reflected in the distance between latent factor vectors. Finally, we conduct wide analysis experiments on two real datasets to demonstrate the effectiveness of the above improvement points and the superiority of the NMF model. |
Explainable Machine Learning using Real, Synthetic and Augmented Fire Tests to Predict Fire Resistance and Spalling of RC Columns | This paper presents the development of systematic machine learning (ML) approach to enable explainable and rapid assessment of fire resistance and fire-induced spalling of reinforced concrete (RC) columns. The developed approach comprises of an ensemble of three novel ML algorithms namely; random forest (RF), extreme gradient boosted trees (ExGBT), and deep learning (DL). These algorithms are trained to account for a wide collection of geometric characteristics and material properties, as well as loading conditions to examine fire performance of normal and high strength RC columns by analyzing a comprehensive database of fire tests comprising of over 494 observations. The developed ensemble is also capable of presenting quantifiable insights to ML predictions; thus, breaking free from the notion of 'blackbox' ML and establishing a solid step towards transparent and explainable ML. Most importantly, this work tackles the scarcity of available fire tests by proposing new techniques to leverage the use of real, synthetic and augmented fire test observations. The developed ML ensemble has been calibrated and validated for standard and design fire exposures and for one, two, three and four-sided fire exposures thus; covering a wide range of practical scenarios present during fire incidents. When fully deployed, the developed ensemble can analyze over 5,000 RC columns in under 60 seconds thus, providing an attractive solution for researchers and practitioners. The presented approach can also be easily extended for evaluating fire resistance and spalling of other structural members and under varying fire scenarios and loading conditions and hence paves the way to modernize the state of this research area and practice. |
ENIGMA: Efficient Learning-based Inference Guiding Machine | ENIGMA is a learning-based method for guiding given clause selection in saturation-based theorem provers. Clauses from many proof searches are classified as positive and negative based on their participation in the proofs. An efficient classification model is trained on this data, using fast feature-based characterization of the clauses . The learned model is then tightly linked with the core prover and used as a basis of a new parameterized evaluation heuristic that provides fast ranking of all generated clauses. The approach is evaluated on the E prover and the CASC 2016 AIM benchmark, showing a large increase of E's performance. |
Pushing the boundaries of parallel Deep Learning -- A practical approach | This work aims to assess the state of the art of data parallel deep neural network training, trying to identify potential research tracks to be exploited for performance improvement. Beside, it presents a design for a practical C++ library dedicated at implementing and unifying the current state of the art methodologies for parallel training in a performance-conscious framework, allowing the user to explore novel strategies without departing significantly from its usual work-flow. |
Latent Variable Time-varying Network Inference | In many applications of finance, biology and sociology, complex systems involve entities interacting with each other. These processes have the peculiarity of evolving over time and of comprising latent factors, which influence the system without being explicitly measured. In this work we present latent variable time-varying graphical lasso (LTGL), a method for multivariate time-series graphical modelling that considers the influence of hidden or unmeasurable factors. The estimation of the contribution of the latent factors is embedded in the model which produces both sparse and low-rank components for each time point. In particular, the first component represents the connectivity structure of observable variables of the system, while the second represents the influence of hidden factors, assumed to be few with respect to the observed variables. Our model includes temporal consistency on both components, providing an accurate evolutionary pattern of the system. We derive a tractable optimisation algorithm based on alternating direction method of multipliers, and develop a scalable and efficient implementation which exploits proximity operators in closed form. LTGL is extensively validated on synthetic data, achieving optimal performance in terms of accuracy, structure learning and scalability with respect to ground truth and state-of-the-art methods for graphical inference. We conclude with the application of LTGL to real case studies, from biology and finance, to illustrate how our method can be successfully employed to gain insights on multivariate time-series data. |
Addressing the Real-world Class Imbalance Problem in Dermatology | Class imbalance is a common problem in medical diagnosis, causing a standard classifier to be biased towards the common classes and perform poorly on the rare classes. This is especially true for dermatology, a specialty with thousands of skin conditions but many of which have low prevalence in the real world. Motivated by recent advances, we explore few-shot learning methods as well as conventional class imbalance techniques for the skin condition recognition problem and propose an evaluation setup to fairly assess the real-world utility of such approaches. We find the performance of few-show learning methods does not reach that of conventional class imbalance techniques, but combining the two approaches using a novel ensemble improves model performance, especially for rare classes. We conclude that ensembling can be useful to address the class imbalance problem, yet progress can further be accelerated by real-world evaluation setups for benchmarking new methods. |
Border Algorithms for Computing Hasse Diagrams of Arbitrary Lattices | The Border algorithm and the iPred algorithm find the Hasse diagrams of FCA lattices. We show that they can be generalized to arbitrary lattices. In the case of iPred, this requires the identification of a join-semilattice homomorphism into a distributive lattice. |
Dimensionality Reduction of Affine Variational Inequalities Using Random Projections | We present a method for dimensionality reduction of an affine variational inequality (AVI) defined over a compact feasible region. Centered around the Johnson Lindenstrauss lemma, our method is a randomized algorithm that produces with high probability an approximate solution for the given AVI by solving a lower-dimensional AVI. The algorithm allows the lower dimension to be chosen based on the quality of approximation desired. The algorithm can also be used as a subroutine in an exact algorithm for generating an initial point close to the solution. The lower-dimensional AVI is obtained by appropriately projecting the original AVI on a randomly chosen subspace. The lower-dimensional AVI is solved using standard solvers and from this solution an approximate solution to the original AVI is recovered through an inexpensive process. Our numerical experiments corroborate the theoretical results and validate that the algorithm provides a good approximation at low dimensions and substantial savings in time for an exact solution. |
Noise Distribution Adaptive Self-Supervised Image Denoising using Tweedie Distribution and Score Matching | Tweedie distributions are a special case of exponential dispersion models, which are often used in classical statistics as distributions for generalized linear models. Here, we reveal that Tweedie distributions also play key roles in modern deep learning era, leading to a distribution independent self-supervised image denoising formula without clean reference images. Specifically, by combining with the recent Noise2Score self-supervised image denoising approach and the saddle point approximation of Tweedie distribution, we can provide a general closed-form denoising formula that can be used for large classes of noise distributions without ever knowing the underlying noise distribution. Similar to the original Noise2Score, the new approach is composed of two successive steps: score matching using perturbed noisy images, followed by a closed form image denoising formula via distribution-independent Tweedie's formula. This also suggests a systematic algorithm to estimate the noise model and noise parameters for a given noisy image data set. Through extensive experiments, we demonstrate that the proposed method can accurately estimate noise models and parameters, and provide the state-of-the-art self-supervised image denoising performance in the benchmark dataset and real-world dataset. |
Topic Compositional Neural Language Model | We propose a Topic Compositional Neural Language Model (TCNLM), a novel method designed to simultaneously capture both the global semantic meaning and the local word ordering structure in a document. The TCNLM learns the global semantic coherence of a document via a neural topic model, and the probability of each learned latent topic is further used to build a Mixture-of-Experts (MoE) language model, where each expert (corresponding to one topic) is a recurrent neural network (RNN) that accounts for learning the local structure of a word sequence. In order to train the MoE model efficiently, a matrix factorization method is applied, by extending each weight matrix of the RNN to be an ensemble of topic-dependent weight matrices. The degree to which each member of the ensemble is used is tied to the document-dependent probability of the corresponding topics. Experimental results on several corpora show that the proposed approach outperforms both a pure RNN-based model and other topic-guided language models. Further, our model yields sensible topics, and also has the capacity to generate meaningful sentences conditioned on given topics. |
Learning Gaussian Mixtures with Generalised Linear Models: Precise Asymptotics in High-dimensions | Generalised linear models for multi-class classification problems are one of the fundamental building blocks of modern machine learning tasks. In this manuscript, we characterise the learning of a mixture of $K$ Gaussians with generic means and covariances via empirical risk minimisation (ERM) with any convex loss and regularisation. In particular, we prove exact asymptotics characterising the ERM estimator in high-dimensions, extending several previous results about Gaussian mixture classification in the literature. We exemplify our result in two tasks of interest in statistical learning: a) classification for a mixture with sparse means, where we study the efficiency of $\ell_1$ penalty with respect to $\ell_2$; b) max-margin multi-class classification, where we characterise the phase transition on the existence of the multi-class logistic maximum likelihood estimator for $K>2$. Finally, we discuss how our theory can be applied beyond the scope of synthetic data, showing that in different cases Gaussian mixtures capture closely the learning curve of classification tasks in real data sets. |
Out of the Black Box: Properties of deep neural networks and their applications | Deep neural networks are powerful machine learning approaches that have exhibited excellent results on many classification tasks. However, they are considered as black boxes and some of their properties remain to be formalized. In the context of image recognition, it is still an arduous task to understand why an image is recognized or not. In this study, we formalize some properties shared by eight state-of-the-art deep neural networks in order to grasp the principles allowing a given deep neural network to classify an image. Our results, tested on these eight networks, show that an image can be sub-divided into several regions (patches) responding at different degrees of probability (local property). With the same patch, some locations in the image can answer two (or three) orders of magnitude higher than other locations (spatial property). Some locations are activators and others inhibitors (activation-inhibition property). The repetition of the same patch can increase (or decrease) the probability of recognition of an object (cumulative property). Furthermore, we propose a new approach called Deepception that exploits these properties to deceive a deep neural network. We obtain for the VGG-VDD-19 neural network a fooling ratio of 88\%. Thanks to our "Psychophysics" approach, no prior knowledge on the networks architectures is required. |
Disentangled Relational Representations for Explaining and Learning from Demonstration | Learning from demonstration is an effective method for human users to instruct desired robot behaviour. However, for most non-trivial tasks of practical interest, efficient learning from demonstration depends crucially on inductive bias in the chosen structure for rewards/costs and policies. We address the case where this inductive bias comes from an exchange with a human user. We propose a method in which a learning agent utilizes the information bottleneck layer of a high-parameter variational neural model, with auxiliary loss terms, in order to ground abstract concepts such as spatial relations. The concepts are referred to in natural language instructions and are manifested in the high-dimensional sensory input stream the agent receives from the world. We evaluate the properties of the latent space of the learned model in a photorealistic synthetic environment and particularly focus on examining its usability for downstream tasks. Additionally, through a series of controlled table-top manipulation experiments, we demonstrate that the learned manifold can be used to ground demonstrations as symbolic plans, which can then be executed on a PR2 robot. |
Decentralized Joint-Sparse Signal Recovery: A Sparse Bayesian Learning Approach | This work proposes a decentralized, iterative, Bayesian algorithm called CB-DSBL for in-network estimation of multiple jointly sparse vectors by a network of nodes, using noisy and underdetermined linear measurements. The proposed algorithm exploits the network wide joint sparsity of the un- known sparse vectors to recover them from significantly fewer number of local measurements compared to standalone sparse signal recovery schemes. To reduce the amount of inter-node communication and the associated overheads, the nodes exchange messages with only a small subset of their single hop neighbors. Under this communication scheme, we separately analyze the convergence of the underlying Alternating Directions Method of Multipliers (ADMM) iterations used in our proposed algorithm and establish its linear convergence rate. The findings from the convergence analysis of decentralized ADMM are used to accelerate the convergence of the proposed CB-DSBL algorithm. Using Monte Carlo simulations, we demonstrate the superior signal reconstruction as well as support recovery performance of our proposed algorithm compared to existing decentralized algorithms: DRL-1, DCOMP and DCSP. |
WEnets: A Convolutional Framework for Evaluating Audio Waveforms | We describe a new convolutional framework for waveform evaluation, WEnets, and build a Narrowband Audio Waveform Evaluation Network, or NAWEnet, using this framework. NAWEnet is single-ended (or no-reference) and was trained three separate times in order to emulate PESQ, POLQA, or STOI with testing correlations 0.95, 0.92, and 0.95, respectively when training on only 50% of available data and testing on 40%. Stacks of 1-D convolutional layers and non-linear downsampling learn which features are important for quality or intelligibility estimation. This straightforward architecture simplifies the interpretation of its inner workings and paves the way for future investigations into higher sample rates and accurate no-reference subjective speech quality predictions. |
High-dimensional Index Volatility Models via Stein's Identity | We study the estimation of the parametric components of single and multiple index volatility models. Using the first- and second-order Stein's identities, we develop methods that are applicable for the estimation of the variance index in the high-dimensional setting requiring finite moment condition, which allows for heavy-tailed data. Our approach complements the existing literature in the low-dimensional setting, while relaxing the conditions on estimation, and provides a novel approach in the high-dimensional setting. We prove that the statistical rate of convergence of our variance index estimators consists of a parametric rate and a nonparametric rate, where the latter appears from the estimation of the mean link function. However, under standard assumptions, the parametric rate dominates the rate of convergence and our results match the minimax optimal rate for the mean index estimation. Simulation results illustrate finite sample properties of our methodology and back our theoretical conclusions. |
Up to 100$\times$ Faster Data-free Knowledge Distillation | Data-free knowledge distillation (DFKD) has recently been attracting increasing attention from research communities, attributed to its capability to compress a model only using synthetic data. Despite the encouraging results achieved, state-of-the-art DFKD methods still suffer from the inefficiency of data synthesis, making the data-free training process extremely time-consuming and thus inapplicable for large-scale tasks. In this work, we introduce an efficacious scheme, termed as FastDFKD, that allows us to accelerate DFKD by a factor of orders of magnitude. At the heart of our approach is a novel strategy to reuse the shared common features in training data so as to synthesize different data instances. Unlike prior methods that optimize a set of data independently, we propose to learn a meta-synthesizer that seeks common features as the initialization for the fast data synthesis. As a result, FastDFKD achieves data synthesis within only a few steps, significantly enhancing the efficiency of data-free training. Experiments over CIFAR, NYUv2, and ImageNet demonstrate that the proposed FastDFKD achieves 10$\times$ and even 100$\times$ acceleration while preserving performances on par with state of the art. Code is available at \url{https://github.com/zju-vipa/Fast-Datafree}. |
What's Wrong with Deep Learning in Tree Search for Combinatorial Optimization | Combinatorial optimization lies at the core of many real-world problems. Especially since the rise of graph neural networks (GNNs), the deep learning community has been developing solvers that derive solutions to NP-hard problems by learning the problem-specific solution structure. However, reproducing the results of these publications proves to be difficult. We make three contributions. First, we present an open-source benchmark suite for the NP-hard Maximum Independent Set problem, in both its weighted and unweighted variants. The suite offers a unified interface to various state-of-the-art traditional and machine learning-based solvers. Second, using our benchmark suite, we conduct an in-depth analysis of the popular guided tree search algorithm by Li et al. [NeurIPS 2018], testing various configurations on small and large synthetic and real-world graphs. By re-implementing their algorithm with a focus on code quality and extensibility, we show that the graph convolution network used in the tree search does not learn a meaningful representation of the solution structure, and can in fact be replaced by random values. Instead, the tree search relies on algorithmic techniques like graph kernelization to find good solutions. Thus, the results from the original publication are not reproducible. Third, we extend the analysis to compare the tree search implementations to other solvers, showing that the classical algorithmic solvers often are faster, while providing solutions of similar quality. Additionally, we analyze a recent solver based on reinforcement learning and observe that for this solver, the GNN is responsible for the competitive solution quality. |
Predicting student performance using data from an auto-grading system | As online auto-grading systems appear, information obtained from those systems can potentially enable researchers to create predictive models to predict student behaviour and performances. In the University of Waterloo, the ECE 150 (Fundamentals of Programming) Instructional Team wants to get an insight into how to allocate the limited teaching resources better to achieve improved educational outcomes. Currently, the Instructional Team allocates tutoring time in a reactive basis. They help students "as-requested". This approach serves those students with the wherewithal to request help; however, many of the students who are struggling do not reach out for assistance. Therefore, we, as the Research Team, want to explore if we can determine students which need help by looking into the data from our auto-grading system, Marmoset. In this paper, we conducted experiments building decision-tree and linear-regression models with various features extracted from the Marmoset auto-grading system, including passing rate, testcase outcomes, number of submissions and submission time intervals (the time interval between the student's first reasonable submission and the deadline). For each feature, we interpreted the result at the confusion matrix level. Specifically for poor-performance students, we show that the linear-regression model using submission time intervals performs the best among all models in terms of Precision and F-Measure. We also show that for students who are misclassified into poor-performance students, they have the lowest actual grades in the linear-regression model among all models. In addition, we show that for the midterm, the submission time interval of the last assignment before the midterm predicts the midterm performance the most. However, for the final exam, the midterm performance contributes the most on the final exam performance. |
Meta-GNN: On Few-shot Node Classification in Graph Meta-learning | Meta-learning has received a tremendous recent attention as a possible approach for mimicking human intelligence, i.e., acquiring new knowledge and skills with little or even no demonstration. Most of the existing meta-learning methods are proposed to tackle few-shot learning problems such as image and text, in rather Euclidean domain. However, there are very few works applying meta-learning to non-Euclidean domains, and the recently proposed graph neural networks (GNNs) models do not perform effectively on graph few-shot learning problems. Towards this, we propose a novel graph meta-learning framework -- Meta-GNN -- to tackle the few-shot node classification problem in graph meta-learning settings. It obtains the prior knowledge of classifiers by training on many similar few-shot learning tasks and then classifies the nodes from new classes with only few labeled samples. Additionally, Meta-GNN is a general model that can be straightforwardly incorporated into any existing state-of-the-art GNN. Our experiments conducted on three benchmark datasets demonstrate that our proposed approach not only improves the node classification performance by a large margin on few-shot learning problems in meta-learning paradigm, but also learns a more general and flexible model for task adaption. |
Nonparametric Bayesian Double Articulation Analyzer for Direct Language Acquisition from Continuous Speech Signals | Human infants can discover words directly from unsegmented speech signals without any explicitly labeled data. In this paper, we develop a novel machine learning method called nonparametric Bayesian double articulation analyzer (NPB-DAA) that can directly acquire language and acoustic models from observed continuous speech signals. For this purpose, we propose an integrative generative model that combines a language model and an acoustic model into a single generative model called the "hierarchical Dirichlet process hidden language model" (HDP-HLM). The HDP-HLM is obtained by extending the hierarchical Dirichlet process hidden semi-Markov model (HDP-HSMM) proposed by Johnson et al. An inference procedure for the HDP-HLM is derived using the blocked Gibbs sampler originally proposed for the HDP-HSMM. This procedure enables the simultaneous and direct inference of language and acoustic models from continuous speech signals. Based on the HDP-HLM and its inference procedure, we developed a novel double articulation analyzer. By assuming HDP-HLM as a generative model of observed time series data, and by inferring latent variables of the model, the method can analyze latent double articulation structure, i.e., hierarchically organized latent words and phonemes, of the data in an unsupervised manner. The novel unsupervised double articulation analyzer is called NPB-DAA. The NPB-DAA can automatically estimate double articulation structure embedded in speech signals. We also carried out two evaluation experiments using synthetic data and actual human continuous speech signals representing Japanese vowel sequences. In the word acquisition and phoneme categorization tasks, the NPB-DAA outperformed a conventional double articulation analyzer (DAA) and baseline automatic speech recognition system whose acoustic model was trained in a supervised manner. |
More Industry-friendly: Federated Learning with High Efficient Design | Although many achievements have been made since Google threw out the paradigm of federated learning (FL), there still exists much room for researchers to optimize its efficiency. In this paper, we propose a high efficient FL method equipped with the double head design aiming for personalization optimization over non-IID dataset, and the gradual model sharing design for communication saving. Experimental results show that, our method has more stable accuracy performance and better communication efficient across various data distributions than other state of art methods (SOTAs), makes it more industry-friendly. |
Pioneer Networks: Progressively Growing Generative Autoencoder | We introduce a novel generative autoencoder network model that learns to encode and reconstruct images with high quality and resolution, and supports smooth random sampling from the latent space of the encoder. Generative adversarial networks (GANs) are known for their ability to simulate random high-quality images, but they cannot reconstruct existing images. Previous works have attempted to extend GANs to support such inference but, so far, have not delivered satisfactory high-quality results. Instead, we propose the Progressively Growing Generative Autoencoder (PIONEER) network which achieves high-quality reconstruction with $128{\times}128$ images without requiring a GAN discriminator. We merge recent techniques for progressively building up the parts of the network with the recently introduced adversarial encoder-generator network. The ability to reconstruct input images is crucial in many real-world applications, and allows for precise intelligent manipulation of existing images. We show promising results in image synthesis and inference, with state-of-the-art results in CelebA inference tasks. |
Contrastive Explanations with Local Foil Trees | Recent advances in interpretable Machine Learning (iML) and eXplainable AI (XAI) construct explanations based on the importance of features in classification tasks. However, in a high-dimensional feature space this approach may become unfeasible without restraining the set of important features. We propose to utilize the human tendency to ask questions like "Why this output (the fact) instead of that output (the foil)?" to reduce the number of features to those that play a main role in the asked contrast. Our proposed method utilizes locally trained one-versus-all decision trees to identify the disjoint set of rules that causes the tree to classify data points as the foil and not as the fact. In this study we illustrate this approach on three benchmark classification tasks. |
Smooth Loss Functions for Deep Top-k Classification | The top-k error is a common measure of performance in machine learning and computer vision. In practice, top-k classification is typically performed with deep neural networks trained with the cross-entropy loss. Theoretical results indeed suggest that cross-entropy is an optimal learning objective for such a task in the limit of infinite data. In the context of limited and noisy data however, the use of a loss function that is specifically designed for top-k classification can bring significant improvements. Our empirical evidence suggests that the loss function must be smooth and have non-sparse gradients in order to work well with deep neural networks. Consequently, we introduce a family of smoothed loss functions that are suited to top-k optimization via deep learning. The widely used cross-entropy is a special case of our family. Evaluating our smooth loss functions is computationally challenging: a na\"ive algorithm would require $\mathcal{O}(\binom{n}{k})$ operations, where n is the number of classes. Thanks to a connection to polynomial algebra and a divide-and-conquer approach, we provide an algorithm with a time complexity of $\mathcal{O}(k n)$. Furthermore, we present a novel approximation to obtain fast and stable algorithms on GPUs with single floating point precision. We compare the performance of the cross-entropy loss and our margin-based losses in various regimes of noise and data size, for the predominant use case of k=5. Our investigation reveals that our loss is more robust to noise and overfitting than cross-entropy. |
Extrapolation for Large-batch Training in Deep Learning | Deep learning networks are typically trained by Stochastic Gradient Descent (SGD) methods that iteratively improve the model parameters by estimating a gradient on a very small fraction of the training data. A major roadblock faced when increasing the batch size to a substantial fraction of the training data for improving training time is the persistent degradation in performance (generalization gap). To address this issue, recent work propose to add small perturbations to the model parameters when computing the stochastic gradients and report improved generalization performance due to smoothing effects. However, this approach is poorly understood; it requires often model-specific noise and fine-tuning. To alleviate these drawbacks, we propose to use instead computationally efficient extrapolation (extragradient) to stabilize the optimization trajectory while still benefiting from smoothing to avoid sharp minima. This principled approach is well grounded from an optimization perspective and we show that a host of variations can be covered in a unified framework that we propose. We prove the convergence of this novel scheme and rigorously evaluate its empirical performance on ResNet, LSTM, and Transformer. We demonstrate that in a variety of experiments the scheme allows scaling to much larger batch sizes than before whilst reaching or surpassing SOTA accuracy. |
Neural collaborative filtering for unsupervised mitral valve segmentation in echocardiography | The segmentation of the mitral valve annulus and leaflets specifies a crucial first step to establish a machine learning pipeline that can support physicians in performing multiple tasks, e.g.\ diagnosis of mitral valve diseases, surgical planning, and intraoperative procedures. Current methods for mitral valve segmentation on 2D echocardiography videos require extensive interaction with annotators and perform poorly on low-quality and noisy videos. We propose an automated and unsupervised method for the mitral valve segmentation based on a low dimensional embedding of the echocardiography videos using neural network collaborative filtering. The method is evaluated in a collection of echocardiography videos of patients with a variety of mitral valve diseases, and additionally on an independent test cohort. It outperforms state-of-the-art \emph{unsupervised} and \emph{supervised} methods on low-quality videos or in the case of sparse annotation. |
Conditional Inference in Pre-trained Variational Autoencoders via Cross-coding | Variational Autoencoders (VAEs) are a popular generative model, but one in which conditional inference can be challenging. If the decomposition into query and evidence variables is fixed, conditional VAEs provide an attractive solution. To support arbitrary queries, one is generally reduced to Markov Chain Monte Carlo sampling methods that can suffer from long mixing times. In this paper, we propose an idea we term cross-coding to approximate the distribution over the latent variables after conditioning on an evidence assignment to some subset of the variables. This allows generating query samples without retraining the full VAE. We experimentally evaluate three variations of cross-coding showing that (i) they can be quickly optimized for different decompositions of evidence and query and (ii) they quantitatively and qualitatively outperform Hamiltonian Monte Carlo. |
Independence Promoted Graph Disentangled Networks | We address the problem of disentangled representation learning with independent latent factors in graph convolutional networks (GCNs). The current methods usually learn node representation by describing its neighborhood as a perceptual whole in a holistic manner while ignoring the entanglement of the latent factors. However, a real-world graph is formed by the complex interaction of many latent factors (e.g., the same hobby, education or work in social network). While little effort has been made toward exploring the disentangled representation in GCNs. In this paper, we propose a novel Independence Promoted Graph Disentangled Networks (IPGDN) to learn disentangled node representation while enhancing the independence among node representations. In particular, we firstly present disentangled representation learning by neighborhood routing mechanism, and then employ the Hilbert-Schmidt Independence Criterion (HSIC) to enforce independence between the latent representations, which is effectively integrated into a graph convolutional framework as a regularizer at the output layer. Experimental studies on real-world graphs validate our model and demonstrate that our algorithms outperform the state-of-the-arts by a wide margin in different network applications, including semi-supervised graph classification, graph clustering and graph visualization. |
A note on stabilizing reinforcement learning | Reinforcement learning is a general methodology of adaptive optimal control that has attracted much attention in various fields ranging from video game industry to robot manipulators. Despite its remarkable performance demonstrations, plain reinforcement learning controllers do not guarantee stability which compromises their applicability in industry. To provide such guarantees, measures have to be taken. This gives rise to what could generally be called stabilizing reinforcement learning. Concrete approaches range from employment of human overseers to filter out unsafe actions to formally verified shields and fusion with classical stabilizing controllers. A line of attack that utilizes elements of adaptive control has become fairly popular in the recent years. In this note, we critically address such an approach in a fairly general actor-critic setup for nonlinear time-continuous environments. The actor network utilizes a so-called robustifying term that is supposed to compensate for the neural network errors. The corresponding stability analysis is based on the value function itself. We indicate a problem in such a stability analysis and provide a counterexample to the overall control scheme. Implications for such a line of attack in stabilizing reinforcement learning are discussed. Furthermore, unfortunately the said problem possess no fix without a substantial reconsideration of the whole approach. As a positive message, we derive a stochastic critic neural network weight convergence analysis provided that the environment was stabilized. |
Temporal Prediction and Evaluation of Brassica Growth in the Field using Conditional Generative Adversarial Networks | Farmers frequently assess plant growth and performance as basis for making decisions when to take action in the field, such as fertilization, weed control, or harvesting. The prediction of plant growth is a major challenge, as it is affected by numerous and highly variable environmental factors. This paper proposes a novel monitoring approach that comprises high-throughput imaging sensor measurements and their automatic analysis to predict future plant growth. Our approach's core is a novel machine learning-based generative growth model based on conditional generative adversarial networks, which is able to predict the future appearance of individual plants. In experiments with RGB time-series images of laboratory-grown Arabidopsis thaliana and field-grown cauliflower plants, we show that our approach produces realistic, reliable, and reasonable images of future growth stages. The automatic interpretation of the generated images through neural network-based instance segmentation allows the derivation of various phenotypic traits that describe plant growth. |
Unsupervised Learning of Disentangled and Interpretable Representations from Sequential Data | We present a factorized hierarchical variational autoencoder, which learns disentangled and interpretable representations from sequential data without supervision. Specifically, we exploit the multi-scale nature of information in sequential data by formulating it explicitly within a factorized hierarchical graphical model that imposes sequence-dependent priors and sequence-independent priors to different sets of latent variables. The model is evaluated on two speech corpora to demonstrate, qualitatively, its ability to transform speakers or linguistic content by manipulating different sets of latent variables; and quantitatively, its ability to outperform an i-vector baseline for speaker verification and reduce the word error rate by as much as 35% in mismatched train/test scenarios for automatic speech recognition tasks. |
Text-based depression detection on sparse data | Previous text-based depression detection is commonly based on large user-generated data. Sparse scenarios like clinical conversations are less investigated. This work proposes a text-based multi-task BGRU network with pretrained word embeddings to model patients' responses during clinical interviews. Our main approach uses a novel multi-task loss function, aiming at modeling both depression severity and binary health state. We independently investigate word- and sentence-level word-embeddings as well as the use of large-data pretraining for depression detection. To strengthen our findings, we report mean-averaged results for a multitude of independent runs on sparse data. First, we show that pretraining is helpful for word-level text-based depression detection. Second, our results demonstrate that sentence-level word-embeddings should be mostly preferred over word-level ones. While the choice of pooling function is less crucial, mean and attention pooling should be preferred over last-timestep pooling. Our method outputs depression presence results as well as predicted severity score, culminating a macro F1 score of 0.84 and MAE of 3.48 on the DAIC-WOZ development set. |
Shift-Robust GNNs: Overcoming the Limitations of Localized Graph Training Data | There has been a recent surge of interest in designing Graph Neural Networks (GNNs) for semi-supervised learning tasks. Unfortunately this work has assumed that the nodes labeled for use in training were selected uniformly at random (i.e. are an IID sample). However in many real world scenarios gathering labels for graph nodes is both expensive and inherently biased -- so this assumption can not be met. GNNs can suffer poor generalization when this occurs, by overfitting to superfluous regularities present in the training data. In this work we present a method, Shift-Robust GNN (SR-GNN), designed to account for distributional differences between biased training data and the graph's true inference distribution. SR-GNN adapts GNN models for the presence of distributional shifts between the nodes which have had labels provided for training and the rest of the dataset. We illustrate the effectiveness of SR-GNN in a variety of experiments with biased training datasets on common GNN benchmark datasets for semi-supervised learning, where we see that SR-GNN outperforms other GNN baselines by accuracy, eliminating at least (~40%) of the negative effects introduced by biased training data. On the largest dataset we consider, ogb-arxiv, we observe an 2% absolute improvement over the baseline and reduce 30% of the negative effects. |
Traffic data reconstruction based on Markov random field modeling | We consider the traffic data reconstruction problem. Suppose we have the traffic data of an entire city that are incomplete because some road data are unobserved. The problem is to reconstruct the unobserved parts of the data. In this paper, we propose a new method to reconstruct incomplete traffic data collected from various traffic sensors. Our approach is based on Markov random field modeling of road traffic. The reconstruction is achieved by using mean-field method and a machine learning method. We numerically verify the performance of our method using realistic simulated traffic data for the real road network of Sendai, Japan. |
Declarative Approaches to Counterfactual Explanations for Classification | We propose answer-set programs that specify and compute counterfactual interventions on entities that are input on a classification model. In relation to the outcome of the model, the resulting counterfactual entities serve as a basis for the definition and computation of causality-based explanation scores for the feature values in the entity under classification, namely "responsibility scores". The approach and the programs can be applied with black-box models, and also with models that can be specified as logic programs, such as rule-based classifiers. The main focus of this work is on the specification and computation of "best" counterfactual entities, i.e. those that lead to maximum responsibility scores. From them one can read off the explanations as maximum responsibility feature values in the original entity. We also extend the programs to bring into the picture semantic or domain knowledge. We show how the approach could be extended by means of probabilistic methods, and how the underlying probability distributions could be modified through the use of constraints. Several examples of programs written in the syntax of the DLV ASP-solver, and run with it, are shown. |
Contrastive analysis for scatterplot-based representations of dimensionality reduction | Cluster interpretation after dimensionality reduction (DR) is a ubiquitous part of exploring multidimensional datasets. DR results are frequently represented by scatterplots, where spatial proximity encodes similarity among data samples. In the literature, techniques support the understanding of scatterplots' organization by visualizing the importance of the features for cluster definition with layout enrichment strategies. However, current approaches usually focus on global information, hampering the analysis whenever the focus is to understand the differences among clusters. Thus, this paper introduces a methodology to visually explore DR results and interpret clusters' formation based on contrastive analysis. We also introduce a bipartite graph to visually interpret and explore the relationship between the statistical variables employed to understand how the data features influence cluster formation. Our approach is demonstrated through case studies, in which we explore two document collections related to news articles and tweets about COVID-19 symptoms. Finally, we evaluate our approach through quantitative results to demonstrate its robustness to support multidimensional analysis. |
Linear convergence of a policy gradient method for finite horizon continuous time stochastic control problems | Despite its popularity in the reinforcement learning community, a provably convergent policy gradient method for general continuous space-time stochastic control problems has been elusive. This paper closes the gap by proposing a proximal gradient algorithm for feedback controls of finite-time horizon stochastic control problems. The state dynamics are continuous time nonlinear diffusions with controlled drift and possibly degenerate noise, and the objectives are nonconvex in the state and nonsmooth in the control. We prove under suitable conditions that the algorithm converges linearly to a stationary point of the control problem, and is stable with respect to policy updates by approximate gradient steps. The convergence result justifies the recent reinforcement learning heuristics that adding entropy regularization or a fictitious discount factor to the optimization objective accelerates the convergence of policy gradient methods. The proof exploits careful regularity estimates of backward stochastic differential equations. |
Metric Entropy Limits on Recurrent Neural Network Learning of Linear Dynamical Systems | One of the most influential results in neural network theory is the universal approximation theorem [1, 2, 3] which states that continuous functions can be approximated to within arbitrary accuracy by single-hidden-layer feedforward neural networks. The purpose of this paper is to establish a result in this spirit for the approximation of general discrete-time linear dynamical systems - including time-varying systems - by recurrent neural networks (RNNs). For the subclass of linear time-invariant (LTI) systems, we devise a quantitative version of this statement. Specifically, measuring the complexity of the considered class of LTI systems through metric entropy according to [4], we show that RNNs can optimally learn - or identify in system-theory parlance - stable LTI systems. For LTI systems whose input-output relation is characterized through a difference equation, this means that RNNs can learn the difference equation from input-output traces in a metric-entropy optimal manner. |
Progressive Neural Image Compression with Nested Quantization and Latent Ordering | We present PLONQ, a progressive neural image compression scheme which pushes the boundary of variable bitrate compression by allowing quality scalable coding with a single bitstream. In contrast to existing learned variable bitrate solutions which produce separate bitstreams for each quality, it enables easier rate-control and requires less storage. Leveraging the latent scaling based variable bitrate solution, we introduce nested quantization, a method that defines multiple quantization levels with nested quantization grids, and progressively refines all latents from the coarsest to the finest quantization level. To achieve finer progressiveness in between any two quantization levels, latent elements are incrementally refined with an importance ordering defined in the rate-distortion sense. To the best of our knowledge, PLONQ is the first learning-based progressive image coding scheme and it outperforms SPIHT, a well-known wavelet-based progressive image codec. |
Square Deal: Lower Bounds and Improved Relaxations for Tensor Recovery | Recovering a low-rank tensor from incomplete information is a recurring problem in signal processing and machine learning. The most popular convex relaxation of this problem minimizes the sum of the nuclear norms of the unfoldings of the tensor. We show that this approach can be substantially suboptimal: reliably recovering a $K$-way tensor of length $n$ and Tucker rank $r$ from Gaussian measurements requires $\Omega(r n^{K-1})$ observations. In contrast, a certain (intractable) nonconvex formulation needs only $O(r^K + nrK)$ observations. We introduce a very simple, new convex relaxation, which partially bridges this gap. Our new formulation succeeds with $O(r^{\lfloor K/2 \rfloor}n^{\lceil K/2 \rceil})$ observations. While these results pertain to Gaussian measurements, simulations strongly suggest that the new norm also outperforms the sum of nuclear norms for tensor completion from a random subset of entries. Our lower bound for the sum-of-nuclear-norms model follows from a new result on recovering signals with multiple sparse structures (e.g. sparse, low rank), which perhaps surprisingly demonstrates the significant suboptimality of the commonly used recovery approach via minimizing the sum of individual sparsity inducing norms (e.g. $l_1$, nuclear norm). Our new formulation for low-rank tensor recovery however opens the possibility in reducing the sample complexity by exploiting several structures jointly. |
On Gap-dependent Bounds for Offline Reinforcement Learning | This paper presents a systematic study on gap-dependent sample complexity in offline reinforcement learning. Prior work showed when the density ratio between an optimal policy and the behavior policy is upper bounded (the optimal policy coverage assumption), then the agent can achieve an $O\left(\frac{1}{\epsilon^2}\right)$ rate, which is also minimax optimal. We show under the optimal policy coverage assumption, the rate can be improved to $O\left(\frac{1}{\epsilon}\right)$ when there is a positive sub-optimality gap in the optimal $Q$-function. Furthermore, we show when the visitation probabilities of the behavior policy are uniformly lower bounded for states where an optimal policy's visitation probabilities are positive (the uniform optimal policy coverage assumption), the sample complexity of identifying an optimal policy is independent of $\frac{1}{\epsilon}$. Lastly, we present nearly-matching lower bounds to complement our gap-dependent upper bounds. |
ELUDE: Generating interpretable explanations via a decomposition into labelled and unlabelled features | Deep learning models have achieved remarkable success in different areas of machine learning over the past decade; however, the size and complexity of these models make them difficult to understand. In an effort to make them more interpretable, several recent works focus on explaining parts of a deep neural network through human-interpretable, semantic attributes. However, it may be impossible to completely explain complex models using only semantic attributes. In this work, we propose to augment these attributes with a small set of uninterpretable features. Specifically, we develop a novel explanation framework ELUDE (Explanation via Labelled and Unlabelled DEcomposition) that decomposes a model's prediction into two parts: one that is explainable through a linear combination of the semantic attributes, and another that is dependent on the set of uninterpretable features. By identifying the latter, we are able to analyze the "unexplained" portion of the model, obtaining insights into the information used by the model. We show that the set of unlabelled features can generalize to multiple models trained with the same feature space and compare our work to two popular attribute-oriented methods, Interpretable Basis Decomposition and Concept Bottleneck, and discuss the additional insights ELUDE provides. |
Federated Anomaly Detection over Distributed Data Streams | Sharing of telecommunication network data, for example, even at high aggregation levels, is nowadays highly restricted due to privacy legislation and regulations and other important ethical concerns. It leads to scattering data across institutions, regions, and states, inhibiting the usage of AI methods that could otherwise take advantage of data at scale. It creates the need to build a platform to control such data, build models or perform calculations. In this work, we propose an approach to building the bridge among anomaly detection, federated learning, and data streams. The overarching goal of the work is to detect anomalies in a federated environment over distributed data streams. This work complements the state-of-the-art by adapting the data stream algorithms in a federated learning setting for anomaly detection and by delivering a robust framework and demonstrating the practical feasibility in a real-world distributed deployment scenario. |
Low Level Control of a Quadrotor with Deep Model-Based Reinforcement Learning | Designing effective low-level robot controllers often entail platform-specific implementations that require manual heuristic parameter tuning, significant system knowledge, or long design times. With the rising number of robotic and mechatronic systems deployed across areas ranging from industrial automation to intelligent toys, the need for a general approach to generating low-level controllers is increasing. To address the challenge of rapidly generating low-level controllers, we argue for using model-based reinforcement learning (MBRL) trained on relatively small amounts of automatically generated (i.e., without system simulation) data. In this paper, we explore the capabilities of MBRL on a Crazyflie centimeter-scale quadrotor with rapid dynamics to predict and control at <50Hz. To our knowledge, this is the first use of MBRL for controlled hover of a quadrotor using only on-board sensors, direct motor input signals, and no initial dynamics knowledge. Our controller leverages rapid simulation of a neural network forward dynamics model on a GPU-enabled base station, which then transmits the best current action to the quadrotor firmware via radio. In our experiments, the quadrotor achieved hovering capability of up to 6 seconds with 3 minutes of experimental training data. |
Characterization of the Variation Spaces Corresponding to Shallow Neural Networks | We study the variation space corresponding to a dictionary of functions in $L^2(\Omega)$ for a bounded domain $\Omega\subset \mathbb{R}^d$. Specifically, we compare the variation space, which is defined in terms of a convex hull with related notions based on integral representations. This allows us to show that three important notions relating to the approximation theory of shallow neural networks, the Barron space, the spectral Barron space, and the Radon BV space, are actually variation spaces with respect to certain natural dictionaries. |
An Interpretable Model with Globally Consistent Explanations for Credit Risk | We propose a possible solution to a public challenge posed by the Fair Isaac Corporation (FICO), which is to provide an explainable model for credit risk assessment. Rather than present a black box model and explain it afterwards, we provide a globally interpretable model that is as accurate as other neural networks. Our "two-layer additive risk model" is decomposable into subscales, where each node in the second layer represents a meaningful subscale, and all of the nonlinearities are transparent. We provide three types of explanations that are simpler than, but consistent with, the global model. One of these explanation methods involves solving a minimum set cover problem to find high-support globally-consistent explanations. We present a new online visualization tool to allow users to explore the global model and its explanations. |
On the Distinction Between "Conditional Average Treatment Effects" (CATE) and "Individual Treatment Effects" (ITE) Under Ignorability Assumptions | Recent years have seen a swell in methods that focus on estimating "individual treatment effects". These methods are often focused on the estimation of heterogeneous treatment effects under ignorability assumptions. This paper hopes to draw attention to the fact that there is nothing necessarily "individual" about such effects under ignorability assumptions and isolating individual effects may require additional assumptions. Such individual effects, more often than not, are more precisely described as "conditional average treatment effects" and confusion between the two has the potential to hinder advances in personalized and individualized effect estimation. |
Communication Efficient Federated Learning over Multiple Access Channels | In this work, we study the problem of federated learning (FL), where distributed users aim to jointly train a machine learning model with the help of a parameter server (PS). In each iteration of FL, users compute local gradients, followed by transmission of the quantized gradients for subsequent aggregation and model updates at PS. One of the challenges of FL is that of communication overhead due to FL's iterative nature and large model sizes. One recent direction to alleviate communication bottleneck in FL is to let users communicate simultaneously over a multiple access channel (MAC), possibly making better use of the communication resources. In this paper, we consider the problem of FL learning over a MAC. In particular, we focus on the design of digital gradient transmission schemes over a MAC, where gradients at each user are first quantized, and then transmitted over a MAC to be decoded individually at the PS. When designing digital FL schemes over MACs, there are new opportunities to assign different amount of resources (such as rate or bandwidth) to different users based on a) the informativeness of the gradients at each user, and b) the underlying channel conditions. We propose a stochastic gradient quantization scheme, where the quantization parameters are optimized based on the capacity region of the MAC. We show that such channel aware quantization for FL outperforms uniform quantization, particularly when users experience different channel conditions, and when have gradients with varying levels of informativeness. |
Learngene: From Open-World to Your Learning Task | Although deep learning has made significant progress on fixed large-scale datasets, it typically encounters challenges regarding improperly detecting unknown/unseen classes in the open-world scenario, over-parametrized, and overfitting small samples. Since biological systems can overcome the above difficulties very well, individuals inherit an innate gene from collective creatures that have evolved over hundreds of millions of years and then learn new skills through few examples. Inspired by this, we propose a practical collective-individual paradigm where an evolution (expandable) network is trained on sequential tasks and then recognize unknown classes in real-world. Moreover, the learngene, i.e., the gene for learning initialization rules of the target model, is proposed to inherit the meta-knowledge from the collective model and reconstruct a lightweight individual model on the target task. Particularly, a novel criterion is proposed to discover learngene in the collective model, according to the gradient information. Finally, the individual model is trained only with few samples on the target learning tasks. We demonstrate the effectiveness of our approach in an extensive empirical study and theoretical analysis. |
DPatch: An Adversarial Patch Attack on Object Detectors | Object detectors have emerged as an indispensable module in modern computer vision systems. In this work, we propose DPatch -- a black-box adversarial-patch-based attack towards mainstream object detectors (i.e. Faster R-CNN and YOLO). Unlike the original adversarial patch that only manipulates image-level classifier, our DPatch simultaneously attacks the bounding box regression and object classification so as to disable their predictions. Compared to prior works, DPatch has several appealing properties: (1) DPatch can perform both untargeted and targeted effective attacks, degrading the mAP of Faster R-CNN and YOLO from 75.10% and 65.7% down to below 1%, respectively. (2) DPatch is small in size and its attacking effect is location-independent, making it very practical to implement real-world attacks. (3) DPatch demonstrates great transferability among different detectors as well as training datasets. For example, DPatch that is trained on Faster R-CNN can effectively attack YOLO, and vice versa. Extensive evaluations imply that DPatch can perform effective attacks under black-box setup, i.e., even without the knowledge of the attacked network's architectures and parameters. Successful realization of DPatch also illustrates the intrinsic vulnerability of the modern detector architectures to such patch-based adversarial attacks. |
ODVICE: An Ontology-Driven Visual Analytic Tool for Interactive Cohort Extraction | Increased availability of electronic health records (EHR) has enabled researchers to study various medical questions. Cohort selection for the hypothesis under investigation is one of the main consideration for EHR analysis. For uncommon diseases, cohorts extracted from EHRs contain very limited number of records - hampering the robustness of any analysis. Data augmentation methods have been successfully applied in other domains to address this issue mainly using simulated records. In this paper, we present ODVICE, a data augmentation framework that leverages the medical concept ontology to systematically augment records using a novel ontologically guided Monte-Carlo graph spanning algorithm. The tool allows end users to specify a small set of interactive controls to control the augmentation process. We analyze the importance of ODVICE by conducting studies on MIMIC-III dataset for two learning tasks. Our results demonstrate the predictive performance of ODVICE augmented cohorts, showing ~30% improvement in area under the curve (AUC) over the non-augmented dataset and other data augmentation strategies. |
A Hybrid Quantum-Classical Neural Network Architecture for Binary Classification | Deep learning is one of the most successful and far-reaching strategies used in machine learning today. However, the scale and utility of neural networks is still greatly limited by the current hardware used to train them. These concerns have become increasingly pressing as conventional computers quickly approach physical limitations that will slow performance improvements in years to come. For these reasons, scientists have begun to explore alternative computing platforms, like quantum computers, for training neural networks. In recent years, variational quantum circuits have emerged as one of the most successful approaches to quantum deep learning on noisy intermediate scale quantum devices. We propose a hybrid quantum-classical neural network architecture where each neuron is a variational quantum circuit. We empirically analyze the performance of this hybrid neural network on a series of binary classification data sets using a simulated universal quantum computer and a state of the art universal quantum computer. On simulated hardware, we observe that the hybrid neural network achieves roughly 10% higher classification accuracy and 20% better minimization of cost than an individual variational quantum circuit. On quantum hardware, we observe that each model only performs well when the qubit and gate count is sufficiently small. |
Secure Neuroimaging Analysis using Federated Learning with Homomorphic Encryption | Federated learning (FL) enables distributed computation of machine learning models over various disparate, remote data sources, without requiring to transfer any individual data to a centralized location. This results in an improved generalizability of models and efficient scaling of computation as more sources and larger datasets are added to the federation. Nevertheless, recent membership attacks show that private or sensitive personal data can sometimes be leaked or inferred when model parameters or summary statistics are shared with a central site, requiring improved security solutions. In this work, we propose a framework for secure FL using fully-homomorphic encryption (FHE). Specifically, we use the CKKS construction, an approximate, floating point compatible scheme that benefits from ciphertext packing and rescaling. In our evaluation on large-scale brain MRI datasets, we use our proposed secure FL framework to train a deep learning model to predict a person's age from distributed MRI scans, a common benchmarking task, and demonstrate that there is no degradation in the learning performance between the encrypted and non-encrypted federated models. |
MetaFed: Federated Learning among Federations with Cyclic Knowledge Distillation for Personalized Healthcare | Federated learning has attracted increasing attention to building models without accessing the raw user data, especially in healthcare. In real applications, different federations can seldom work together due to possible reasons such as data heterogeneity and distrust/inexistence of the central server. In this paper, we propose a novel framework called MetaFed to facilitate trustworthy FL between different federations. MetaFed obtains a personalized model for each federation without a central server via the proposed Cyclic Knowledge Distillation. Specifically, MetaFed treats each federation as a meta distribution and aggregates knowledge of each federation in a cyclic manner. The training is split into two parts: common knowledge accumulation and personalization. Comprehensive experiments on three benchmarks demonstrate that MetaFed without a server achieves better accuracy compared to state-of-the-art methods (e.g., 10%+ accuracy improvement compared to the baseline for PAMAP2) with fewer communication costs. |
The Effect of Communication on Noncooperative Multiplayer Multi-Armed Bandit Problems | We consider decentralized stochastic multi-armed bandit problem with multiple players in the case of different communication probabilities between players. Each player makes a decision of pulling an arm without cooperation while aiming to maximize his or her reward but informs his or her neighbors in the end of every turn about the arm he or she pulled and the reward he or she got. Neighbors of players are determined according to an Erdos-Renyi graph with which is reproduced in the beginning of every turn. We consider i.i.d. rewards generated by a Bernoulli distribution and assume that players are unaware about the arms' probability distributions and their mean values. In case of a collision, we assume that only one of the players who is randomly chosen gets the reward where the others get zero reward. We study the effects of connectivity, the degree of communication between players, on the cumulative regret using well-known algorithms UCB1, epsilon-Greedy and Thompson Sampling. |
Block Basis Factorization for Scalable Kernel Matrix Evaluation | Kernel methods are widespread in machine learning; however, they are limited by the quadratic complexity of the construction, application, and storage of kernel matrices. Low-rank matrix approximation algorithms are widely used to address this problem and reduce the arithmetic and storage cost. However, we observed that for some datasets with wide intra-class variability, the optimal kernel parameter for smaller classes yields a matrix that is less well approximated by low-rank methods. In this paper, we propose an efficient structured low-rank approximation method -- the Block Basis Factorization (BBF) -- and its fast construction algorithm to approximate radial basis function (RBF) kernel matrices. Our approach has linear memory cost and floating-point operations for many machine learning kernels. BBF works for a wide range of kernel bandwidth parameters and extends the domain of applicability of low-rank approximation methods significantly. Our empirical results demonstrate the stability and superiority over the state-of-art kernel approximation algorithms. |
Policy Gradient Methods for Reinforcement Learning with Function Approximation and Action-Dependent Baselines | We show how an action-dependent baseline can be used by the policy gradient theorem using function approximation, originally presented with action-independent baselines by (Sutton et al. 2000). |
Time-Contrastive Learning Based Deep Bottleneck Features for Text-Dependent Speaker Verification | There are a number of studies about extraction of bottleneck (BN) features from deep neural networks (DNNs)trained to discriminate speakers, pass-phrases and triphone states for improving the performance of text-dependent speaker verification (TD-SV). However, a moderate success has been achieved. A recent study [1] presented a time contrastive learning (TCL) concept to explore the non-stationarity of brain signals for classification of brain states. Speech signals have similar non-stationarity property, and TCL further has the advantage of having no need for labeled data. We therefore present a TCL based BN feature extraction method. The method uniformly partitions each speech utterance in a training dataset into a predefined number of multi-frame segments. Each segment in an utterance corresponds to one class, and class labels are shared across utterances. DNNs are then trained to discriminate all speech frames among the classes to exploit the temporal structure of speech. In addition, we propose a segment-based unsupervised clustering algorithm to re-assign class labels to the segments. TD-SV experiments were conducted on the RedDots challenge database. The TCL-DNNs were trained using speech data of fixed pass-phrases that were excluded from the TD-SV evaluation set, so the learned features can be considered phrase-independent. We compare the performance of the proposed TCL bottleneck (BN) feature with those of short-time cepstral features and BN features extracted from DNNs discriminating speakers, pass-phrases, speaker+pass-phrase, as well as monophones whose labels and boundaries are generated by three different automatic speech recognition (ASR) systems. Experimental results show that the proposed TCL-BN outperforms cepstral features and speaker+pass-phrase discriminant BN features, and its performance is on par with those of ASR derived BN features. Moreover,.... |
A Spectral Regularizer for Unsupervised Disentanglement | A generative model with a disentangled representation allows for independent control over different aspects of the output. Learning disentangled representations has been a recent topic of great interest, but it remains poorly understood. We show that even for GANs that do not possess disentangled representations, one can find curved trajectories in latent space over which local disentanglement occurs. These trajectories are found by iteratively following the leading right-singular vectors of the Jacobian of the generator with respect to its input. Based on this insight, we describe an efficient regularizer that aligns these vectors with the coordinate axes, and show that it can be used to induce disentangled representations in GANs, in a completely unsupervised manner. |
Integrating Machine Learning with Physics-Based Modeling | Machine learning is poised as a very powerful tool that can drastically improve our ability to carry out scientific research. However, many issues need to be addressed before this becomes a reality. This article focuses on one particular issue of broad interest: How can we integrate machine learning with physics-based modeling to develop new interpretable and truly reliable physical models? After introducing the general guidelines, we discuss the two most important issues for developing machine learning-based physical models: Imposing physical constraints and obtaining optimal datasets. We also provide a simple and intuitive explanation for the fundamental reasons behind the success of modern machine learning, as well as an introduction to the concurrent machine learning framework needed for integrating machine learning with physics-based modeling. Molecular dynamics and moment closure of kinetic equations are used as examples to illustrate the main issues discussed. We end with a general discussion on where this integration will lead us to, and where the new frontier will be after machine learning is successfully integrated into scientific modeling. |
Fashionpedia: Ontology, Segmentation, and an Attribute Localization Dataset | In this work we explore the task of instance segmentation with attribute localization, which unifies instance segmentation (detect and segment each object instance) and fine-grained visual attribute categorization (recognize one or multiple attributes). The proposed task requires both localizing an object and describing its properties. To illustrate the various aspects of this task, we focus on the domain of fashion and introduce Fashionpedia as a step toward mapping out the visual aspects of the fashion world. Fashionpedia consists of two parts: (1) an ontology built by fashion experts containing 27 main apparel categories, 19 apparel parts, 294 fine-grained attributes and their relationships; (2) a dataset with everyday and celebrity event fashion images annotated with segmentation masks and their associated per-mask fine-grained attributes, built upon the Fashionpedia ontology. In order to solve this challenging task, we propose a novel Attribute-Mask RCNN model to jointly perform instance segmentation and localized attribute recognition, and provide a novel evaluation metric for the task. We also demonstrate instance segmentation models pre-trained on Fashionpedia achieve better transfer learning performance on other fashion datasets than ImageNet pre-training. Fashionpedia is available at: https://fashionpedia.github.io/home/index.html. |
SGEITL: Scene Graph Enhanced Image-Text Learning for Visual Commonsense Reasoning | Answering complex questions about images is an ambitious goal for machine intelligence, which requires a joint understanding of images, text, and commonsense knowledge, as well as a strong reasoning ability. Recently, multimodal Transformers have made great progress in the task of Visual Commonsense Reasoning (VCR), by jointly understanding visual objects and text tokens through layers of cross-modality attention. However, these approaches do not utilize the rich structure of the scene and the interactions between objects which are essential in answering complex commonsense questions. We propose a Scene Graph Enhanced Image-Text Learning (SGEITL) framework to incorporate visual scene graphs in commonsense reasoning. To exploit the scene graph structure, at the model structure level, we propose a multihop graph transformer for regularizing attention interaction among hops. As for pre-training, a scene-graph-aware pre-training method is proposed to leverage structure knowledge extracted in the visual scene graph. Moreover, we introduce a method to train and generate domain-relevant visual scene graphs using textual annotations in a weakly-supervised manner. Extensive experiments on VCR and other tasks show a significant performance boost compared with the state-of-the-art methods and prove the efficacy of each proposed component. |
Semi-unsupervised Learning of Human Activity using Deep Generative Models | We introduce 'semi-unsupervised learning', a problem regime related to transfer learning and zero-shot learning where, in the training data, some classes are sparsely labelled and others entirely unlabelled. Models able to learn from training data of this type are potentially of great use as many real-world datasets are like this. Here we demonstrate a new deep generative model for classification in this regime. Our model, a Gaussian mixture deep generative model, demonstrates superior semi-unsupervised classification performance on MNIST to model M2 from Kingma and Welling (2014). We apply the model to human accelerometer data, performing activity classification and structure discovery on windows of time series data. |
Deep Learning Enables Robust and Precise Light Focusing on Treatment Needs | If light passes through the body tissues, focusing only on areas where treatment needs, such as tumors, will revolutionize many biomedical imaging and therapy technologies. So how to focus light through deep inhomogeneous tissues overcoming scattering is Holy Grail in biomedical areas. In this paper, we use deep learning to learn and accelerate the process of phase pre-compensation using wavefront shaping. We present an approach (LoftGAN, light only focuses on treatment needs) for learning the relationship between phase domain X and speckle domain Y . Our goal is not just to learn an inverse mapping F:Y->X such that we can know the corresponding X needed for imaging Y like most work, but also to make focusing that is susceptible to disturbances more robust and precise by ensuring that the phase obtained can be forward mapped back to speckle. So we introduce different constraints to enforce F(Y)=X and H(F(Y))=Y with the transmission mapping H:X->Y. Both simulation and physical experiments are performed to investigate the effects of light focusing to demonstrate the effectiveness of our method and comparative experiments prove the crucial improvement of robustness and precision. Codes are available at https://github.com/ChangchunYang/LoftGAN. |
How Neural Processes Improve Graph Link Prediction | Link prediction is a fundamental problem in graph data analysis. While most of the literature focuses on transductive link prediction that requires all the graph nodes and majority of links in training, inductive link prediction, which only uses a proportion of the nodes and their links in training, is a more challenging problem in various real-world applications. In this paper, we propose a meta-learning approach with graph neural networks for link prediction: Neural Processes for Graph Neural Networks (NPGNN), which can perform both transductive and inductive learning tasks and adapt to patterns in a large new graph after training with a small subgraph. Experiments on real-world graphs are conducted to validate our model, where the results suggest that the proposed method achieves stronger performance compared to other state-of-the-art models, and meanwhile generalizes well when training on a small subgraph. |
Communication-efficient distributed eigenspace estimation with arbitrary node failures | We develop an eigenspace estimation algorithm for distributed environments with arbitrary node failures, where a subset of computing nodes can return structurally valid but otherwise arbitrarily chosen responses. Notably, this setting encompasses several important scenarios that arise in distributed computing and data-collection environments such as silent/soft errors, outliers or corrupted data at certain nodes, and adversarial responses. Our estimator builds upon and matches the performance of a recently proposed non-robust estimator up to an additive $\tilde{O}(\sigma \sqrt{\alpha})$ error, where $\sigma^2$ is the variance of the existing estimator and $\alpha$ is the fraction of corrupted nodes. |
Exploring Student Check-In Behavior for Improved Point-of-Interest Prediction | With the availability of vast amounts of user visitation history on location-based social networks (LBSN), the problem of Point-of-Interest (POI) prediction has been extensively studied. However, much of the research has been conducted solely on voluntary checkin datasets collected from social apps such as Foursquare or Yelp. While these data contain rich information about recreational activities (e.g., restaurants, nightlife, and entertainment), information about more prosaic aspects of people's lives is sparse. This not only limits our understanding of users' daily routines, but more importantly the modeling assumptions developed based on characteristics of recreation-based data may not be suitable for richer check-in data. In this work, we present an analysis of education "check-in" data using WiFi access logs collected at Purdue University. We propose a heterogeneous graph-based method to encode the correlations between users, POIs, and activities, and then jointly learn embeddings for the vertices. We evaluate our method compared to previous state-of-the-art POI prediction methods, and show that the assumptions made by previous methods significantly degrade performance on our data with dense(r) activity signals. We also show how our learned embeddings could be used to identify similar students (e.g., for friend suggestions). |
Encoding Involutory Invariances in Neural Networks | In certain situations, neural networks are trained upon data that obey underlying symmetries. However, the predictions do not respect the symmetries exactly unless embedded in the network structure. In this work, we introduce architectures that embed a special kind of symmetry namely, invariance with respect to involutory linear/affine transformations up to parity $p=\pm 1$. We provide rigorous theorems to show that the proposed network ensures such an invariance and present qualitative arguments for a special universal approximation theorem. An adaption of our techniques to CNN tasks for datasets with inherent horizontal/vertical reflection symmetry is demonstrated. Extensive experiments indicate that the proposed model outperforms baseline feed-forward and physics-informed neural networks while identically respecting the underlying symmetry. |
Evaluating Sparse Interpretable Word Embeddings for Biomedical Domain | Word embeddings have found their way into a wide range of natural language processing tasks including those in the biomedical domain. While these vector representations successfully capture semantic and syntactic word relations, hidden patterns and trends in the data, they fail to offer interpretability. Interpretability is a key means to justification which is an integral part when it comes to biomedical applications. We present an inclusive study on interpretability of word embeddings in the medical domain, focusing on the role of sparse methods. Qualitative and quantitative measurements and metrics for interpretability of word vector representations are provided. For the quantitative evaluation, we introduce an extensive categorized dataset that can be used to quantify interpretability based on category theory. Intrinsic and extrinsic evaluation of the studied methods are also presented. As for the latter, we propose datasets which can be utilized for effective extrinsic evaluation of word vectors in the biomedical domain. Based on our experiments, it is seen that sparse word vectors show far more interpretability while preserving the performance of their original vectors in downstream tasks. |
Reinforcement Learning Based Emotional Editing Constraint Conversation Generation | In recent years, the generation of conversation content based on deep neural networks has attracted many researchers. However, traditional neural language models tend to generate general replies, lacking logical and emotional factors. This paper proposes a conversation content generation model that combines reinforcement learning with emotional editing constraints to generate more meaningful and customizable emotional replies. The model divides the replies into three clauses based on pre-generated keywords and uses the emotional editor to further optimize the final reply. The model combines multi-task learning with multiple indicator rewards to comprehensively optimize the quality of replies. Experiments shows that our model can not only improve the fluency of the replies, but also significantly enhance the logical relevance and emotional relevance of the replies. |
FedPop: A Bayesian Approach for Personalised Federated Learning | Personalised federated learning (FL) aims at collaboratively learning a machine learning model taylored for each client. Albeit promising advances have been made in this direction, most of existing approaches works do not allow for uncertainty quantification which is crucial in many applications. In addition, personalisation in the cross-device setting still involves important issues, especially for new clients or those having small number of observations. This paper aims at filling these gaps. To this end, we propose a novel methodology coined FedPop by recasting personalised FL into the population modeling paradigm where clients' models involve fixed common population parameters and random effects, aiming at explaining data heterogeneity. To derive convergence guarantees for our scheme, we introduce a new class of federated stochastic optimisation algorithms which relies on Markov chain Monte Carlo methods. Compared to existing personalised FL methods, the proposed methodology has important benefits: it is robust to client drift, practical for inference on new clients, and above all, enables uncertainty quantification under mild computational and memory overheads. We provide non-asymptotic convergence guarantees for the proposed algorithms and illustrate their performances on various personalised federated learning tasks. |
Node metadata can produce predictability transitions in network inference problems | Network inference is the process of learning the properties of complex networks from data. Besides using information about known links in the network, node attributes and other forms of network metadata can help to solve network inference problems. Indeed, several approaches have been proposed to introduce metadata into probabilistic network models and to use them to make better inferences. However, we know little about the effect of such metadata in the inference process. Here, we investigate this issue. We find that, rather than affecting inference gradually, adding metadata causes abrupt transitions in the inference process and in our ability to make accurate predictions, from a situation in which metadata does not play any role to a situation in which metadata completely dominates the inference process. When network data and metadata are partly correlated, metadata optimally contributes to the inference process at the transition between data-dominated and metadata-dominated regimes. |
Robustness and Diversity Seeking Data-Free Knowledge Distillation | Knowledge distillation (KD) has enabled remarkable progress in model compression and knowledge transfer. However, KD requires a large volume of original data or their representation statistics that are not usually available in practice. Data-free KD has recently been proposed to resolve this problem, wherein teacher and student models are fed by a synthetic sample generator trained from the teacher. Nonetheless, existing data-free KD methods rely on fine-tuning of weights to balance multiple losses, and ignore the diversity of generated samples, resulting in limited accuracy and robustness. To overcome this challenge, we propose robustness and diversity seeking data-free KD (RDSKD) in this paper. The generator loss function is crafted to produce samples with high authenticity, class diversity, and inter-sample diversity. Without real data, the objectives of seeking high sample authenticity and class diversity often conflict with each other, causing frequent loss fluctuations. We mitigate this by exponentially penalizing loss increments. With MNIST, CIFAR-10, and SVHN datasets, our experiments show that RDSKD achieves higher accuracy with more robustness over different hyperparameter settings, compared to other data-free KD methods such as DAFL, MSKD, ZSKD, and DeepInversion. |
Combined Cleaning and Resampling Algorithm for Multi-Class Imbalanced Data with Label Noise | The imbalanced data classification is one of the most crucial tasks facing modern data analysis. Especially when combined with other difficulty factors, such as the presence of noise, overlapping class distributions, and small disjuncts, data imbalance can significantly impact the classification performance. Furthermore, some of the data difficulty factors are known to affect the performance of the existing oversampling strategies, in particular SMOTE and its derivatives. This effect is especially pronounced in the multi-class setting, in which the mutual imbalance relationships between the classes complicate even further. Despite that, most of the contemporary research in the area of data imbalance focuses on the binary classification problems, while their more difficult multi-class counterparts are relatively unexplored. In this paper, we propose a novel oversampling technique, a Multi-Class Combined Cleaning and Resampling (MC-CCR) algorithm. The proposed method utilizes an energy-based approach to modeling the regions suitable for oversampling, less affected by small disjuncts and outliers than SMOTE. It combines it with a simultaneous cleaning operation, the aim of which is to reduce the effect of overlapping class distributions on the performance of the learning algorithms. Finally, by incorporating a dedicated strategy of handling the multi-class problems, MC-CCR is less affected by the loss of information about the inter-class relationships than the traditional multi-class decomposition strategies. Based on the results of experimental research carried out for many multi-class imbalanced benchmark datasets, the high robust of the proposed approach to noise was shown, as well as its high quality compared to the state-of-art methods. |
Financial Trading Model with Stock Bar Chart Image Time Series with Deep Convolutional Neural Networks | Even though computational intelligence techniques have been extensively utilized in financial trading systems, almost all developed models use the time series data for price prediction or identifying buy-sell points. However, in this study we decided to use 2-D stock bar chart images directly without introducing any additional time series associated with the underlying stock. We propose a novel algorithmic trading model CNN-BI (Convolutional Neural Network with Bar Images) using a 2-D Convolutional Neural Network. We generated 2-D images of sliding windows of 30-day bar charts for Dow 30 stocks and trained a deep Convolutional Neural Network (CNN) model for our algorithmic trading model. We tested our model separately between 2007-2012 and 2012-2017 for representing different market conditions. The results indicate that the model was able to outperform Buy and Hold strategy, especially in trendless or bear markets. Since this is a preliminary study and probably one of the first attempts using such an unconventional approach, there is always potential for improvement. Overall, the results are promising and the model might be integrated as part of an ensemble trading model combined with different strategies. |
More Bang for Your Buck: Natural Perturbation for Robust Question Answering | While recent models have achieved human-level scores on many NLP datasets, we observe that they are considerably sensitive to small changes in input. As an alternative to the standard approach of addressing this issue by constructing training sets of completely new examples, we propose doing so via minimal perturbation of examples. Specifically, our approach involves first collecting a set of seed examples and then applying human-driven natural perturbations (as opposed to rule-based machine perturbations), which often change the gold label as well. Local perturbations have the advantage of being relatively easier (and hence cheaper) to create than writing out completely new examples. To evaluate the impact of this phenomenon, we consider a recent question-answering dataset (BoolQ) and study the benefit of our approach as a function of the perturbation cost ratio, the relative cost of perturbing an existing question vs. creating a new one from scratch. We find that when natural perturbations are moderately cheaper to create, it is more effective to train models using them: such models exhibit higher robustness and better generalization, while retaining performance on the original BoolQ dataset. |
Learning Non-Markovian Quantum Noise from Moir\'{e}-Enhanced Swap Spectroscopy with Deep Evolutionary Algorithm | Two-level-system (TLS) defects in amorphous dielectrics are a major source of noise and decoherence in solid-state qubits. Gate-dependent non-Markovian errors caused by TLS-qubit coupling are detrimental to fault-tolerant quantum computation and have not been rigorously treated in the existing literature. In this work, we derive the non-Markovian dynamics between TLS and qubits during a SWAP-like two-qubit gate and the associated average gate fidelity for frequency-tunable Transmon qubits. This gate dependent error model facilitates using qubits as sensors to simultaneously learn practical imperfections in both the qubit's environment and control waveforms. We combine the-state-of-art machine learning algorithm with Moir\'{e}-enhanced swap spectroscopy to achieve robust learning using noisy experimental data. Deep neural networks are used to represent the functional map from experimental data to TLS parameters and are trained through an evolutionary algorithm. Our method achieves the highest learning efficiency and robustness against experimental imperfections to-date, representing an important step towards in-situ quantum control optimization over environmental and control defects. |
The Prevalence of Errors in Machine Learning Experiments | Context: Conducting experiments is central to research machine learning research to benchmark, evaluate and compare learning algorithms. Consequently it is important we conduct reliable, trustworthy experiments. Objective: We investigate the incidence of errors in a sample of machine learning experiments in the domain of software defect prediction. Our focus is simple arithmetical and statistical errors. Method: We analyse 49 papers describing 2456 individual experimental results from a previously undertaken systematic review comparing supervised and unsupervised defect prediction classifiers. We extract the confusion matrices and test for relevant constraints, e.g., the marginal probabilities must sum to one. We also check for multiple statistical significance testing errors. Results: We find that a total of 22 out of 49 papers contain demonstrable errors. Of these 7 were statistical and 16 related to confusion matrix inconsistency (one paper contained both classes of error). Conclusions: Whilst some errors may be of a relatively trivial nature, e.g., transcription errors their presence does not engender confidence. We strongly urge researchers to follow open science principles so errors can be more easily be detected and corrected, thus as a community reduce this worryingly high error rate with our computational experiments. |
Metaoptimization on a Distributed System for Deep Reinforcement Learning | Training intelligent agents through reinforcement learning is a notoriously unstable procedure. Massive parallelization on GPUs and distributed systems has been exploited to generate a large amount of training experiences and consequently reduce instabilities, but the success of training remains strongly influenced by the choice of the hyperparameters. To overcome this issue, we introduce HyperTrick, a new metaoptimization algorithm, and show its effective application to tune hyperparameters in the case of deep reinforcement learning, while learning to play different Atari games on a distributed system. Our analysis provides evidence of the interaction between the identification of the optimal hyperparameters and the learned policy, that is typical of the case of metaoptimization for deep reinforcement learning. When compared with state-of-the-art metaoptimization algorithms, HyperTrick is characterized by a simpler implementation and it allows learning similar policies, while making a more effective use of the computational resources in a distributed system. |