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Catch pull errors when mirroring so that the script continues to update the other datasets. The error will still be printed at the end of the job. In this case the job also fails, and asks to manually update the datasets that failed.
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Add API code examples for Builder classes
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This PR adds API code examples for the Builder classes.
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added TR-News dataset
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[Imagefolder] Docs + Don't infer labels from file names when there are metadata + Error messages when metadata and images aren't linked correctly
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I updated the `docs/source/image_process.mdx` documentation and added an example for image captioning and object detection using `ImageFolder`. While doing so I also improved a few aspects: - we don't need to infer labels from file names when there are metadata - they can just be in the metadata if necessary - raise informative error messages when metadata and images aren't linked correctly: - when an image is missing a metadata file - when a metadata file is missing an image I added some tests for these changes as well cc @mariosasko
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Loading dataset with streaming: '_io.BufferedReader' object has no attribute 'loc'
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## Describe the bug Loading a datasets with `load_dataset` and `streaming=True` returns `AttributeError: '_io.BufferedReader' object has no attribute 'loc'`. Notice that loading with `streaming=False` works fine. In the following steps we load parquet files but the same happens with pickle files. The problem seems to come from `fsspec` lib, I put in the environment info also `s3fs` and `fsspec` versions since I'm loading from an s3 bucket. ## Steps to reproduce the bug ```python from datasets import load_dataset # path is the path to parquet files data_files = {"train": path + "meta_train.parquet.gzip", "test": path + "meta_test.parquet.gzip"} dataset = load_dataset("parquet", data_files=data_files, streaming=True) ``` ## Expected results A dataset object `datasets.dataset_dict.DatasetDict` ## Actual results ``` AttributeError Traceback (most recent call last) <command-562086> in <module> 11 12 data_files = {"train": path + "meta_train.parquet.gzip", "test": path + "meta_test.parquet.gzip"} ---> 13 dataset = load_dataset("parquet", data_files=data_files, streaming=True) /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/load.py in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, ignore_verifications, keep_in_memory, save_infos, revision, use_auth_token, task, streaming, **config_kwargs) 1679 if streaming: 1680 extend_dataset_builder_for_streaming(builder_instance, use_auth_token=use_auth_token) -> 1681 return builder_instance.as_streaming_dataset( 1682 split=split, 1683 use_auth_token=use_auth_token, /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/builder.py in as_streaming_dataset(self, split, base_path, use_auth_token) 904 ) 905 self._check_manual_download(dl_manager) --> 906 splits_generators = {sg.name: sg for sg in self._split_generators(dl_manager)} 907 # By default, return all splits 908 if split is None: /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/packaged_modules/parquet/parquet.py in _split_generators(self, dl_manager) 30 if not self.config.data_files: 31 raise ValueError(f"At least one data file must be specified, but got data_files={self.config.data_files}") ---> 32 data_files = dl_manager.download_and_extract(self.config.data_files) 33 if isinstance(data_files, (str, list, tuple)): 34 files = data_files /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/utils/streaming_download_manager.py in download_and_extract(self, url_or_urls) 798 799 def download_and_extract(self, url_or_urls): --> 800 return self.extract(self.download(url_or_urls)) 801 802 def iter_archive(self, urlpath_or_buf: Union[str, io.BufferedReader]) -> Iterable[Tuple]: /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/utils/streaming_download_manager.py in extract(self, path_or_paths) 776 777 def extract(self, path_or_paths): --> 778 urlpaths = map_nested(self._extract, path_or_paths, map_tuple=True) 779 return urlpaths 780 /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/utils/py_utils.py in map_nested(function, data_struct, dict_only, map_list, map_tuple, map_numpy, num_proc, types, disable_tqdm, desc) 312 num_proc = 1 313 if num_proc <= 1 or len(iterable) <= num_proc: --> 314 mapped = [ 315 _single_map_nested((function, obj, types, None, True, None)) 316 for obj in logging.tqdm(iterable, disable=disable_tqdm, desc=desc) /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/utils/py_utils.py in <listcomp>(.0) 313 if num_proc <= 1 or len(iterable) <= num_proc: 314 mapped = [ --> 315 _single_map_nested((function, obj, types, None, True, None)) 316 for obj in logging.tqdm(iterable, disable=disable_tqdm, desc=desc) 317 ] /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/utils/py_utils.py in _single_map_nested(args) 267 return {k: _single_map_nested((function, v, types, None, True, None)) for k, v in pbar} 268 else: --> 269 mapped = [_single_map_nested((function, v, types, None, True, None)) for v in pbar] 270 if isinstance(data_struct, list): 271 return mapped /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/utils/py_utils.py in <listcomp>(.0) 267 return {k: _single_map_nested((function, v, types, None, True, None)) for k, v in pbar} 268 else: --> 269 mapped = [_single_map_nested((function, v, types, None, True, None)) for v in pbar] 270 if isinstance(data_struct, list): 271 return mapped /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/utils/py_utils.py in _single_map_nested(args) 249 # Singleton first to spare some computation 250 if not isinstance(data_struct, dict) and not isinstance(data_struct, types): --> 251 return function(data_struct) 252 253 # Reduce logging to keep things readable in multiprocessing with tqdm /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/utils/streaming_download_manager.py in _extract(self, urlpath) 781 def _extract(self, urlpath: str) -> str: 782 urlpath = str(urlpath) --> 783 protocol = _get_extraction_protocol(urlpath, use_auth_token=self.download_config.use_auth_token) 784 if protocol is None: 785 # no extraction /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/utils/streaming_download_manager.py in _get_extraction_protocol(urlpath, use_auth_token) 371 urlpath, kwargs = urlpath, {} 372 with fsspec.open(urlpath, **kwargs) as f: --> 373 return _get_extraction_protocol_with_magic_number(f) 374 375 /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/datasets/utils/streaming_download_manager.py in _get_extraction_protocol_with_magic_number(f) 335 def _get_extraction_protocol_with_magic_number(f) -> Optional[str]: 336 """read the magic number from a file-like object and return the compression protocol""" --> 337 prev_loc = f.loc 338 magic_number = f.read(MAGIC_NUMBER_MAX_LENGTH) 339 f.seek(prev_loc) /local_disk0/.ephemeral_nfs/envs/pythonEnv-a7e72260-221c-472b-85f4-bec801aee66d/lib/python3.8/site-packages/fsspec/implementations/local.py in __getattr__(self, item) 337 338 def __getattr__(self, item): --> 339 return getattr(self.f, item) 340 341 def __enter__(self): AttributeError: '_io.BufferedReader' object has no attribute 'loc' ``` ## Environment info - `datasets` version: 2.1.0 - Platform: Linux-5.4.0-1071-aws-x86_64-with-glibc2.29 - Python version: 3.8.10 - PyArrow version: 8.0.0 - Pandas version: 1.4.2 - `fsspec` version: 2021.08.1 - `s3fs` version: 2021.08.1
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[WIP] Add TEDLIUM dataset
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Adds the TED-LIUM dataset https://www.tensorflow.org/datasets/catalog/tedlium#tedliumrelease3 TODO: - [x] Port `tedium.py` from TF datasets using `convert_dataset.sh` script - [ ] Make `load_dataset` work - [ ] Run `datasets-cli` command to generate `dataset_infos.json` - [ ] Create dummy data for continuous testing - [ ] Dummy data tests - [ ] Real data tests - [ ] Create the metadata JSON - [ ] Close PR and add directly to the Hub under LIUM org
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Remove unused multiprocessing args from test CLI
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Multiprocessing is not used in the test CLI.
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Add packaged builder configs to the documentation
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Add the packaged builders configurations to the docs reference is useful to show the list of all parameters one can use when loading data in many formats: CSV, JSON, etc.
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`load_dataset` does not work with certain filename.
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## Describe the bug This is a weird bug that took me some time to find out. I have a JSON dataset that I want to load with `load_dataset` like this: ``` data_files = dict(train="train.json.zip", val="val.json.zip") dataset = load_dataset("json", data_files=data_files, field="data") ``` ## Expected results No error. ## Actual results The val file is loaded as expected, but the train file throws JSON decoding error: ``` ╭──────────────────────────── Traceback (most recent call last) ────────────────────────────╮ │ <ipython-input-74-97947e92c100>:5 in <module> │ │ │ │ /home/tiankang/software/anaconda3/lib/python3.8/site-packages/datasets/load.py:1687 in │ │ load_dataset │ │ │ │ 1684 │ try_from_hf_gcs = path not in _PACKAGED_DATASETS_MODULES │ │ 1685 │ │ │ 1686 │ # Download and prepare data │ │ ❱ 1687 │ builder_instance.download_and_prepare( │ │ 1688 │ │ download_config=download_config, │ │ 1689 │ │ download_mode=download_mode, │ │ 1690 │ │ ignore_verifications=ignore_verifications, │ │ │ │ /home/tiankang/software/anaconda3/lib/python3.8/site-packages/datasets/builder.py:605 in │ │ download_and_prepare │ │ │ │ 602 │ │ │ │ │ │ except ConnectionError: │ │ 603 │ │ │ │ │ │ │ logger.warning("HF google storage unreachable. Downloa │ │ 604 │ │ │ │ │ if not downloaded_from_gcs: │ │ ❱ 605 │ │ │ │ │ │ self._download_and_prepare( │ │ 606 │ │ │ │ │ │ │ dl_manager=dl_manager, verify_infos=verify_infos, **do │ │ 607 │ │ │ │ │ │ ) │ │ 608 │ │ │ │ │ # Sync info │ │ │ │ /home/tiankang/software/anaconda3/lib/python3.8/site-packages/datasets/builder.py:694 in │ │ _download_and_prepare │ │ │ │ 691 │ │ │ │ │ 692 │ │ │ try: │ │ 693 │ │ │ │ # Prepare split will record examples associated to the split │ │ ❱ 694 │ │ │ │ self._prepare_split(split_generator, **prepare_split_kwargs) │ │ 695 │ │ │ except OSError as e: │ │ 696 │ │ │ │ raise OSError( │ │ 697 │ │ │ │ │ "Cannot find data file. " │ │ │ │ /home/tiankang/software/anaconda3/lib/python3.8/site-packages/datasets/builder.py:1151 in │ │ _prepare_split │ │ │ │ 1148 │ │ │ │ 1149 │ │ generator = self._generate_tables(**split_generator.gen_kwargs) │ │ 1150 │ │ with ArrowWriter(features=self.info.features, path=fpath) as writer: │ │ ❱ 1151 │ │ │ for key, table in logging.tqdm( │ │ 1152 │ │ │ │ generator, unit=" tables", leave=False, disable=True # not loggin │ │ 1153 │ │ │ ): │ │ 1154 │ │ │ │ writer.write_table(table) │ │ │ │ /home/tiankang/software/anaconda3/lib/python3.8/site-packages/tqdm/notebook.py:257 in │ │ __iter__ │ │ │ │ 254 │ │ │ 255 │ def __iter__(self): │ │ 256 │ │ try: │ │ ❱ 257 │ │ │ for obj in super(tqdm_notebook, self).__iter__(): │ │ 258 │ │ │ │ # return super(tqdm...) will not catch exception │ │ 259 │ │ │ │ yield obj │ │ 260 │ │ # NB: except ... [ as ...] breaks IPython async KeyboardInterrupt │ │ │ │ /home/tiankang/software/anaconda3/lib/python3.8/site-packages/tqdm/std.py:1183 in │ │ __iter__ │ │ │ │ 1180 │ │ # If the bar is disabled, then just walk the iterable │ │ 1181 │ │ # (note: keep this check outside the loop for performance) │ │ 1182 │ │ if self.disable: │ │ ❱ 1183 │ │ │ for obj in iterable: │ │ 1184 │ │ │ │ yield obj │ │ 1185 │ │ │ return │ │ │ │ /home/tiankang/software/anaconda3/lib/python3.8/site-packages/datasets/packaged_modules/j │ │ son/json.py:90 in _generate_tables │ │ │ │ 87 │ │ │ # If the file is one json object and if we need to look at the list of │ │ 88 │ │ │ if self.config.field is not None: │ │ 89 │ │ │ │ with open(file, encoding="utf-8") as f: │ │ ❱ 90 │ │ │ │ │ dataset = json.load(f) │ │ 91 │ │ │ │ │ │ 92 │ │ │ │ # We keep only the field we are interested in │ │ 93 │ │ │ │ dataset = dataset[self.config.field] │ │ │ │ /home/tiankang/software/anaconda3/lib/python3.8/json/__init__.py:293 in load │ │ │ │ 290 │ To use a custom ``JSONDecoder`` subclass, specify it with the ``cls`` │ │ 291 │ kwarg; otherwise ``JSONDecoder`` is used. │ │ 292 │ """ │ │ ❱ 293 │ return loads(fp.read(), │ │ 294 │ │ cls=cls, object_hook=object_hook, │ │ 295 │ │ parse_float=parse_float, parse_int=parse_int, │ │ 296 │ │ parse_constant=parse_constant, object_pairs_hook=object_pairs_hook, **kw) │ │ │ │ /home/tiankang/software/anaconda3/lib/python3.8/json/__init__.py:357 in loads │ │ │ │ 354 │ if (cls is None and object_hook is None and │ │ 355 │ │ │ parse_int is None and parse_float is None and │ │ 356 │ │ │ parse_constant is None and object_pairs_hook is None and not kw): │ │ ❱ 357 │ │ return _default_decoder.decode(s) │ │ 358 │ if cls is None: │ │ 359 │ │ cls = JSONDecoder │ │ 360 │ if object_hook is not None: │ │ │ │ /home/tiankang/software/anaconda3/lib/python3.8/json/decoder.py:337 in decode │ │ │ │ 334 │ │ containing a JSON document). │ │ 335 │ │ │ │ 336 │ │ """ │ │ ❱ 337 │ │ obj, end = self.raw_decode(s, idx=_w(s, 0).end()) │ │ 338 │ │ end = _w(s, end).end() │ │ 339 │ │ if end != len(s): │ │ 340 │ │ │ raise JSONDecodeError("Extra data", s, end) │ │ │ │ /home/tiankang/software/anaconda3/lib/python3.8/json/decoder.py:353 in raw_decode │ │ │ │ 350 │ │ │ │ 351 │ │ """ │ │ 352 │ │ try: │ │ ❱ 353 │ │ │ obj, end = self.scan_once(s, idx) │ │ 354 │ │ except StopIteration as err: │ │ 355 │ │ │ raise JSONDecodeError("Expecting value", s, err.value) from None │ │ 356 │ │ return obj, end │ ╰───────────────────────────────────────────────────────────────────────────────────────────╯ JSONDecodeError: Unterminated string starting at: line 85 column 20 (char 60051) ``` However, when I rename the `train.json.zip` to other names (like `training.json.zip`, or even to `train.json`), everything works fine; when I unzip the file to `train.json`, it works as well. ## Environment info ``` - `datasets` version: 2.1.0 - Platform: Linux-4.4.0-131-generic-x86_64-with-glibc2.10 - Python version: 3.8.5 - PyArrow version: 7.0.0 - Pandas version: 1.4.2 ```
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Fixes FrugalScore
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[ "Hi @lewtun, thanks for reporting.\r\n\r\nIt seems that our library fails at inferring the dtype of the columns:\r\n- `milestone`\r\n- `performed_via_github_app` \r\n\r\n(and assigns them `null` dtype)." ]
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There are two minor modifications in this PR: 1) `predictions` and `references` are swapped. Basically Frugalscore is commutative, however some tiny differences can occur if we swap the references and the predictions. I decided to swap them just to obtain the exact results as reported in the paper. 2) I switched to dynamic padding that was was used in the training, forcing the padding to `max_length` introduces errors for some reason that I ignore. @lhoestq
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Language code search does direct matches
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## Describe the bug Hi. Searching for bcp47 tags that are just the language prefix (e.g. `sq` or `da`) excludes datasets that have added extra information in their language metadata (e.g. `sq-AL` or `da-bornholm`). The example codes given in the [tagging app](https://huggingface.co/spaces/huggingface/datasets-tagging) encourages addition of the additional codes ("_expected format is BCP47 tags separated for ';' e.g. 'en-US;fr-FR'_") but this would lead to those datasets being hidden in datasets search. ## Steps to reproduce the bug 1. Add a dataset using a variant tag (e.g. [`sq-AL`](https://huggingface.co/datasets?languages=languages:sq-AL)) 2. Look for datasets using the full code 3. Note that they're missing when just the language is searched for (e.g. [`sq`](https://huggingface.co/datasets?languages=languages:sq)) Some datasets are already affected by this - e.g. `AmazonScience/massive` is listed under `sq-AL` but not `sq`. One workaround is for dataset creators to add an additional root language tag to dataset YAML metadata, but it's unclear how to communicate this. It might be possible to index the search on `languagecode.split('-')[0]` but I wanted to float this issue before trying to write any code :) ## Expected results Datasets using longer bcp47 tags also appear under searches for just the language code; e.g. Quebecois datasets (`fr-CA`) would come up when looking for French datasets with no region specification (`fr`), or US English (`en-US`) datasets would come up when searching for English datasets (`en`). ## Actual results The language codes seem to be directly string matched, excluding datasets with specific language tags from non-specific searches. ## Environment info (web app)
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Fix: Add missing comma
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Remove hacking license tags when mirroring datasets on the Hub
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Currently, when mirroring datasets on the Hub, the license tags are hacked: removed of characters "." and "$". On the contrary, this hacking is not applied to community datasets on the Hub. This generates multiple variants of the same tag on the Hub. I guess this hacking is no longer necessary: - it is not applied to community datasets - all canonical datasets are validated by maintainers before being merged: CI + maintainers make sure license tags are the right ones Fix #4298.
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This PR adds the ImageNet-Sketch dataset and resolves #3953 .
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Add API code examples for loading methods
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This PR adds API code examples for loading methods, let me know if I've missed any important parameters we should showcase :) I was a bit confused about `inspect_dataset` and `inspect_metric`. The `path` parameter says it will accept a dataset identifier from the Hub. But when I try the identifier `rotten_tomatoes`, it gives me: ```py from datasets import inspect_dataset inspect_dataset('rotten_tomatoes', local_path='/content/rotten_tomatoes') FileNotFoundError: Couldn't find a dataset script at /content/rotten_tomatoes/rotten_tomatoes.py or any data file in the same directory. ``` Does the user need to have an existing copy of `rotten_tomatoes.py` on their local drive (in which case, it seems like the same option as the first option in `path`)?
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Remove manual download from imagenet-1k
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Remove the manual download code from `imagenet-1k` to make it a regular dataset.
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Normalise license names
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**Is your feature request related to a problem? Please describe.** When browsing datasets, the Licenses tag cloud (bottom left of e.g. https://huggingface.co/datasets) has multiple variants of the same license. This means the options exclude datasets arbitrarily, giving users artificially low recall. The cause of the dupes is probably due to a bit of variation in metadata. **Describe the solution you'd like** I'd like the licenses in metadata to follow the same standard as much as possible, to remove this problem. I'd like to go ahead and normalise the dataset metadata to follow the format & values given in [src/datasets/utils/resources/licenses.json](https://github.com/huggingface/datasets/blob/master/src/datasets/utils/resources/licenses.json) . **Describe alternatives you've considered** None **Additional context** None **Priority** Low
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Datasets YAML tagging space is down
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## Describe the bug The neat hf spaces app for generating YAML tags for dataset `README.md`s is down ## Steps to reproduce the bug 1. Visit https://huggingface.co/spaces/huggingface/datasets-tagging ## Expected results There'll be a HF spaces web app for generating dataset metadata YAML ## Actual results There's an error message; here's the step where it breaks: ``` Step 18/29 : RUN pip install -r requirements.txt ---> Running in e88bfe7e7e0c Defaulting to user installation because normal site-packages is not writeable Collecting git+https://github.com/huggingface/datasets.git@update-task-list (from -r requirements.txt (line 4)) Cloning https://github.com/huggingface/datasets.git (to revision update-task-list) to /tmp/pip-req-build-bm8t0r0k Running command git clone --filter=blob:none --quiet https://github.com/huggingface/datasets.git /tmp/pip-req-build-bm8t0r0k WARNING: Did not find branch or tag 'update-task-list', assuming revision or ref. Running command git checkout -q update-task-list error: pathspec 'update-task-list' did not match any file(s) known to git error: subprocess-exited-with-error × git checkout -q update-task-list did not run successfully. │ exit code: 1 ╰─> See above for output. note: This error originates from a subprocess, and is likely not a problem with pip. error: subprocess-exited-with-error × git checkout -q update-task-list did not run successfully. │ exit code: 1 ╰─> See above for output. ``` ## Environment info - Platform: Linux / Brave
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Fix URL query parameters in compression hop path when streaming
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Fix #3488.
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Fix missing lz4 dependency for tests
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Currently, `lz4` is not defined as a dependency for tests. Therefore, all tests marked with `@require_lz4` are skipped.
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Fix CLI run_beam save_infos
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Currently, it raises TypeError: ``` TypeError: _download_and_prepare() got an unexpected keyword argument 'save_infos' ```
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Fix wrong map parameter name in cache docs
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The `load_from_cache` parameter of `map` should be `load_from_cache_file`.
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Add API code examples for remaining main classes
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This PR adds API code examples for the remaining functions in the Main classes. I wasn't too familiar with some of the functions (`decode_batch`, `decode_column`, `decode_example`, etc.) so please feel free to add an example of usage and I can fill in the rest :)
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Dataset Viewer issue for strombergnlp/ipm_nel : preview is empty, no error message
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### Link https://huggingface.co/datasets/strombergnlp/ipm_nel/viewer/ipm_nel/train ### Description The viewer is blank. I tried my best to emulate a dataset with a working viewer, but this one just doesn't seem to want to come up. What did I miss? ### Owner Yes
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Update README.md
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Updating readme in medmcqa dataset.
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Add missing `faiss` import to fix https://github.com/huggingface/datasets/issues/4287
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[ "Hi @lewtun, thanks for reporting.\r\n\r\nIt seems that our library fails at inferring the dtype of the columns:\r\n- `milestone`\r\n- `performed_via_github_app` \r\n\r\n(and assigns them `null` dtype)." ]
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This PR fixes the issue recently mentioned in https://github.com/huggingface/datasets/issues/4287 🤗
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"NameError: name 'faiss' is not defined" on `.add_faiss_index` when `device` is not None
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## Describe the bug When using `datasets` to calculate the FAISS indices of a dataset, the exception `NameError: name 'faiss' is not defined` is triggered when trying to calculate those on a device (GPU), so `.add_faiss_index(..., device=0)` fails with that exception. All that assuming that `datasets` is properly installed and `faiss-gpu` too, as well as all the CUDA drivers required. ## Steps to reproduce the bug ```python # Sample code to reproduce the bug from transformers import DPRContextEncoder, DPRContextEncoderTokenizer import torch torch.set_grad_enabled(False) ctx_encoder = DPRContextEncoder.from_pretrained("facebook/dpr-ctx_encoder-single-nq-base") ctx_tokenizer = DPRContextEncoderTokenizer.from_pretrained("facebook/dpr-ctx_encoder-single-nq-base") from datasets import load_dataset ds = load_dataset('crime_and_punish', split='train[:100]') ds_with_embeddings = ds.map(lambda example: {'embeddings': ctx_encoder(**ctx_tokenizer(example["line"], return_tensors="pt"))[0][0].numpy()}) ds_with_embeddings.add_faiss_index(column='embeddings', device=0) # default `device=None` ``` ## Expected results A new column named `embeddings` in the dataset that we're adding the index to. ## Actual results An exception is triggered with the following message `NameError: name 'faiss' is not defined`. ## Environment info - `datasets` version: 2.1.0 - Platform: Linux-5.13.0-1022-azure-x86_64-with-glibc2.31 - Python version: 3.9.12 - PyArrow version: 7.0.0 - Pandas version: 1.4.2
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Add Lahnda language tag
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[ "Hi @lewtun, thanks for reporting.\r\n\r\nIt seems that our library fails at inferring the dtype of the columns:\r\n- `milestone`\r\n- `performed_via_github_app` \r\n\r\n(and assigns them `null` dtype)." ]
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This language is present in [Wikimedia's WIT](https://huggingface.co/datasets/wikimedia/wit_base) dataset.
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[ "Hi @lewtun, thanks for reporting.\r\n\r\nIt seems that our library fails at inferring the dtype of the columns:\r\n- `milestone`\r\n- `performed_via_github_app` \r\n\r\n(and assigns them `null` dtype)." ]
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Update the leaderboard based on the latest results presented in the ACL 2022 version of the article.
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Issues in processing very large datasets
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## Describe the bug I'm trying to add a feature called "subgraph" to CNN/DM dataset (modifications on run_summarization.py of Huggingface Transformers script) --- I'm not quite sure if I'm doing it the right way, though--- but the main problem appears when the training starts where the error ` [OSError: [Errno 12] Cannot allocate memory]` appears. I suppose this problem roots in RAM issues and how the dataset is loaded during training, but I have no clue of what I can do to fix it. Observing the dataset's cache directory, I see that it takes ~600GB of memory and that's why I believe special care is needed when loading it into the memory. Here are my modifications to `run_summarization.py` code. ``` # loading pre-computed dictionary where keys are 'id' of article and values are corresponding subgraph graph_data_train = get_graph_data('train') graph_data_validation = get_graph_data('val') ... ... with training_args.main_process_first(desc="train dataset map pre-processing"): train_dataset = train_dataset.map( preprocess_function_train, batched=True, num_proc=data_args.preprocessing_num_workers, remove_columns=column_names, load_from_cache_file=not data_args.overwrite_cache, desc="Running tokenizer on train dataset", ) ``` And here is the modified preprocessed function: ``` def preprocess_function_train(examples): inputs, targets, sub_graphs, ids = [], [], [], [] for i in range(len(examples[text_column])): if examples[text_column][i] is not None and examples[summary_column][i] is not None: # if examples['doc_id'][i] in graph_data.keys(): inputs.append(examples[text_column][i]) targets.append(examples[summary_column][i]) sub_graphs.append(graph_data_train[examples['id'][i]]) ids.append(examples['id'][i]) inputs = [prefix + inp for inp in inputs] model_inputs = tokenizer(inputs, max_length=data_args.max_source_length, padding=padding, truncation=True, sub_graphs=sub_graphs, ids=ids) # Setup the tokenizer for targets with tokenizer.as_target_tokenizer(): labels = tokenizer(targets, max_length=max_target_length, padding=padding, truncation=True) # If we are padding here, replace all tokenizer.pad_token_id in the labels by -100 when we want to ignore # padding in the loss. if padding == "max_length" and data_args.ignore_pad_token_for_loss: labels["input_ids"] = [ [(l if l != tokenizer.pad_token_id else -100) for l in label] for label in labels["input_ids"] ] model_inputs["labels"] = labels["input_ids"] return model_inputs ``` ## Environment info <!-- You can run the command `datasets-cli env` and copy-and-paste its output below. --> - `datasets` version: 2.1.0 - Platform: Linux Ubuntu - Python version: 3.6 - PyArrow version: 6.0.1
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Fix filesystem docstring
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This PR untangles the `S3FileSystem` docstring so the [parameters](https://huggingface.co/docs/datasets/master/en/package_reference/main_classes#parameters) are properly displayed.
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Don't do unnecessary list type casting to avoid replacing None values by empty lists
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[ "Hi @lewtun, thanks for reporting.\r\n\r\nIt seems that our library fails at inferring the dtype of the columns:\r\n- `milestone`\r\n- `performed_via_github_app` \r\n\r\n(and assigns them `null` dtype)." ]
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In certain cases, `None` values are replaced by empty lists when casting feature types. It happens every time you cast an array of nested lists like [None, [0, 1, 2, 3]] to a different type (to change the integer precision for example). In this case you'd get [[], [0, 1, 2, 3]] for example. This issue comes from PyArrow, see the discussion in https://github.com/huggingface/datasets/issues/3676 This issue also happens when no type casting is needed, because casting is supposed to be a no-op in this case. But as https://github.com/huggingface/datasets/issues/3676 shown, it's not the case and `None` are replaced by empty lists even if we cast to the exact same type. In this PR I just workaround this bug in the case where no type casting is needed. In particular, I only call `pa.ListArray.from_arrays` only when necessary. I also added a warning when some `None` are effectively replaced by empty lists. I wanted to raise an error in this case, but maybe we should wait a major update to do so This PR fixes this particular case, that is occurring in `run_qa.py` in `transformers`: ```python from datasets import Dataset ds = Dataset.from_dict({"a": range(4)}) ds = ds.map(lambda x: {"b": [[None, [0]]]}, batched=True, batch_size=1, remove_columns=["a"]) print(ds.to_pandas()) # before: # b # 0 [None, [0]] # 1 [[], [0]] # 2 [[], [0]] # 3 [[], [0]] # # now: # b # 0 [None, [0]] # 1 [None, [0]] # 2 [None, [0]] # 3 [None, [0]] ``` cc @sgugger
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Remove a copy-paste sentence in dataset cards
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Remove the following copy-paste sentence from dataset cards: ``` We show detailed information for up to 5 configurations of the dataset. ```
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Add missing features to commonsense_qa dataset
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Fix partially #4275.
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Update the minimal PyArrow version warning (should've been part of #4250).
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Add missing features to openbookqa dataset for additional config
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Fix partially #4276.
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Enable label alignment for token classification datasets
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This PR extends the `Dataset.align_labels_with_mapping()` method to support alignment of label mappings between datasets and models for token classification (e.g. NER). Example of usage: ```python from datasets import load_dataset ner_ds = load_dataset("conll2003", split="train") # returns [3, 0, 7, 0, 0, 0, 7, 0, 0] ner_ds[0]["ner_tags"] # hypothetical model mapping with O <--> B-LOC label2id = { "B-LOC": "0", "B-MISC": "7", "B-ORG": "3", "B-PER": "1", "I-LOC": "6", "I-MISC": "8", "I-ORG": "4", "I-PER": "2", "O": "5" } ner_aligned_ds = ner_ds.align_labels_with_mapping(label2id, "ner_tags") # returns [3, 5, 7, 5, 5, 5, 7, 5, 5] ner_aligned_ds[0]["ner_tags"] ``` Context: we need this in AutoTrain to automatically align datasets / models during evaluation. cc @abhishekkrthakur
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OpenBookQA has missing and inconsistent field names
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## Describe the bug OpenBookQA implementation is inconsistent with the original dataset. We need to: 1. The dataset field [question][stem] is flattened into question_stem. Unflatten it to match the original format. 2. Add missing additional fields: - 'fact1': row['fact1'], - 'humanScore': row['humanScore'], - 'clarity': row['clarity'], - 'turkIdAnonymized': row['turkIdAnonymized'] 3. Ensure the structure and every data item in the original OpenBookQA matches our OpenBookQA version. ## Expected results The structure and every data item in the original OpenBookQA matches our OpenBookQA version. ## Actual results TBD ## Environment info - `datasets` version: 2.1.0 - Platform: macOS-10.15.7-x86_64-i386-64bit - Python version: 3.8.13 - PyArrow version: 7.0.0 - Pandas version: 1.4.2
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[ "Hi @lewtun, thanks for reporting.\r\n\r\nIt seems that our library fails at inferring the dtype of the columns:\r\n- `milestone`\r\n- `performed_via_github_app` \r\n\r\n(and assigns them `null` dtype)." ]
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## Describe the bug In short, CommonSenseQA implementation is inconsistent with the original dataset. More precisely, we need to: 1. Add the dataset matching "id" field. The current dataset, instead, regenerates monotonically increasing id. 2. The [“question”][“stem”] field is flattened into "question". We should match the original dataset and unflatten it 3. Add the missing "question_concept" field in the question tree node 4. Anything else? Go over the data structure of the newly repaired CommonSenseQA and make sure it matches the original ## Expected results Every data item of the CommonSenseQA should structurally and data-wise match the original CommonSenseQA dataset. ## Actual results TBD ## Environment info - `datasets` version: 2.1.0 - Platform: macOS-10.15.7-x86_64-i386-64bit - Python version: 3.8.13 - PyArrow version: 7.0.0 - Pandas version: 1.4.2
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This PR adds API code examples for `IterableDataset` and `IterableDatasetDicts`.
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This PR fixes #4271.
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## Describe the bug in the docs of V2.1.0 datasets.disable_progress_bar, we should replace "enable" with "disable".
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CI in PR: - #4259 was green, but after merging it to master, a code quality error appeared.
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Update metadata of big_patent dataset with: - license - point of contact
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error downloading bigscience-catalogue-lm-data/lm_en_wiktionary_filtered
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## Describe the bug Error generated when attempting to download dataset ## Steps to reproduce the bug ```python from datasets import load_dataset dataset = load_dataset("bigscience-catalogue-lm-data/lm_en_wiktionary_filtered") ``` ## Expected results A clear and concise description of the expected results. ## Actual results ``` ExpectedMoreDownloadedFiles Traceback (most recent call last) [<ipython-input-62-4ac5cf959477>](https://localhost:8080/#) in <module>() 1 from datasets import load_dataset 2 ----> 3 dataset = load_dataset("bigscience-catalogue-lm-data/lm_en_wiktionary_filtered") 3 frames [/usr/local/lib/python3.7/dist-packages/datasets/utils/info_utils.py](https://localhost:8080/#) in verify_checksums(expected_checksums, recorded_checksums, verification_name) 31 return 32 if len(set(expected_checksums) - set(recorded_checksums)) > 0: ---> 33 raise ExpectedMoreDownloadedFiles(str(set(expected_checksums) - set(recorded_checksums))) 34 if len(set(recorded_checksums) - set(expected_checksums)) > 0: 35 raise UnexpectedDownloadedFile(str(set(recorded_checksums) - set(expected_checksums))) ExpectedMoreDownloadedFiles: {'/home/leandro/catalogue_data/datasets/lm_en_wiktionary_filtered/data/file-01.jsonl.gz', '/home/leandro/catalogue_data/datasets/lm_en_wiktionary_filtered/data/file-01.jsonl.gz.lock'} ``` ## Environment info <!-- You can run the command `datasets-cli env` and copy-and-paste its output below. --> - `datasets` version: 1.18.3 - Platform: Linux-5.4.188+-x86_64-with-Ubuntu-18.04-bionic - Python version: 3.7.13 - PyArrow version: 6.0.1
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PR_kwDODunzps43LzOR
4,267
Replace data URL in SAMSum dataset within the same repository
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Replace data URL with one in the same repository.
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4,266
Add HF Speech Bench to Librispeech Dataset Card
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[ "Hi @lewtun, thanks for reporting.\r\n\r\nIt seems that our library fails at inferring the dtype of the columns:\r\n- `milestone`\r\n- `performed_via_github_app` \r\n\r\n(and assigns them `null` dtype)." ]
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Adds the HF Speech Bench to Librispeech Dataset Card in place of the Papers With Code Leaderboard. Should improve usage and visibility of this leaderboard! Wondering whether this can also be done for [Common Voice 7](https://huggingface.co/datasets/mozilla-foundation/common_voice_7_0) and [8](https://huggingface.co/datasets/mozilla-foundation/common_voice_8_0) through someone with permissions? cc @patrickvonplaten: more leaderboard promotion!
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PR_kwDODunzps43KLnD
4,263
Rename imagenet2012 -> imagenet-1k
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On the Hugging Face Hub, users refer to imagenet2012 (from #4178 ) as imagenet-1k in their model tags. To correctly link models to imagenet, we should rename this dataset `imagenet-1k`. Later we can add `imagenet-21k` as a new dataset if we want. Once this one is merged we can delete the `imagenet2012` dataset repository on the Hub. EDIT: to complete the rationale on why we should name it `imagenet-1k`: If users specifically added the tag `imagenet-1k` , then it could be for two reasons (not sure which one is predominant), either they - wanted to make it explicit that it’s not 21k -> the distinction is important for the community - or they have been following this convention from other models -> the convention implicitly exists already
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Add YAML tags to Dataset Card rotten tomatoes
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The dataset card for the rotten tomatoes / MR movie review dataset had some missing YAML tags. Hopefully, this also improves the visibility of this dataset now that paperswithcode and huggingface link to eachother.
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YAML Metadata Warning: empty or missing yaml metadata in repo card (https://huggingface.co/docs/hub/datasets-cards)

Dataset Summary

GitHub Issues is a dataset consisting of GitHub issues and pull requests associated with the 🤗 Datasets repository. It is intended for educational purposes and can be used for semantic search or multilabel text classification. The contents of each GitHub issue are in English and concern the domain of datasets for NLP, computer vision, and beyond.

Supported Tasks and Leaderboards

For each of the tasks tagged for this dataset, give a brief description of the tag, metrics, and suggested models (with a link to their HuggingFace implementation if available). Give a similar description of tasks that were not covered by the structured tag set (repace the task-category-tag with an appropriate other:other-task-name).

  • task-category-tag: The dataset can be used to train a model for [TASK NAME], which consists in [TASK DESCRIPTION]. Success on this task is typically measured by achieving a high/low metric name. The (model name or model class) model currently achieves the following score. [IF A LEADERBOARD IS AVAILABLE]: This task has an active leaderboard which can be found at leaderboard url and ranks models based on metric name while also reporting other metric name.

Languages

Provide a brief overview of the languages represented in the dataset. Describe relevant details about specifics of the language such as whether it is social media text, African American English,...

When relevant, please provide BCP-47 codes, which consist of a primary language subtag, with a script subtag and/or region subtag if available.

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