I've updated the following packages:


- ~~chore: update lxml to 4.8.0~~
- chore: update MarkupSafe to 2.1.0
- chore: update astropy to 5.0.1
- chore: update logbook to 1.5.3
- chore: update regex to 2022.1.18
- chore: update sqlalchemy to 1.4.31
- chore: updated cffi to 1.15.0
- chore: updated imageio to 2.16.1
- chore: updated setuptools to 60.9.3
- chore: updated pytest to 7.0.1
- chore: updated typing-extensions to 4.1.1
- chore: updated pyrsistent to 0.18.1
- chore: updated threadpoolctl to 3.1.0

I wasn't sure how caching was done (if I update numpy, etc. all at once will
that blow up the CI build time?), and I'm hoping to avoid failures, so I left
the big or patched ones alone. Was after lxml (see #2225), but thought I'd get a couple other ones while at it. Removed it, having an issue so will be bumped separately.

* matplotlib 3.3.3 ❌ -> 3.5.1
* nltk 3.6.7 ❌ -> 3.7
* numpy 1.21.4 ❌ -> 1.22.2
* pandas 1.3.5 ❌ -> 1.4.1
* pillow 9.0.0 ❌ -> 9.0.1
* pyrsistent 0.18.0 ❌ -> 0.18.1
* python-sat 0.1.7.dev15 ❌ -> 0.1.7.dev16
* scikit-image 0.19.1 ❌ -> 0.19.2
* scipy 1.7.3 ❌ -> 1.8.0
* statsmodels 0.13.1 ❌ -> 0.13.2
* swiglpk 5.0.3 ❌ -> 5.0.4
* yt 3.6.1 ❌ -> 4.0.2
* zarr 2.10.3 ❌ -> 2.11.0

chore: some package updates. I've updated the following packages:


- ~~chore: update lxml to 4.8.0~~
- chore: update MarkupSafe to 2.1.0
- chore: update astropy to 5.0.1
- chore: update logbook to 1.5.3
- chore: update regex to 2022.1.18
- chore: update sqlalchemy to 1.4.31
- chore: updated cffi to 1.15.0
- chore: updated imageio to 2.16.1
- chore: updated setuptools to 60.9.3
- chore: updated pytest to 7.0.1
- chore: updated typing-extensions to 4.1.1
- chore: updated pyrsistent to 0.18.1
- chore: updated threadpoolctl to 3.1.0

I wasn't sure how caching was done (if I update numpy, etc. all at once will
that blow up the CI build time?), and I'm hoping to avoid failures, so I left
the big or patched ones alone. Was after lxml (see #2225), but thought I'd get a couple other ones while at it. Removed it, having an issue so will be bumped separately.

* matplotlib 3.3.3 ❌ -> 3.5.1
* nltk 3.6.7 ❌ -> 3.7
* numpy 1.21.4 ❌ -> 1.22.2
* pandas 1.3.5 ❌ -> 1.4.1
* pillow 9.0.0 ❌ -> 9.0.1
* pyrsistent 0.18.0 ❌ -> 0.18.1
* python-sat 0.1.7.dev15 ❌ -> 0.1.7.dev16
* scikit-image 0.19.1 ❌ -> 0.19.2
* scipy 1.7.3 ❌ -> 1.8.0
* statsmodels 0.13.1 ❌ -> 0.13.2
* swiglpk 5.0.3 ❌ -> 5.0.4
* yt 3.6.1 ❌ -> 4.0.2
* zarr 2.10.3 ❌ -> 2.11.0

From 7b56e1341c486422973dfa890158872200527b51 Mon Sep 17 00:00:00 2001
From: Hood Chatham <roberthoodchatham@gmail.com>
Date: Sat, 25 Dec 2021 20:31:40 -0800
Subject: [PATCH] Remove cuncsd, dorcsd, sorcsd, zuncsd

These functions don't work because their definitions involve code that isn't 
fortran 77 compliant. In order to get _flapack.so to link correctly, we need
to provide stub definitions for these functions, but they don't work. Remove
them to make sure people get an `AttributeError` if they try to use them 
rather than just having weird buggy code.

---
 scipy/linalg/__init__.py | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/scipy/linalg/__init__.py b/scipy/linalg/__init__.py
index e88479b48..746bf3dce 100644
--- a/scipy/linalg/__init__.py
+++ b/scipy/linalg/__init__.py
@@ -191,6 +191,12 @@ Low-level routines
    `scipy.linalg.cython_lapack` -- Low-level LAPACK functions for Cython
 
 """  # noqa: E501
+from . import lapack
+del lapack.cuncsd
+del lapack.dorcsd
+del lapack.sorcsd
+del lapack.zuncsd
+del lapack
 
 from .misc import *
 from .basic import *
-- 
2.25.1


From 7b56e1341c486422973dfa890158872200527b51 Mon Sep 17 00:00:00 2001
From: Hood Chatham <roberthoodchatham@gmail.com>
Date: Sat, 25 Dec 2021 20:31:40 -0800
Subject: [PATCH] Remove cuncsd, dorcsd, sorcsd, zuncsd

These functions don't work because their definitions involve code that isn't 
fortran 77 compliant. In order to get _flapack.so to link correctly, we need
to provide stub definitions for these functions, but they don't work. Remove
them to make sure people get an `AttributeError` if they try to use them 
rather than just having weird buggy code.

---
 scipy/linalg/__init__.py | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/scipy/linalg/__init__.py b/scipy/linalg/__init__.py
index e88479b48..746bf3dce 100644
--- a/scipy/linalg/__init__.py
+++ b/scipy/linalg/__init__.py
@@ -191,6 +191,12 @@ Low-level routines
    `scipy.linalg.cython_lapack` -- Low-level LAPACK functions for Cython
 
 """  # noqa: E501
+from . import lapack
+del lapack.cuncsd
+del lapack.dorcsd
+del lapack.sorcsd
+del lapack.zuncsd
+del lapack
 
 from .misc import *
 from .basic import *
-- 
2.25.1

