# Path: molmod/units.py
# def parse_unit(expression):
# 
# Path: molmod/io/common.py
# class SlicedReader(object):
#     """Base class for readers that can read a slice of all the frames"""
# 
#     def __init__(self, f, sub=slice(None)):
#         """
#            Argument:
#             | ``f``  --  a filename or a file-like object
# 
#            Optional argument:
#             | ``sub``  --  a slice indicating which frames to read/skip
# 
#         """
#         if isinstance(f, basestring):
#             self._auto_close = True
#             self._f = open(f)
#         else:
#             self._auto_close = False
#             self._f = f
#         self._sub = sub
#         self._counter = 0
# 
#     def __del__(self):
#         """Clean up the open file"""
#         if self._auto_close:
#             self._f.close()
# 
#     def _read_frame(self):
#         """Read a single frame from the trajectory"""
#         raise NotImplementedError
# 
#     def _skip_frame(self):
#         """Skip a single frame from the trajectory"""
#         raise NotImplementedError
# 
#     def __iter__(self):
#         return self
# 
#     def __next__(self):
#         """Get the next frame from the file, taking into account the slice
# 
#            This method is part of the iterator protocol.
#         """
#         # skip frames as requested
#         while not slice_match(self._sub, self._counter):
#             self._skip_frame()
#             self._counter += 1
# 
#         result = self._read_frame()
#         self._counter += 1
#         return result


import numpy as np
from molmod.units import picosecond, angstrom, kcalmol
from molmod.io.common import SlicedReader
            raise StopIteration
        return self._last[:self._last.find(":")]

    def _skip_section(self):
        """Skip a section"""
        self._last = self._f.readline()
        while len(self._last) > 0 and len(self._last[0].strip()) == 0:
            self._last = self._f.readline()

    def _read_section(self):
        """Read and return an entire section"""
        lines = [self._last[self._last.find(":")+1:]]
        self._last = self._f.readline()
        while len(self._last) > 0 and len(self._last[0].strip()) == 0:
            lines.append(self._last)
            self._last = self._f.readline()
        return lines

    def get_next(self, label):
        """Get the next section with the given label"""
        while self._get_current_label() != label:
            self._skip_section()
        return self._read_section()


class ATRJFrame(object):
    """A single time frame from an ATRJ file"""
    pass



# Path: molmod/units.py
# def parse_unit(expression):
# 
# Path: molmod/io/common.py
# class SlicedReader(object):
#     """Base class for readers that can read a slice of all the frames"""
# 
#     def __init__(self, f, sub=slice(None)):
#         """
#            Argument:
#             | ``f``  --  a filename or a file-like object
# 
#            Optional argument:
#             | ``sub``  --  a slice indicating which frames to read/skip
# 
#         """
#         if isinstance(f, basestring):
#             self._auto_close = True
#             self._f = open(f)
#         else:
#             self._auto_close = False
#             self._f = f
#         self._sub = sub
#         self._counter = 0
# 
#     def __del__(self):
#         """Clean up the open file"""
#         if self._auto_close:
#             self._f.close()
# 
#     def _read_frame(self):
#         """Read a single frame from the trajectory"""
#         raise NotImplementedError
# 
#     def _skip_frame(self):
#         """Skip a single frame from the trajectory"""
#         raise NotImplementedError
# 
#     def __iter__(self):
#         return self
# 
#     def __next__(self):
#         """Get the next frame from the file, taking into account the slice
# 
#            This method is part of the iterator protocol.
#         """
#         # skip frames as requested
#         while not slice_match(self._sub, self._counter):
#             self._skip_frame()
#             self._counter += 1
# 
#         result = self._read_frame()
#         self._counter += 1
#         return result


# Path: molmod/io/atrj.py
import numpy as np
from molmod.units import picosecond, angstrom, kcalmol
from molmod.io.common import SlicedReader

            raise StopIteration
        return self._last[:self._last.find(":")]

    def _skip_section(self):
        """Skip a section"""
        self._last = self._f.readline()
        while len(self._last) > 0 and len(self._last[0].strip()) == 0:
            self._last = self._f.readline()

    def _read_section(self):
        """Read and return an entire section"""
        lines = [self._last[self._last.find(":")+1:]]
        self._last = self._f.readline()
        while len(self._last) > 0 and len(self._last[0].strip()) == 0:
            lines.append(self._last)
            self._last = self._f.readline()
        return lines

    def get_next(self, label):
        """Get the next section with the given label"""
        while self._get_current_label() != label:
            self._skip_section()
        return self._read_section()


class ATRJFrame(object):
    """A single time frame from an ATRJ file"""
    pass



class ATRJReader(SlicedReader):