README.md

metadata

title: README
emoji: 👁
colorFrom: indigo
colorTo: purple
sdk: static
pinned: false

FHIR - CT - Graph

FHIR:

https://huggingface.co/spaces/awacke1/Clinical-Terminology-FHIR-Assessment https://huggingface.co/spaces/awacke1/SMART-FHIR-Assessment-Observation-SDKs https://huggingface.co/spaces/awacke1/SMART-FHIR-Kits-SDC-HL7 https://huggingface.co/spaces/awacke1/SMART-FHIR-Assessment-Blood-Pressure https://huggingface.co/spaces/awacke1/SMART-FHIR-Assessment-Exercise

Clinical Terminology:

https://huggingface.co/spaces/awacke1/Ontology-Gradio https://huggingface.co/spaces/awacke1/Biomed-NLP-AI-Clinical-Terminology https://huggingface.co/spaces/awacke1/ClinicalTerminologyNER-Refactored https://huggingface.co/spaces/awacke1/ClinicalTerminologyAISearch https://huggingface.co/spaces/awacke1/ClinicalTerminologyAISearch1215

Graph, Clinical Terminology, FHIR Apps and Services:

https://huggingface.co/spaces/awacke1/Git-GPG-Git-Actions-01-GraphViz https://huggingface.co/spaces/awacke1/Dice-Roll-Treemap-Plotly https://huggingface.co/spaces/awacke1/GraphVis3 https://huggingface.co/spaces/awacke1/GraphViz-Demo https://huggingface.co/spaces/awacke1/StreamlitGraphViz https://huggingface.co/spaces/awacke1/CardGameActivity-GraphViz

CP Matplotlib, NetworkX, Streamlit, PyVis, st-click0detector, graphviz:

https://huggingface.co/spaces/awacke1/CPVisGraph

OMS and LOCUS:

https://huggingface.co/spaces/awacke1/NLPGraphOMSandLOCUS

Technical Architecture - Open Source Graph ML Libraries:

NetworkX: https://networkx.org/ PyTorch GNN: https://github.com/microsoft/ptgnn Jraph: https://github.com/deepmind/jraph Spektral: https://graphneural.network/ Graph Nets: https://github.com/deepmind/graph_nets Deep Graph Library (DGL): https://github.com/dmlc PyTorch Geometric: https://github.com/pyg-team/pytorch_geometric

Provider Graph - Maps of Hospitals

https://huggingface.co/spaces/awacke1/MN.Map.Hospitals.Top.Five

MediaPipe

A cross language SDK for AI that is real time, 3d, camera responsive, and on any device for nearly any language

Vision

Natural Language

Audio

Mediapipe has fast and flexible AI/ML pipelines. Examples with Javascript Links!

1. Image Classifier: https://mediapipe-studio.webapps.google.com/demo/image_classifier
2. Object Detector: https://mediapipe-studio.webapps.google.com/demo/object_detector
3. Text Classification: https://mediapipe-studio.webapps.google.com/demo/text_classifier
4. Gesture Recognizer: https://mediapipe-studio.webapps.google.com/demo/gesture_recognizer
5. Hand Landmark Detection: https://mediapipe-studio.webapps.google.com/demo/hand_landmarker
6. Audio Classifier: https://mediapipe-studio.webapps.google.com/demo/audio_classifier

Get started with just Javascript!! Getting Started: https://google.github.io/mediapipe/getting_started/javascript.html

Javascript Solutions - Ready to Demo:

1. Face Mesh: https://codepen.io/mediapipe/full/KKgVaPJ
2. Face Detection: https://codepen.io/mediapipe/full/dyOzvZM
3. Hands: https://codepen.io/mediapipe/full/RwGWYJw
4. Face, Hands, Body: https://codepen.io/mediapipe/full/LYRRYEw
5. Objectron: https://codepen.io/mediapipe/full/BaWvzdY
6. Full Skeletal Pose: https://codepen.io/mediapipe/full/jOMbvxw
7. Self Segmentation From Background: https://codepen.io/mediapipe/full/wvJyQpq

Mermaid Model for Core NLP Tasks:

graph LR;
    A[Reader]-->B[Classifier];
    A-->C[Retriever];
    A-->D[Summarizer];
    B-->E[Ranker];
    B-->F[Query Classifier];
    D-->G[Generator];
    F-->H[Question Generator];
    H-->G;
    I[File Converter]-->J[Preprocessor];
    J-->A;
    I-->C;
    K[Snowflake]-->B;
    L[Oracle]-->B;
    M[Pandas CSV]-->A;
    N[Index]-->C;
    N-->E;
    O[Query with Filters]-->F;
    P[Evaluation]-->E;
    P-->F;
    Q[Retraining]-->B;
    Q-->E;
    R[Annotation]-->B;

Core NLP Task Model for QA

Tasks:

1. Reader
2. Summarizer
3. Classifier
4. Retriever
5. Ranker
6. Query Classifier
7. Question Generator
8. Generator

Connectors:

1. File Converter
2. Preprocessor
3. Snowflake
4. Oracle
5. Pandas CSV

Supported Workflow:

1. Index
2. Query with Filters
3. Evaluation
4. Retraining
5. Annotation

Assess Topic	Assess Metric	Code Emoji	Code Topic	Code Type	Code
Childhood Immunization	% of children immunized by age two	🧒💉	Clinical Code	ICD10	Z28.2
Breast Cancer Screening	% of women with mammogram in past 2 yrs	🩺🎀	Clinical Code	CPT	77067
Colorectal Cancer Screening	% of adults screened for colorectal cancer	🩺💩	Clinical Code	CPT	82274
Comprehensive Diabetes Care	% of diabetic patients who had all recommended tests	🩺🩹	Clinical Code	LOINC	4548-4
Controlling High Blood Pressure	% of patients with controlled blood pressure	🩺💊	Clinical Code	ICD10	I10
Medication Management for Asthma	% of asthma patients with proper meds	💊🌬️	Clinical Code	SNOMED	195967001
Follow-up After Mental Illness Hospitalization	% of patients with follow-up care	🩺🏥	Clinical Code	HCPCS	G0181
Prenatal & Postpartum Care	% of pregnant women with proper care	🤰🩺	Clinical Code	ICD10	Z34
Comprehensive Eye Exam	% of diabetic patients with eye exam	🩺👀	Clinical Code	CPT	92014
Childhood Weight Assessment	% of children with BMI assessment	🧒📏	Clinical Code	ICD10	Z00.121
Chlamydia Screening in Women	% of sexually active women screened	🩺👩	Clinical Code	CPT	87491
Avoidance of Antibiotic Treatment for Acute Bronchitis	% of patients without antibiotics	🩺💊	Clinical Code	ICD10	J20.9
Osteoporosis Management in Women	% of women with bone density test	🩺💪	Clinical Code	CPT	77080
Use of High-Risk Medications in the Elderly	% of elderly with safe meds	💊👴👵	Clinical Code	HCPCS	G9612
Diabetes Screening for Schizophrenia or Bipolar Disorder	% of patients with mental illness screened	🧠🩺	Clinical Code	SNOMED	169609005
All-Cause Readmissions	% of patients readmitted within 30 days	🩺🏥	Clinical Code	ICD10	Z51.5
Antidepressant Medication Management	% of depressed patients with proper meds & follow-up	🩺🧠	Clinical Code	CPT	96127
Follow-up Care for Children Prescribed ADHD Medication	% of children with follow-up care	🩺🧒	Clinical Code	ICD10	F90
Imaging Studies for Low Back Pain	% of patients without imaging studies	🩺📊	Clinical Code	ICD10	M54.5
Spirometry Testing for COPD	% of COPD patients with spirometry testing	🩺🫁	Clinical Code	CPT	94010