metadata

license: mit
tags:
  - biology

Model Details

Model Description

Developed by: [More Information Needed]
Order the SARS Cov2 sequences by environmental changes, mainly the rate of change of the sunshine duration.

Model Sources [optional]

Repository: More Information Needed
Paper : Applications of sliding sampling
Demo : Kaggle

Uses

Classificaion of the SARS-Cov2 sequences and determination of mutational hotspots.

How to Get Started with the Model

Demo : Kaggle

Training Details

Training Data and test data

Stacked frequence of k-mers up to the 4-mer obtained from full size SARS-Cov2 sequences. NCBI sequence ID of each sequence for each fold is on the csvfile

Model Architecture and Objective

MLP VAE and mse loss

Demo : Kaggle

Hardware

GPU NVIDIA Corporation TU116 [GeForce GTX 1660 Ti]

More Information [optional]

Further details at Substack